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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2709153..2712169+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012146-T1 ID=KJC3_012146-T1|Name=KJC3_012146-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3017bp|location=Sequence derived from alignment at ch8:2709153..2712169+ (Aspergillus niger KJC3)
ACTGGAACCCGGCTGACCGAGCACCCACTTGGCTTACGGTCGAGCCAGTC
GCGTTTGGTGCCAGAAGGAGAAAATTAGCCGCCCTGCGATCCCCAGCAGA
GCACACCGATTCGCCCAAAACAGCTAATTGAGACAGTCATTTTTTCCTGT
GCTTTGCTTAACGCCGGTGATTTTTCCAGTGGACGAACCCTTTATCCAGA
CTTAGTGTTCAATTTCTCTGAATCACTTCCTTTCCTCTTACTCTTCTCTT
TCCCACCCACTCTCCACTCTCCCCTCCTCCCCCATTCCCTCTGCCTTTTG
GCTCAGGTGCGACTACCGCCCGACAATGGTTGGAAGTACGCTGGCGATCC
GCTCCAAGATGGCCTCTCCCTCCGCCGCCATGCAGTTGTCGTCGCTGTCG
CGCAGGTCGCTTTCGACGCGACCCCAGCTCCTTCGCTCCGCACGTCCCTT
GAGACAGCAGCAATTCCAGCGCTCTACTCGTCGCTCCTACGCCGATGCTG
CGCCCGCTGCCCCGACCCCCAAGCCCAAGAAGCGCTTCAGGTTCTTGCGC
TGGACCTGGCGCCTGACCTGGCTCTCCACTATCGGTGCGGCTGGTGCTCT
GGCCTACAGTGTCTATGAATTGCGCCATCCCGTCGAGCAGATCAAGCCTG
ATCCGACGAAGAAGACCCTTGTTATCCTGGGTAGGTTTCTTGCACCCTGT
GTCGCTTATCGCGACACGATCGCGGCCGAACAGCAACTTACGAGTCATTT
CCCAATCCAGGTACCGGATGGGGTACTGTTTCCCTGCTGAAGAAGCTCGA
CACTGAGAATTACAATGTTGTCGTCATCTCTCCTCGCAACTACTTCCTTT
TCACTCCCCTCCTCCCCTCCTGCACGACTGGTTTGATCGAGCACCGCTCC
ATCATGGAGCCGATCCGTAACATCCTCCGTCAGAAGACCGCCCACGTGAA
CTTCTACGAAGCCGAAGCCACCAAGATCGACTACGAAAAGCGTGTCGTGT
ACATCAGCGATGACTCTGAGATCAAGGGAGACATCTCCCACACCGAGGTG
CCCTTCGACATGCTTGTCGTTGGTGTCGGTGCTGAAAACGCAACCTTCGG
TATGTATTCATTGCTCACGCCCGCCATGGATTTCAATCTAACAATCACTA
GGTATCCCCGGTGTCCGGGAGAACTCCTGCTTCCTGAAGGAGGTCGACGA
TGCTCAGAAGATCCGCAAGCGCATCATGGACTGCATTGAGACTGCCATGT
TCAAGGACCAGACTGAAGACGAAGTCAAGCGTCTTCTCCACATGGTTGTT
GTTGGCGGTGGCCCGACTGGTGTCGAGTTCGCCGGTGAGCTGCAGGACTT
CTTCGAGGACGACTTGAAGAAGTGGGTTCCTGAGATCCAGGAGAACTTCA
AGGTTACCCTCGTTGAAGCTCTTCCCAACGTCCTTCCCATGTTCTCCAAG
CAGCTTATCGACTACACCGAATCGACTTTCAAGGAGGAGAAGATCTCTAT
