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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2837005..2839496+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012191-T1 ID=KJC3_012191-T1|Name=KJC3_012191-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2492bp|location=Sequence derived from alignment at ch8:2837005..2839496+ (Aspergillus niger KJC3)
CTCCTATCCCATTATTCTCCCAATATGGCCCGAGGCGCTCGCTCAAGTCA
TGCTACAAGGGCCTCTAGGCCCTCGGCTGCTGCGTGCGAAGTATGCCGCC
ACCTAAAGATGCGTTGTATCCGGCCCGACCCATCGCAGCCATGCGACCGC
TGTCGACGCAACAATCGGCGCTGCGACATCCCCCCTCCCCGTCCTTTGGG
CCGCCGGCCCGGTGCTGTTGGTCGCTATAATGGATTCGAAAAGTCCTATA
GGAAAATGCAAGCACAGCTGAAGAAAGCACCGGTGTCGGCTGATGAGGTA
CAGCAGGTGCTGAATACCACGGGTCAGGAGGAATTGCTCCAATTCATTGT
GGCGAAGCTGCAGCATGGTAGTAACTGCGAGACGCCAGTGCCATCCACAG
ACAGTACACTGAGAAGCAACCACGACGGCTTGCCAACCCCGAAGGAGCCA
GTTAGCAATCCGCTCGCACTGCTGGCGGAAGCATCTAGCGTAGCAGAGCC
ATTGACTCCCTCACTAAATCGACCATCCACTACAAGTGGAGGTCAGGAGC
TGCTCCAGCGCTTAGGCTGTGTGTCATTGGGACTACAGCTAAGTCGAGAC
ACATTGGCACAAGGCCTCAATGCTCTTTATACCCCCTCTCCGCCAATTCA
CTGCCATTCAAGCTATTTCCGACCTCTTGATGCGGATCCACCTCGAGATG
TTGGCCCAGACCTGGATCCTATTGAGCTGGGGCTATTATCGCTAGAGGAT
GCGCATACTTTGTTTTCAATGTATGTGCAATACGCCCTGGGAATTCTCTT
ACTAACGGAGTACTAGCTATTTCGTCCGTTTACACCCTATCAACGGCATT
CTAGACCCAATTCTCCACACCGTCGCCTATGTGCGCTCCCGCTCCGCTCT
CCTTTTCACATGGATCCTGGCCATTACAGCTCAATTCGATCACCAGTCTG
CATCATGCGCCAAACGCCTGCGCCCCCACGGCGATATGCTCTCGCGCCAT
GTCCACACATCTGGGTACAAGTCCGTTGAAATTGTCCAAGGATACTACAT
ATCTCTTCTTTCCGCTACCCCTGCCTCAGCCTTGTCCGAGGAACGCTCAT
GGCTCTACACTTCCTACGCTGTCGCCGTCGCCACTGAACTCGGCTTAGAC
CAGGTTAATCCTTCTAATGTTCTCCCCTCCGAGTCGACAATGTCCCATCG
ACAGGCTCGCAATAGCGAACGAACCTGGCTGCGAATCCTGCTGTGGGAAC
GCGCTACCAGCGCCGCCTATGGGCGCGCAACTGCCTTTCCCGAGTCGCTA
TTGACCCGGAATATTGACAAATGGTGGCATCATCCTCTCGCCGATTCGAC
GGACAAGGACACATGTGCCTTCATTCTCCTCCGTCGCTATCTGGCAGGCC
TTCATCGCACCTTGCACCACCAAGCCTCTTTGTCTCACGATAACCCCCAC
TGGGTTCGCGATCTTGTCGACTCCACCCTCGATCCCTGGCGAATTACCTG
GCTTCCTGGCTGCACGACTAGAGCCATTACCCCCTCCCCCAACATATCCA
