|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2848353..2849909- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012196-T1 ID=KJC3_012196-T1|Name=KJC3_012196-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1557bp|location=Sequence derived from alignment at ch8:2848353..2849909- (Aspergillus niger KJC3)
CTAGGGCCTACAATTTACGAGCTTTTGGCCCCCAAATCAGCTTCGCGTTC
CCCGCGCATGTTCCAAATATAATGGAACAGATGCCACACATTTATCATCA
AAGCTTTCAAACCCACATGAACCACTGACCATGGCCAATTTAGGCAGTTG
GCAGCACTATAACCGAGATGCCTCAATTTCAATTACATTGTTGGGTGTCT
TCTTCGTGGGACTGCGCTTTCTCTCGAGGCATCTAGGAAAAGTGCCCCTG
GGCCTGGAGGATGGGCTGATTGTGGCCGCGGTGGTATGGCATCTTTCACC
ATACGCAGGGTTCAATTTGACGAAAAACGTAGTTGAACTTATTCGTCATT
TTCGCACTCGATATAGAGAGTAAGTCACCTCTAAATACTCTCTAACTTTC
TGCTTTATCTTGAAGATATTCTAAAATCTAACAGTGGTAAAATACGGCCT
TGGCCTGCACCAATCCACCATATCCATGGATAGCCTAATAACCATCAACA
AAGTAAGCCCTATCTCTCCGTACTCTCTTCTGACAAGCAAGCCATTCTAA
TACCATAGCAGCTCCTTCTCCCCGCCGAAATATTCTACTGCACCTCAATA
ATCCTCACCAAAACCTCCATCCTAGCAATGTACCACCGGATCTTCCACAT
CCATAGGCCCACCCGCATAGCCGTGTACATCCTGGGAGTGATAACGATCA
TCAGAGCCATATCCCTCATTTTTGCCTCCATCTTCCAGTGTACTCCTGTC
GCTAGGGCGTGGGACAAATTCCAATACCCCGGTCGATGCATTAACCTCAA
GGATACGTTTATTGCGAATGATGTTGTGAATGCTATCACTGATGTAGTCA
TTCTGGGGCTCCTGATCGGGAGAGTGTGGAAAGTGCAGGCAGGGTGGGGG
GTAAGGATGGGCGCCGTGGGGATGGTCTCTTTGGGGGGTTTGTGAGTATT
TTCTTTCTATTTCTCAATTGCTTATTCGTCTTGTTCTTCTTGCTTTCGTA
GAATGATTAAAAGATATGCTGACAGTAACATGTGATGTGGATAGTGTGGT
TTTCACGAGCATATATCGCATCATCACGCTTGTTGACGTTGATTTTGATG
ACTTGACATGTGCATTCACCCGTTTCTCCCCCTGCAAGTGGTGAGTAATA
TACTGATCAGTCGCAGATACACTAGGCCGATCGAACGCATGGTGTGTAAT
AGAAGTCTCTTCGGGGATTATCTCTGCGTGTCTCCCTACTCTACGTCCAC
TGGCAAGAGCTCTGTTTCCGCGAGTGTTCAGCAGAAAGCAGTCCTCTCGG
GGACAGGGGAGTTCAAGCTATCCTAAACCAGGCCTTCGTGGGCTATCAGG
CGAATCTAGTAAGGACATATTGTCTAAGAGACCAGATGTGGGTGTGGAGT
CAGATGGGGATGAGTACCCGTTGACTGTGGTTAAGATCAAAGGGGAGAGC
TGTAGGAGAAATTGAATTCCAATAGCGACTGGTTCCGTTCATATTCGGGT
ACTGGTTCATCTTGAAACACCGTTGGTTCATTGAATTGCTAGAAATCCTA
ATTCGGC back to topCoding sequence (CDS) from alignment at ch8:2848353..2849909- >KJC3_012196-T1 ID=KJC3_012196-T1|Name=KJC3_012196-T1|organism=Aspergillus niger KJC3|type=CDS|length=6012bp|location=Sequence derived from alignment at ch8:2848353..2849909- (Aspergillus niger KJC3)