CCGCGCAAAGACTATGGTCAAGAACGTCACCGACAAGTACATCGAGGCTA
TGGTTACCAACCCTGATGGATCCAAGTCCATCGAACGTATTCCCTACGGT
CTGCTGGTCTGGGCTACCGGTAACGCTGTTCGCCCCGTGGTTCGCGATCT
GATGAACCAGCTCCCTGCCCAGAAGGACTCGCGTCGTGGTCTTGCTGTGA
ACGAGTACCTCGTCGTGAACGGCGCTGAGAACGTCTGGGCTGTTGGTGAT
TGTGCTATCACCAACTACGCCCCTACTGCTCAGGTTGCCAGTCAGGAGGG
TGCTTTCCTTGCCCGTCTTTTCAACACCATGGCCAAGACCGAGGCTATCG
AGAAGGAGTTGAAGCAGCTGTCTGAGGCCCAGGCCCAGGCTAAGGGTGAG
GAGCGTGACCAGGTCTTTGACGCAATCCGCGAACGCCAGAAGCAGCTGCG
GAGAACCAAGCAGATTGGTCCCTTCCAGTACTCCCACCAGGGTAGCATGG
CCTACATCGGAAAGGAGCGCGCTGTTGCGGACATCAGCTGGCTGAGCGGC
AACATCGCCAGTGGTGGTACCATGACCTACCTCTTCTGGCGCAGTGCTTA
CCTGAGCATGTGCTTCAGCAGTAAGTAACCCTTTATTTGACTGTTAGTGC
AACTGTGTGATTTTAACTGACATTAATTACAGCTCGCAACCGTGTCCTGG
TCGCCGTTGACTGGATCAAGGCCAAGCTGTTTGGCCGCGACGTCTCTCGG
GAGTAAATCCTTCAATAAAACCTTTGGAAACTCTGTATCACCATCAGCAG
ACATGCTACGTCCATGATTTCGAAGCGATAACCCCTCTTTTATCATTGAA
TTTCGTCTCTTGTTCATTCTTCTTTTCCTCACCCCCTTCCTTGACGCCAC
TCAAATGACCATCCTCTTCCCTGACCTAAATGGGAGCCCCCATTGTCTGT
CACACGTTGCTCCTACGGAGCATCCAATGACGATCAAAAGAGCACACTAA
ACCAAGACGCTCTGCCGTGATTTATTGCAGCGTCTTTAATGGGTGACTCT
ATTAAAAGCGCACATAGATCACTTGATCATCATTCATTCGTCTTTTGTTT
CTTTCCCTGTACGAAATAGATAGACCGGGTTCGGGTTACTGTTTAGACAT
GCTAGATTTGGCCATAATTTTTCTTTGTGCTGTTTCTCTTTTTCCAATAC
ATTCTTCCTATTAACTTTCTCTGTTTTTGCTTCCTATTCATCCTCATAAT
TTGGGTCTTATTCTCTTCTATATATTTCGTTTCACTCCGAAAATGGGTTT
GTTCGATTGTACACTCTGCTGACTTGTATTGGTACTGGTATTTGTATGCT
TATTGGCGGGTTATTGGTCACATTAATGCCAAATTGTTTGTATCTTCATA
TATGAATACTCGCTATTTTATCTCGTGTATTCGGAATTTAACGTCTCAAG
TACGATATTCATCAGGCTGTTCTCCCTACAGACACGTTTGACTGTAGGCA
TACGTGGAGTAGCATCC back to topCoding sequence (CDS) from alignment at ch8:2709153..2712169+ >KJC3_012146-T1 ID=KJC3_012146-T1|Name=KJC3_012146-T1|organism=Aspergillus niger KJC3|type=CDS|length=6948bp|location=Sequence derived from alignment at ch8:2709153..2712169+ (Aspergillus niger KJC3)
ATGGTTGGAAGTACGCTGGCGATCCGCTCCAAGATGGCCTCTCCCTCCGC