CGGCCTTTCTGACCTACGTTTATCTCCATAACCGTCTCTGGACGCTCTCT
TTCGCCCTACATACCCAGACCATTCATTCCCACGCCCTTCAGGAAGACTG
CTTCATGGCCGCCGTGCAATGCTGTACCCTCGCCGTGCACGATCTCCAAT
CAATTGGTGAACCTCTGTATTGTCTACTCTCCCCAACCTGGGCTATGATA
GCCTACGCCGCCACTCTGGCCCTCAGACTGTTCCCCGCTCTGTGTGGAAC
CCATCCCGGTGACGAGACCGAGTTGCTGGCACTACTAGGACAAGTAGCCC
TGCAGCTGGAGAAGGCAGGGAGCACACCGCCTCATAGAACTGGGATTGCA
GCCGTGCTGGGGAGGCATTTGCTTAGTATCCTGCGGGCGAAAGTTGGGAC
GGGGATTGGACCTAGGGTTGTTGCGGATAGCGGGCTGCCCTGTTCACCTG
AATCGGGGCTGGTGGGGAGTAGCTGCGATCCGGTCCTGGGGTCTGTTGCG
ATGGGTCTGGATGAAGGGTTTGCGGATGTGTTCCGGGAGGTGTTCGGGCC
GGGGTGGGGGTTGGGCATGGAATGAGATTGGAATGTTGGACGATAGTACT
TTCAGGAGTGTGGCAGAAGCAATGACGACGGATCAAGAGCGACGGGACAG
CGCAGATTGCGTCCTTTTAATTGAACCGTGCAGTGGCTCTATGAACACGA
AATTTACGCCTGGGTCGAGCACATTTGTATAGACTTGTATGTGCGCTGGT
CGTCATCTGCAGTGATGCTAGCTTACCTATGATTTAGTTAGTCTTGACTG
TCACCGTTTTATTGTGAAATTACTTCGTTCTGATTTCATTTTATTTGTCT
CATTATTCTTCATTTCTTTTCCTTCCCAGGGGATGGGGGAAAGGGGGACC
TATTCAAACTCCGAACACTGACAATTTCCCCCCCTTTTCTCC back to topCoding sequence (CDS) from alignment at ch8:2837005..2839496+ >KJC3_012191-T1 ID=KJC3_012191-T1|Name=KJC3_012191-T1|organism=Aspergillus niger KJC3|type=CDS|length=5967bp|location=Sequence derived from alignment at ch8:2837005..2839496+ (Aspergillus niger KJC3)
ATGGCCCGAGGCGCTCGCTCAAGTCATGCTACAAGGGCCTCTAGGCCCTC
GGCTGCTGCGTGCGAAGTATGCCGCCACCTAAAGATGCGTTGTATCCGGC
CCGACCCATCGCAGCCATGCGACCGCTGTCGACGCAACAATCGGCGCTGC
GACATCCCCCCTCCCCGTCCTTTGGGCCGCCGGCCCGGTGCTGTTGGTCG
CTATAATGGATTCGAAAAGTCCTATAGGAAAATGCAAGCACAGCTGAAGA
AAGCACCGGTGTCGGCTGATGAGGTACAGCAGGTGCTGAATACCACGGTG
CCATCCACAGACAGTACACTGAGAAGCAACCACGACGGCTTGCCAACCCC
GAAGGAGCCAGTTAGCAATCCGCTCGCACTGCTGGCGGAAGCATCTAGCG
TAGCAGAGCCATTGACTCCCTCACTAAATCGACCATCCACTACAAGTGGA
GGTCAGGAGCTGCTCCAGCGCTTAGGCTGTGTGTCATTGGGACTACAGCT
AAGTCGAGACACATTGGCACAAGGCCTCAATGCTCTTTATACCCCCTCTC
CGCCAATTCACTGCCATTCAAGCTATTTCCGACCTCTTGATGCGGATCCA
CCTCGAGATGTTGGCCCAGACCTGGATCCTATTGAGCTGGGGCTATTATC