ATACACTAGGCCGATCGAACGCATGGTGTGTAATAGAAGTCTCTTCGGGG
ATTATCTCTGCGTGTCTCCCTACTCTACGTCCACTGGCAAGAGCTCTGTT
TCCGCGAGTGTTCAGCAGAAAGCAGTCCTCTCGGGGACAGGGGAGTTCAA
GCTATCCTAAACCAGGCCTTCGTGGGCTATCAGGCGAATCTAGTAAGGAC
ATATTGTCTAAGAGACCAGATGTGGGTGTGGAGTCAGATGGGGATGAGTA
CCCGTTGACTGTGGTTAAGATCAAAGGGGAGAGCTGTAGGAGAAATTGAT
GTGGTTTTCACGAGCATATATCGCATCATCACGCTTGTTGACGTTGATTT
TGATGACTTGACATCTCCTTCTCCCCGCCGAAATATTCTACTGCACCTCA
ATAATCCTCACCAAAACCTCCATCCTAGCAATGTACCACCGGATCTTCCA
CATCCATAGGCCCACCCGCATAGCCGTGTACATCCTGGGAGTGATAACGA
TCATCAGAGCCATATCCCTCATTTTTGCCTCCATCTTCCAGTGTACTCCT
GTCGCTAGGGCGTGGGACAAATTCCAATACCCCGGTCGATGCATTAACCT
CAAGGATACGTTTATTGCGAATGATGTTGTGAATGCTATCACTGATGTAG
TCATTCTGGGGCTCCTGATCGGGAGAGTGTGGAAAGTGCAGGCAGGGTGG
GGGGTAAGGATGGGCGCCGTGGGGATGGTCTCTTTGGGGGGTTTTGGTAA
AATACGGCCTTGGCCTGCACCAATCCACCATATCCATGGATAGCCTAATA
ACCATCAACAAATTGAACTTATTCGTCATTTTCGCACTCGATATAGAGAA
TGGCCAATTTAGGCAGTTGGCAGCACTATAACCGAGATGCCTCAATTTCA
ATTACATTGTTGGGTGTCTTCTTCGTGGGACTGCGCTTTCTCTCGAGGCA
TCTAGGAAAAGTGCCCCTGGGCCTGGAGGATGGGCTGATTGTGGCCGCGG
TGATACACTAGGCCGATCGAACGCATGGTGTGTAATAGAAGTCTCTTCGG
GGATTATCTCTGCGTGTCTCCCTACTCTACGTCCACTGGCAAGAGCTCTG
TTTCCGCGAGTGTTCAGCAGAAAGCAGTCCTCTCGGGGACAGGGGAGTTC
AAGCTATCCTAAACCAGGCCTTCGTGGGCTATCAGGCGAATCTAGTAAGG
ACATATTGTCTAAGAGACCAGATGTGGGTGTGGAGTCAGATGGGGATGAG
TACCCGTTGACTGTGGTTAAGATCAAAGGGGAGAGCTGTAGGAGAAATTG
ATGTGGTTTTCACGAGCATATATCGCATCATCACGCTTGTTGACGTTGAT
TTTGATGACTTGACATCTCCTTCTCCCCGCCGAAATATTCTACTGCACCT
CAATAATCCTCACCAAAACCTCCATCCTAGCAATGTACCACCGGATCTTC
CACATCCATAGGCCCACCCGCATAGCCGTGTACATCCTGGGAGTGATAAC
GATCATCAGAGCCATATCCCTCATTTTTGCCTCCATCTTCCAGTGTACTC
CTGTCGCTAGGGCGTGGGACAAATTCCAATACCCCGGTCGATGCATTAAC
CTCAAGGATACGTTTATTGCGAATGATGTTGTGAATGCTATCACTGATGT
AGTCATTCTGGGGCTCCTGATCGGGAGAGTGTGGAAAGTGCAGGCAGGGT
GGGGGGTAAGGATGGGCGCCGTGGGGATGGTCTCTTTGGGGGGTTTTGGT
AAAATACGGCCTTGGCCTGCACCAATCCACCATATCCATGGATAGCCTAA
TAACCATCAACAAATTGAACTTATTCGTCATTTTCGCACTCGATATAGAG
AATGGCCAATTTAGGCAGTTGGCAGCACTATAACCGAGATGCCTCAATTT
CAATTACATTGTTGGGTGTCTTCTTCGTGGGACTGCGCTTTCTCTCGAGG
CATCTAGGAAAAGTGCCCCTGGGCCTGGAGGATGGGCTGATTGTGGCCGC
GGTGATACACTAGGCCGATCGAACGCATGGTGTGTAATAGAAGTCTCTTC
GGGGATTATCTCTGCGTGTCTCCCTACTCTACGTCCACTGGCAAGAGCTC