CGCCATGCAGTTGTCGTCGCTGTCGCGCAGGTCGCTTTCGACGCGACCCC
AGCTCCTTCGCTCCGCACGTCCCTTGAGACAGCAGCAATTCCAGCGCTCT
ACTCGTCGCTCCTACGCCGATGCTGCGCCCGCTGCCCCGACCCCCAAGCC
CAAGAAGCGCTTCAGGTTCTTGCGCTGGACCTGGCGCCTGACCTGGCTCT
CCACTATCGGTGCGGCTGGTGCTCTGGCCTACAGTGTCTATGAATTGCGC
CATCCCGTCGAGCAGATCAAGCCTGATCCGACGAAGAAGACCCTTGTTAT
CCTGGGTACCGGATGGGGTACTGTTTCCCTGCTGAAGAAGCTCGACACTG
AGAATTACAATGTTGTCGTCATCTCTCCTCGCAACTACTTCCTTTTCACT
CCCCTCCTCCCCTCCTGCACGACTGGTTTGATCGAGCACCGCTCCATCAT
GGAGCCGATCCGTAACATCCTCCGTCAGAAGACCGCCCACGTGAACTTCT
ACGAAGCCGAAGCCACCAAGATCGACTACGAAAAGCGTGTCGTGTACATC
AGCGATGACTCTGAGATCAAGGGAGACATCTCCCACACCGAGGTGCCCTT
CGACATGCTTGTCGTTGGTGTCGGTGCTGAAAACGCAACCTTCGGTATCC
CCGGTGTCCGGGAGAACTCCTGCTTCCTGAAGGAGGTCGACGATGCTCAG
AAGATCCGCAAGCGCATCATGGACTGCATTGAGACTGCCATGTTCAAGGA
CCAGACTGAAGACGAAGTCAAGCGTCTTCTCCACATGGTTGTTGTTGGCG
GTGGCCCGACTGGTGTCGAGTTCGCCGGTGAGCTGCAGGACTTCTTCGAG
GACGACTTGAAGAAGTGGGTTCCTGAGATCCAGGAGAACTTCAAGGTTAC
CCTCGTTGAAGCTCTTCCCAACGTCCTTCCCATGTTCTCCAAGCAGCTTA
TCGACTACACCGAATCGACTTTCAAGGAGGAGAAGATCTCTATCCGCGCA
AAGACTATGGTCAAGAACGTCACCGACAAGTACATCGAGGCTATGGTTAC
CAACCCTGATGGATCCAAGTCCATCGAACGTATTCCCTACGGTCTGCTGG
TCTGGGCTACCGGTAACGCTGTTCGCCCCGTGGTTCGCGATCTGATGAAC
CAGCTCCCTGCCCAGAAGGACTCGCGTCGTGGTCTTGCTGTGAACGAGTA
CCTCGTCGTGAACGGCGCTGAGAACGTCTGGGCTGTTGGTGATTGTGCTA
TCACCAACTACGCCCCTACTGCTCAGGTTGCCAGTCAGGAGGGTGCTTTC
CTTGCCCGTCTTTTCAACACCATGGCCAAGACCGAGGCTATCGAGAAGGA
GTTGAAGCAGCTGTCTGAGGCCCAGGCCCAGGCTAAGGGTGAGGAGCGTG
ACCAGGTCTTTGACGCAATCCGCGAACGCCAGAAGCAGCTGCGGAGAACC
AAGCAGATTGGTCCCTTCCAGTACTCCCACCAGGGTAGCATGGCCTACAT
CGGAAAGGAGCGCGCTGTTGCGGACATCAGCTGGCTGAGCGGCAACATCG
CCAGTGGTGGTACCATGACCTACCTCTTCTGGCGCAGTGCTTACCTGAGC
ATGTGCTTCAGCACTCGCAACCGTGTCCTGGTCGCCGTTGACTGGATCAA
GGCCAAGCTGTTTGGCCGCGACGTCTCTCGGGAGTAAATGGTTGGAAGTA
CGCTGGCGATCCGCTCCAAGATGGCCTCTCCCTCCGCCGCCATGCAGTTG
TCGTCGCTGTCGCGCAGGTCGCTTTCGACGCGACCCCAGCTCCTTCGCTC
CGCACGTCCCTTGAGACAGCAGCAATTCCAGCGCTCTACTCGTCGCTCCT