GCTAGAGGATGCGCATACTTTGTTTTCAATCTATTTCGTCCGTTTACACC
CTATCAACGGCATTCTAGACCCAATTCTCCACACCGTCGCCTATGTGCGC
TCCCGCTCCGCTCTCCTTTTCACATGGATCCTGGCCATTACAGCTCAATT
CGATCACCAGTCTGCATCATGCGCCAAACGCCTGCGCCCCCACGGCGATA
TGCTCTCGCGCCATGTCCACACATCTGGGTACAAGTCCGTTGAAATTGTC
CAAGGATACTACATATCTCTTCTTTCCGCTACCCCTGCCTCAGCCTTGTC
CGAGGAACGCTCATGGCTCTACACTTCCTACGCTGTCGCCGTCGCCACTG
AACTCGGCTTAGACCAGGTTAATCCTTCTAATGTTCTCCCCTCCGAGTCG
ACAATGTCCCATCGACAGGCTCGCAATAGCGAACGAACCTGGCTGCGAAT
CCTGCTGTGGGAACGCGCTACCAGCGCCGCCTATGGGCGCGCAACTGCCT
TTCCCGAGTCGCTATTGACCCGGAATATTGACAAATGGTGGCATCATCCT
CTCGCCGATTCGACGGACAAGGACACATGTGCCTTCATTCTCCTCCGTCG
CTATCTGGCAGGCCTTCATCGCACCTTGCACCACCAAGCCTCTTTGTCTC
ACGATAACCCCCACTGGGTTCGCGATCTTGTCGACTCCACCCTCGATCCC
TGGCGAATTACCTGGCTTCCTGGCTGCACGACTAGAGCCATTACCCCCTC
CCCCAACATATCCACGGCCTTTCTGACCTACGTTTATCTCCATAACCGTC
TCTGGACGCTCTCTTTCGCCCTACATACCCAGACCATTCATTCCCACGCC
CTTCAGGAAGACTGCTTCATGGCCGCCGTGCAATGCTGTACCCTCGCCGT
GCACGATCTCCAATCAATTGGTGAACCTCTGTATTGTCTACTCTCCCCAA
CCTGGGCTATGATAGCCTACGCCGCCACTCTGGCCCTCAGACTGTTCCCC
GCTCTGTGTGGAACCCATCCCGGTGACGAGACCGAGTTGCTGGCACTACT
AGGACAAGTAGCCCTGCAGCTGGAGAAGGCAGGGAGCACACCGCCTCATA
GAACTGGGATTGCAGCCGTGCTGGGGAGGCATTTGCTTAGTATCCTGCGG
GCGAAAGTTGGGACGGGGATTGGACCTAGGGTTGTTGCGGATAGCGGGCT
GCCCTGTTCACCTGAATCGGGGCTGGTGGGGAGTAGCTGCGATCCGGTCC
TGGGGTCTGTTGCGATGGGTCTGGATGAAGGGTTTGCGGATGTGTTCCGG
GAGGTGTTCGGGCCGGGGTGGGGGTTGGGCATGGAATGAATGGCCCGAGG
CGCTCGCTCAAGTCATGCTACAAGGGCCTCTAGGCCCTCGGCTGCTGCGT
GCGAAGTATGCCGCCACCTAAAGATGCGTTGTATCCGGCCCGACCCATCG
CAGCCATGCGACCGCTGTCGACGCAACAATCGGCGCTGCGACATCCCCCC
TCCCCGTCCTTTGGGCCGCCGGCCCGGTGCTGTTGGTCGCTATAATGGAT
TCGAAAAGTCCTATAGGAAAATGCAAGCACAGCTGAAGAAAGCACCGGTG
TCGGCTGATGAGGTACAGCAGGTGCTGAATACCACGGTGCCATCCACAGA
CAGTACACTGAGAAGCAACCACGACGGCTTGCCAACCCCGAAGGAGCCAG
TTAGCAATCCGCTCGCACTGCTGGCGGAAGCATCTAGCGTAGCAGAGCCA
TTGACTCCCTCACTAAATCGACCATCCACTACAAGTGGAGGTCAGGAGCT
GCTCCAGCGCTTAGGCTGTGTGTCATTGGGACTACAGCTAAGTCGAGACA
CATTGGCACAAGGCCTCAATGCTCTTTATACCCCCTCTCCGCCAATTCAC