TGTTTCCGCGAGTGTTCAGCAGAAAGCAGTCCTCTCGGGGACAGGGGAGT
TCAAGCTATCCTAAACCAGGCCTTCGTGGGCTATCAGGCGAATCTAGTAA
GGACATATTGTCTAAGAGACCAGATGTGGGTGTGGAGTCAGATGGGGATG
AGTACCCGTTGACTGTGGTTAAGATCAAAGGGGAGAGCTGTAGGAGAAAT
TGATGTGGTTTTCACGAGCATATATCGCATCATCACGCTTGTTGACGTTG
ATTTTGATGACTTGACATCTCCTTCTCCCCGCCGAAATATTCTACTGCAC
CTCAATAATCCTCACCAAAACCTCCATCCTAGCAATGTACCACCGGATCT
TCCACATCCATAGGCCCACCCGCATAGCCGTGTACATCCTGGGAGTGATA
ACGATCATCAGAGCCATATCCCTCATTTTTGCCTCCATCTTCCAGTGTAC
TCCTGTCGCTAGGGCGTGGGACAAATTCCAATACCCCGGTCGATGCATTA
ACCTCAAGGATACGTTTATTGCGAATGATGTTGTGAATGCTATCACTGAT
GTAGTCATTCTGGGGCTCCTGATCGGGAGAGTGTGGAAAGTGCAGGCAGG
GTGGGGGGTAAGGATGGGCGCCGTGGGGATGGTCTCTTTGGGGGGTTTTG
GTAAAATACGGCCTTGGCCTGCACCAATCCACCATATCCATGGATAGCCT
AATAACCATCAACAAATTGAACTTATTCGTCATTTTCGCACTCGATATAG
AGAATGGCCAATTTAGGCAGTTGGCAGCACTATAACCGAGATGCCTCAAT
TTCAATTACATTGTTGGGTGTCTTCTTCGTGGGACTGCGCTTTCTCTCGA
GGCATCTAGGAAAAGTGCCCCTGGGCCTGGAGGATGGGCTGATTGTGGCC
GCGGTGATACACTAGGCCGATCGAACGCATGGTGTGTAATAGAAGTCTCT
TCGGGGATTATCTCTGCGTGTCTCCCTACTCTACGTCCACTGGCAAGAGC
TCTGTTTCCGCGAGTGTTCAGCAGAAAGCAGTCCTCTCGGGGACAGGGGA
GTTCAAGCTATCCTAAACCAGGCCTTCGTGGGCTATCAGGCGAATCTAGT
AAGGACATATTGTCTAAGAGACCAGATGTGGGTGTGGAGTCAGATGGGGA
TGAGTACCCGTTGACTGTGGTTAAGATCAAAGGGGAGAGCTGTAGGAGAA
ATTGATGTGGTTTTCACGAGCATATATCGCATCATCACGCTTGTTGACGT
TGATTTTGATGACTTGACATCTCCTTCTCCCCGCCGAAATATTCTACTGC
ACCTCAATAATCCTCACCAAAACCTCCATCCTAGCAATGTACCACCGGAT
CTTCCACATCCATAGGCCCACCCGCATAGCCGTGTACATCCTGGGAGTGA
TAACGATCATCAGAGCCATATCCCTCATTTTTGCCTCCATCTTCCAGTGT
ACTCCTGTCGCTAGGGCGTGGGACAAATTCCAATACCCCGGTCGATGCAT
TAACCTCAAGGATACGTTTATTGCGAATGATGTTGTGAATGCTATCACTG
ATGTAGTCATTCTGGGGCTCCTGATCGGGAGAGTGTGGAAAGTGCAGGCA
GGGTGGGGGGTAAGGATGGGCGCCGTGGGGATGGTCTCTTTGGGGGGTTT
TGGTAAAATACGGCCTTGGCCTGCACCAATCCACCATATCCATGGATAGC
CTAATAACCATCAACAAATTGAACTTATTCGTCATTTTCGCACTCGATAT
AGAGAATGGCCAATTTAGGCAGTTGGCAGCACTATAACCGAGATGCCTCA
ATTTCAATTACATTGTTGGGTGTCTTCTTCGTGGGACTGCGCTTTCTCTC
GAGGCATCTAGGAAAAGTGCCCCTGGGCCTGGAGGATGGGCTGATTGTGG
CCGCGGTGATACACTAGGCCGATCGAACGCATGGTGTGTAATAGAAGTCT
CTTCGGGGATTATCTCTGCGTGTCTCCCTACTCTACGTCCACTGGCAAGA
GCTCTGTTTCCGCGAGTGTTCAGCAGAAAGCAGTCCTCTCGGGGACAGGG
GAGTTCAAGCTATCCTAAACCAGGCCTTCGTGGGCTATCAGGCGAATCTA