ACGCCGATGCTGCGCCCGCTGCCCCGACCCCCAAGCCCAAGAAGCGCTTC
AGGTTCTTGCGCTGGACCTGGCGCCTGACCTGGCTCTCCACTATCGGTGC
GGCTGGTGCTCTGGCCTACAGTGTCTATGAATTGCGCCATCCCGTCGAGC
AGATCAAGCCTGATCCGACGAAGAAGACCCTTGTTATCCTGGGTACCGGA
TGGGGTACTGTTTCCCTGCTGAAGAAGCTCGACACTGAGAATTACAATGT
TGTCGTCATCTCTCCTCGCAACTACTTCCTTTTCACTCCCCTCCTCCCCT
CCTGCACGACTGGTTTGATCGAGCACCGCTCCATCATGGAGCCGATCCGT
AACATCCTCCGTCAGAAGACCGCCCACGTGAACTTCTACGAAGCCGAAGC
CACCAAGATCGACTACGAAAAGCGTGTCGTGTACATCAGCGATGACTCTG
AGATCAAGGGAGACATCTCCCACACCGAGGTGCCCTTCGACATGCTTGTC
GTTGGTGTCGGTGCTGAAAACGCAACCTTCGGTATCCCCGGTGTCCGGGA
GAACTCCTGCTTCCTGAAGGAGGTCGACGATGCTCAGAAGATCCGCAAGC
GCATCATGGACTGCATTGAGACTGCCATGTTCAAGGACCAGACTGAAGAC
GAAGTCAAGCGTCTTCTCCACATGGTTGTTGTTGGCGGTGGCCCGACTGG
TGTCGAGTTCGCCGGTGAGCTGCAGGACTTCTTCGAGGACGACTTGAAGA
AGTGGGTTCCTGAGATCCAGGAGAACTTCAAGGTTACCCTCGTTGAAGCT
CTTCCCAACGTCCTTCCCATGTTCTCCAAGCAGCTTATCGACTACACCGA
ATCGACTTTCAAGGAGGAGAAGATCTCTATCCGCGCAAAGACTATGGTCA
AGAACGTCACCGACAAGTACATCGAGGCTATGGTTACCAACCCTGATGGA
TCCAAGTCCATCGAACGTATTCCCTACGGTCTGCTGGTCTGGGCTACCGG
TAACGCTGTTCGCCCCGTGGTTCGCGATCTGATGAACCAGCTCCCTGCCC
AGAAGGACTCGCGTCGTGGTCTTGCTGTGAACGAGTACCTCGTCGTGAAC
GGCGCTGAGAACGTCTGGGCTGTTGGTGATTGTGCTATCACCAACTACGC
CCCTACTGCTCAGGTTGCCAGTCAGGAGGGTGCTTTCCTTGCCCGTCTTT
TCAACACCATGGCCAAGACCGAGGCTATCGAGAAGGAGTTGAAGCAGCTG
TCTGAGGCCCAGGCCCAGGCTAAGGGTGAGGAGCGTGACCAGGTCTTTGA
CGCAATCCGCGAACGCCAGAAGCAGCTGCGGAGAACCAAGCAGATTGGTC
CCTTCCAGTACTCCCACCAGGGTAGCATGGCCTACATCGGAAAGGAGCGC
GCTGTTGCGGACATCAGCTGGCTGAGCGGCAACATCGCCAGTGGTGGTAC
CATGACCTACCTCTTCTGGCGCAGTGCTTACCTGAGCATGTGCTTCAGCA
CTCGCAACCGTGTCCTGGTCGCCGTTGACTGGATCAAGGCCAAGCTGTTT
GGCCGCGACGTCTCTCGGGAGTAAATGGTTGGAAGTACGCTGGCGATCCG
CTCCAAGATGGCCTCTCCCTCCGCCGCCATGCAGTTGTCGTCGCTGTCGC
GCAGGTCGCTTTCGACGCGACCCCAGCTCCTTCGCTCCGCACGTCCCTTG
AGACAGCAGCAATTCCAGCGCTCTACTCGTCGCTCCTACGCCGATGCTGC
GCCCGCTGCCCCGACCCCCAAGCCCAAGAAGCGCTTCAGGTTCTTGCGCT
GGACCTGGCGCCTGACCTGGCTCTCCACTATCGGTGCGGCTGGTGCTCTG