TGCCATTCAAGCTATTTCCGACCTCTTGATGCGGATCCACCTCGAGATGT
TGGCCCAGACCTGGATCCTATTGAGCTGGGGCTATTATCGCTAGAGGATG
CGCATACTTTGTTTTCAATCTATTTCGTCCGTTTACACCCTATCAACGGC
ATTCTAGACCCAATTCTCCACACCGTCGCCTATGTGCGCTCCCGCTCCGC
TCTCCTTTTCACATGGATCCTGGCCATTACAGCTCAATTCGATCACCAGT
CTGCATCATGCGCCAAACGCCTGCGCCCCCACGGCGATATGCTCTCGCGC
CATGTCCACACATCTGGGTACAAGTCCGTTGAAATTGTCCAAGGATACTA
CATATCTCTTCTTTCCGCTACCCCTGCCTCAGCCTTGTCCGAGGAACGCT
CATGGCTCTACACTTCCTACGCTGTCGCCGTCGCCACTGAACTCGGCTTA
GACCAGGTTAATCCTTCTAATGTTCTCCCCTCCGAGTCGACAATGTCCCA
TCGACAGGCTCGCAATAGCGAACGAACCTGGCTGCGAATCCTGCTGTGGG
AACGCGCTACCAGCGCCGCCTATGGGCGCGCAACTGCCTTTCCCGAGTCG
CTATTGACCCGGAATATTGACAAATGGTGGCATCATCCTCTCGCCGATTC
GACGGACAAGGACACATGTGCCTTCATTCTCCTCCGTCGCTATCTGGCAG
GCCTTCATCGCACCTTGCACCACCAAGCCTCTTTGTCTCACGATAACCCC
CACTGGGTTCGCGATCTTGTCGACTCCACCCTCGATCCCTGGCGAATTAC
CTGGCTTCCTGGCTGCACGACTAGAGCCATTACCCCCTCCCCCAACATAT
CCACGGCCTTTCTGACCTACGTTTATCTCCATAACCGTCTCTGGACGCTC
TCTTTCGCCCTACATACCCAGACCATTCATTCCCACGCCCTTCAGGAAGA
CTGCTTCATGGCCGCCGTGCAATGCTGTACCCTCGCCGTGCACGATCTCC
AATCAATTGGTGAACCTCTGTATTGTCTACTCTCCCCAACCTGGGCTATG
ATAGCCTACGCCGCCACTCTGGCCCTCAGACTGTTCCCCGCTCTGTGTGG
AACCCATCCCGGTGACGAGACCGAGTTGCTGGCACTACTAGGACAAGTAG
CCCTGCAGCTGGAGAAGGCAGGGAGCACACCGCCTCATAGAACTGGGATT
GCAGCCGTGCTGGGGAGGCATTTGCTTAGTATCCTGCGGGCGAAAGTTGG
GACGGGGATTGGACCTAGGGTTGTTGCGGATAGCGGGCTGCCCTGTTCAC
CTGAATCGGGGCTGGTGGGGAGTAGCTGCGATCCGGTCCTGGGGTCTGTT
GCGATGGGTCTGGATGAAGGGTTTGCGGATGTGTTCCGGGAGGTGTTCGG
GCCGGGGTGGGGGTTGGGCATGGAATGAATGGCCCGAGGCGCTCGCTCAA
GTCATGCTACAAGGGCCTCTAGGCCCTCGGCTGCTGCGTGCGAAGTATGC
CGCCACCTAAAGATGCGTTGTATCCGGCCCGACCCATCGCAGCCATGCGA
CCGCTGTCGACGCAACAATCGGCGCTGCGACATCCCCCCTCCCCGTCCTT
TGGGCCGCCGGCCCGGTGCTGTTGGTCGCTATAATGGATTCGAAAAGTCC
TATAGGAAAATGCAAGCACAGCTGAAGAAAGCACCGGTGTCGGCTGATGA
GGTACAGCAGGTGCTGAATACCACGGTGCCATCCACAGACAGTACACTGA
GAAGCAACCACGACGGCTTGCCAACCCCGAAGGAGCCAGTTAGCAATCCG
CTCGCACTGCTGGCGGAAGCATCTAGCGTAGCAGAGCCATTGACTCCCTC
ACTAAATCGACCATCCACTACAAGTGGAGGTCAGGAGCTGCTCCAGCGCT