GTAAGGACATATTGTCTAAGAGACCAGATGTGGGTGTGGAGTCAGATGGG
GATGAGTACCCGTTGACTGTGGTTAAGATCAAAGGGGAGAGCTGTAGGAG
AAATTGATGTGGTTTTCACGAGCATATATCGCATCATCACGCTTGTTGAC
GTTGATTTTGATGACTTGACATCTCCTTCTCCCCGCCGAAATATTCTACT
GCACCTCAATAATCCTCACCAAAACCTCCATCCTAGCAATGTACCACCGG
ATCTTCCACATCCATAGGCCCACCCGCATAGCCGTGTACATCCTGGGAGT
GATAACGATCATCAGAGCCATATCCCTCATTTTTGCCTCCATCTTCCAGT
GTACTCCTGTCGCTAGGGCGTGGGACAAATTCCAATACCCCGGTCGATGC
ATTAACCTCAAGGATACGTTTATTGCGAATGATGTTGTGAATGCTATCAC
TGATGTAGTCATTCTGGGGCTCCTGATCGGGAGAGTGTGGAAAGTGCAGG
CAGGGTGGGGGGTAAGGATGGGCGCCGTGGGGATGGTCTCTTTGGGGGGT
TTTGGTAAAATACGGCCTTGGCCTGCACCAATCCACCATATCCATGGATA
GCCTAATAACCATCAACAAATTGAACTTATTCGTCATTTTCGCACTCGAT
ATAGAGAATGGCCAATTTAGGCAGTTGGCAGCACTATAACCGAGATGCCT
CAATTTCAATTACATTGTTGGGTGTCTTCTTCGTGGGACTGCGCTTTCTC
TCGAGGCATCTAGGAAAAGTGCCCCTGGGCCTGGAGGATGGGCTGATTGT
GGCCGCGGTGATACACTAGGCCGATCGAACGCATGGTGTGTAATAGAAGT
CTCTTCGGGGATTATCTCTGCGTGTCTCCCTACTCTACGTCCACTGGCAA
GAGCTCTGTTTCCGCGAGTGTTCAGCAGAAAGCAGTCCTCTCGGGGACAG
GGGAGTTCAAGCTATCCTAAACCAGGCCTTCGTGGGCTATCAGGCGAATC
TAGTAAGGACATATTGTCTAAGAGACCAGATGTGGGTGTGGAGTCAGATG
GGGATGAGTACCCGTTGACTGTGGTTAAGATCAAAGGGGAGAGCTGTAGG
AGAAATTGATGTGGTTTTCACGAGCATATATCGCATCATCACGCTTGTTG
ACGTTGATTTTGATGACTTGACATCTCCTTCTCCCCGCCGAAATATTCTA
CTGCACCTCAATAATCCTCACCAAAACCTCCATCCTAGCAATGTACCACC
GGATCTTCCACATCCATAGGCCCACCCGCATAGCCGTGTACATCCTGGGA
GTGATAACGATCATCAGAGCCATATCCCTCATTTTTGCCTCCATCTTCCA
GTGTACTCCTGTCGCTAGGGCGTGGGACAAATTCCAATACCCCGGTCGAT
GCATTAACCTCAAGGATACGTTTATTGCGAATGATGTTGTGAATGCTATC
ACTGATGTAGTCATTCTGGGGCTCCTGATCGGGAGAGTGTGGAAAGTGCA
GGCAGGGTGGGGGGTAAGGATGGGCGCCGTGGGGATGGTCTCTTTGGGGG
GTTTTGGTAAAATACGGCCTTGGCCTGCACCAATCCACCATATCCATGGA
TAGCCTAATAACCATCAACAAATTGAACTTATTCGTCATTTTCGCACTCG
ATATAGAGAATGGCCAATTTAGGCAGTTGGCAGCACTATAACCGAGATGC
CTCAATTTCAATTACATTGTTGGGTGTCTTCTTCGTGGGACTGCGCTTTC
TCTCGAGGCATCTAGGAAAAGTGCCCCTGGGCCTGGAGGATGGGCTGATT
GTGGCCGCGGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012196-T1.utr3p1 | KJC3_012196-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012196-T1.utr5p1 | KJC3_012196-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.6 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2848353..2849909 - |
|