GCCTACAGTGTCTATGAATTGCGCCATCCCGTCGAGCAGATCAAGCCTGA
TCCGACGAAGAAGACCCTTGTTATCCTGGGTACCGGATGGGGTACTGTTT
CCCTGCTGAAGAAGCTCGACACTGAGAATTACAATGTTGTCGTCATCTCT
CCTCGCAACTACTTCCTTTTCACTCCCCTCCTCCCCTCCTGCACGACTGG
TTTGATCGAGCACCGCTCCATCATGGAGCCGATCCGTAACATCCTCCGTC
AGAAGACCGCCCACGTGAACTTCTACGAAGCCGAAGCCACCAAGATCGAC
TACGAAAAGCGTGTCGTGTACATCAGCGATGACTCTGAGATCAAGGGAGA
CATCTCCCACACCGAGGTGCCCTTCGACATGCTTGTCGTTGGTGTCGGTG
CTGAAAACGCAACCTTCGGTATCCCCGGTGTCCGGGAGAACTCCTGCTTC
CTGAAGGAGGTCGACGATGCTCAGAAGATCCGCAAGCGCATCATGGACTG
CATTGAGACTGCCATGTTCAAGGACCAGACTGAAGACGAAGTCAAGCGTC
TTCTCCACATGGTTGTTGTTGGCGGTGGCCCGACTGGTGTCGAGTTCGCC
GGTGAGCTGCAGGACTTCTTCGAGGACGACTTGAAGAAGTGGGTTCCTGA
GATCCAGGAGAACTTCAAGGTTACCCTCGTTGAAGCTCTTCCCAACGTCC
TTCCCATGTTCTCCAAGCAGCTTATCGACTACACCGAATCGACTTTCAAG
GAGGAGAAGATCTCTATCCGCGCAAAGACTATGGTCAAGAACGTCACCGA
CAAGTACATCGAGGCTATGGTTACCAACCCTGATGGATCCAAGTCCATCG
AACGTATTCCCTACGGTCTGCTGGTCTGGGCTACCGGTAACGCTGTTCGC
CCCGTGGTTCGCGATCTGATGAACCAGCTCCCTGCCCAGAAGGACTCGCG
TCGTGGTCTTGCTGTGAACGAGTACCTCGTCGTGAACGGCGCTGAGAACG
TCTGGGCTGTTGGTGATTGTGCTATCACCAACTACGCCCCTACTGCTCAG
GTTGCCAGTCAGGAGGGTGCTTTCCTTGCCCGTCTTTTCAACACCATGGC
CAAGACCGAGGCTATCGAGAAGGAGTTGAAGCAGCTGTCTGAGGCCCAGG
CCCAGGCTAAGGGTGAGGAGCGTGACCAGGTCTTTGACGCAATCCGCGAA
CGCCAGAAGCAGCTGCGGAGAACCAAGCAGATTGGTCCCTTCCAGTACTC
CCACCAGGGTAGCATGGCCTACATCGGAAAGGAGCGCGCTGTTGCGGACA
TCAGCTGGCTGAGCGGCAACATCGCCAGTGGTGGTACCATGACCTACCTC
TTCTGGCGCAGTGCTTACCTGAGCATGTGCTTCAGCACTCGCAACCGTGT
CCTGGTCGCCGTTGACTGGATCAAGGCCAAGCTGTTTGGCCGCGACGTCT
CTCGGGAGTAAATGGTTGGAAGTACGCTGGCGATCCGCTCCAAGATGGCC
TCTCCCTCCGCCGCCATGCAGTTGTCGTCGCTGTCGCGCAGGTCGCTTTC
GACGCGACCCCAGCTCCTTCGCTCCGCACGTCCCTTGAGACAGCAGCAAT
TCCAGCGCTCTACTCGTCGCTCCTACGCCGATGCTGCGCCCGCTGCCCCG
ACCCCCAAGCCCAAGAAGCGCTTCAGGTTCTTGCGCTGGACCTGGCGCCT
GACCTGGCTCTCCACTATCGGTGCGGCTGGTGCTCTGGCCTACAGTGTCT
ATGAATTGCGCCATCCCGTCGAGCAGATCAAGCCTGATCCGACGAAGAAG
ACCCTTGTTATCCTGGGTACCGGATGGGGTACTGTTTCCCTGCTGAAGAA