TAGGCTGTGTGTCATTGGGACTACAGCTAAGTCGAGACACATTGGCACAA
GGCCTCAATGCTCTTTATACCCCCTCTCCGCCAATTCACTGCCATTCAAG
CTATTTCCGACCTCTTGATGCGGATCCACCTCGAGATGTTGGCCCAGACC
TGGATCCTATTGAGCTGGGGCTATTATCGCTAGAGGATGCGCATACTTTG
TTTTCAATCTATTTCGTCCGTTTACACCCTATCAACGGCATTCTAGACCC
AATTCTCCACACCGTCGCCTATGTGCGCTCCCGCTCCGCTCTCCTTTTCA
CATGGATCCTGGCCATTACAGCTCAATTCGATCACCAGTCTGCATCATGC
GCCAAACGCCTGCGCCCCCACGGCGATATGCTCTCGCGCCATGTCCACAC
ATCTGGGTACAAGTCCGTTGAAATTGTCCAAGGATACTACATATCTCTTC
TTTCCGCTACCCCTGCCTCAGCCTTGTCCGAGGAACGCTCATGGCTCTAC
ACTTCCTACGCTGTCGCCGTCGCCACTGAACTCGGCTTAGACCAGGTTAA
TCCTTCTAATGTTCTCCCCTCCGAGTCGACAATGTCCCATCGACAGGCTC
GCAATAGCGAACGAACCTGGCTGCGAATCCTGCTGTGGGAACGCGCTACC
AGCGCCGCCTATGGGCGCGCAACTGCCTTTCCCGAGTCGCTATTGACCCG
GAATATTGACAAATGGTGGCATCATCCTCTCGCCGATTCGACGGACAAGG
ACACATGTGCCTTCATTCTCCTCCGTCGCTATCTGGCAGGCCTTCATCGC
ACCTTGCACCACCAAGCCTCTTTGTCTCACGATAACCCCCACTGGGTTCG
CGATCTTGTCGACTCCACCCTCGATCCCTGGCGAATTACCTGGCTTCCTG
GCTGCACGACTAGAGCCATTACCCCCTCCCCCAACATATCCACGGCCTTT
CTGACCTACGTTTATCTCCATAACCGTCTCTGGACGCTCTCTTTCGCCCT
ACATACCCAGACCATTCATTCCCACGCCCTTCAGGAAGACTGCTTCATGG
CCGCCGTGCAATGCTGTACCCTCGCCGTGCACGATCTCCAATCAATTGGT
GAACCTCTGTATTGTCTACTCTCCCCAACCTGGGCTATGATAGCCTACGC
CGCCACTCTGGCCCTCAGACTGTTCCCCGCTCTGTGTGGAACCCATCCCG
GTGACGAGACCGAGTTGCTGGCACTACTAGGACAAGTAGCCCTGCAGCTG
GAGAAGGCAGGGAGCACACCGCCTCATAGAACTGGGATTGCAGCCGTGCT
GGGGAGGCATTTGCTTAGTATCCTGCGGGCGAAAGTTGGGACGGGGATTG
GACCTAGGGTTGTTGCGGATAGCGGGCTGCCCTGTTCACCTGAATCGGGG
CTGGTGGGGAGTAGCTGCGATCCGGTCCTGGGGTCTGTTGCGATGGGTCT
GGATGAAGGGTTTGCGGATGTGTTCCGGGAGGTGTTCGGGCCGGGGTGGG
GGTTGGGCATGGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012191-T1.utr5p1 | KJC3_012191-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012191-T1.utr3p1 | KJC3_012191-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.6 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR036864 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2837005..2839496 + |
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