GCTCGACACTGAGAATTACAATGTTGTCGTCATCTCTCCTCGCAACTACT
TCCTTTTCACTCCCCTCCTCCCCTCCTGCACGACTGGTTTGATCGAGCAC
CGCTCCATCATGGAGCCGATCCGTAACATCCTCCGTCAGAAGACCGCCCA
CGTGAACTTCTACGAAGCCGAAGCCACCAAGATCGACTACGAAAAGCGTG
TCGTGTACATCAGCGATGACTCTGAGATCAAGGGAGACATCTCCCACACC
GAGGTGCCCTTCGACATGCTTGTCGTTGGTGTCGGTGCTGAAAACGCAAC
CTTCGGTATCCCCGGTGTCCGGGAGAACTCCTGCTTCCTGAAGGAGGTCG
ACGATGCTCAGAAGATCCGCAAGCGCATCATGGACTGCATTGAGACTGCC
ATGTTCAAGGACCAGACTGAAGACGAAGTCAAGCGTCTTCTCCACATGGT
TGTTGTTGGCGGTGGCCCGACTGGTGTCGAGTTCGCCGGTGAGCTGCAGG
ACTTCTTCGAGGACGACTTGAAGAAGTGGGTTCCTGAGATCCAGGAGAAC
TTCAAGGTTACCCTCGTTGAAGCTCTTCCCAACGTCCTTCCCATGTTCTC
CAAGCAGCTTATCGACTACACCGAATCGACTTTCAAGGAGGAGAAGATCT
CTATCCGCGCAAAGACTATGGTCAAGAACGTCACCGACAAGTACATCGAG
GCTATGGTTACCAACCCTGATGGATCCAAGTCCATCGAACGTATTCCCTA
CGGTCTGCTGGTCTGGGCTACCGGTAACGCTGTTCGCCCCGTGGTTCGCG
ATCTGATGAACCAGCTCCCTGCCCAGAAGGACTCGCGTCGTGGTCTTGCT
GTGAACGAGTACCTCGTCGTGAACGGCGCTGAGAACGTCTGGGCTGTTGG
TGATTGTGCTATCACCAACTACGCCCCTACTGCTCAGGTTGCCAGTCAGG
AGGGTGCTTTCCTTGCCCGTCTTTTCAACACCATGGCCAAGACCGAGGCT
ATCGAGAAGGAGTTGAAGCAGCTGTCTGAGGCCCAGGCCCAGGCTAAGGG
TGAGGAGCGTGACCAGGTCTTTGACGCAATCCGCGAACGCCAGAAGCAGC
TGCGGAGAACCAAGCAGATTGGTCCCTTCCAGTACTCCCACCAGGGTAGC
ATGGCCTACATCGGAAAGGAGCGCGCTGTTGCGGACATCAGCTGGCTGAG
CGGCAACATCGCCAGTGGTGGTACCATGACCTACCTCTTCTGGCGCAGTG
CTTACCTGAGCATGTGCTTCAGCACTCGCAACCGTGTCCTGGTCGCCGTT
GACTGGATCAAGGCCAAGCTGTTTGGCCGCGACGTCTCTCGGGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012146-T1.utr5p1 | KJC3_012146-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012146-T1.utr3p1 | KJC3_012146-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR023753 |
| DBxref | PFAM:PF07992 |
| DBxref | PFAM:PF00070 |
| Product | External alternative NADH-ubiquinone oxidoreductase mitochondrial |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2709153..2712169 + |
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