|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2879143..2881376- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012210-T1 ID=KJC3_012210-T1|Name=KJC3_012210-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2234bp|location=Sequence derived from alignment at ch8:2879143..2881376- (Aspergillus niger KJC3)
AATCGCTCCAGCATCCATCAAGCAATCAAACACCACCACCACACCACCGA
TCTCTCAGCTCGCAGCCTCGCACTTCTTCACACCCAAACAATTCTCACGC
GACCAACCAGCTCTACACGGGTGTCGAAACCTACCATATCCAATTCCCAT
TATCTCTTCCCCCGTCCACCCTAAAATCAATTGCCACAAGTCCTGCGCGC
GCACTCTCTCTCCCTAGGCCGAAATCCGGGGAAGCTCCAACTCCAACACC
CTCTTCTCATTTGCTCGCACCGATAAACAATACAACACAACACAGCTACT
CTCCATCAATCTCCGAATATATACAGAGACAGCAAGACACTGATGCGGAC
CCATCATCGCGCGCACTTCCGTCCCCGTCTGCTCTCATGTTGCTGAACCC
GTCCGGCGCCTTGTTCCTCGCACCATGTCGGATTCAGTGGGTGCGTTTAC
CCCGGAAGGAATATACAATATGATGAAGAATGAGAGGAAGGAACAGAAGT
GTATTAGGGAGATCATGTGCTGATTGATATGGTTCAGATCGTGTCTTCGT
CCATGCCCTTAACACGGTGAAACGCATTCCCCGCACGGGGACCGCTAGGC
CGCCGGCGTCGGAGAGATTGAAGCTCTATGGCTTGTATAAGCAGAGCATG
GGTATTTCTCCCCTCCTTTCACTTTCTTTATTGGGGCATTGTCTGTGTTG
GACATTGGATGATAATGTAATGGTCATGCTGACGAGTACTTAATTGGAAC
TTGTAGAAGGCGATGTCGAAGGCGTCATGGATCGACCGGTCGGGAATACT
GCGGATGTGTTTATGGAGTGTGAGAAATGGTACATCTACCCTCCCGAGCT
TTCTCTTCTATATGCTATCAGTGTACTAATAATGTAGGGACGCATGGCAC
GCCCAACGAGGTCTCTCCCGCACAGAAGCCAAACGACGCTACATCTCCAC
CCTCATCGAAACCATGCATAACTACGCTTCCCAAACAGCCGAGGCAAGGG
AACTCGTCGCCGAATTGGAATTCGTTTGGGATCAGATTAAATCCAACCCG
TCTTCGTCGTCTATGTCCTCGTCCCAGGAACCGGGTAGTCCGGTGGCTTC
TGCAGCGGTGTCGATGCGTGATCACGCGAGGTTACAGCCGCAGTCTAGTA
ATAGATTGACTCGTCCGGAGTATGAGCAGCTACTTGCCAATACGGCTAGA
GGAAGAGGGAGTGAGAGACTACGGGTGTTAAGTCCGGTTAGTCAGGCGGA
GTCAGGGTTTCGGCGACAGATGGAGGAGGAGCCAGCAGAAGAGGAGGAAG
AAGAGGAAGAGGAGGAAGTGTACGCGGAAGCACAGGATAATCTATTCGAG
AATGAAGAAGGAGAAGATGATGACGAAGAAGGACACATGGAGGAAGAAGA
GTACAACAACAATCACGACCGTCACGAATCGCATGACTATCACCAACAAG
GATACAACTTCCCCTCCCACCAGGAAGAATACGATCACGATCACCACCAC
CATGATACCCTAAGTCGAAGACGACCACCCCCACCCCCCGACGACTCCAA
ACGCTGGCGTCGCACAGTCGAGCAGGCCTTGACGACCATGACCGCGGAAA
TCGCCGCCGTGCGAGAACAACTGGAAGCGCGAGCGTTAGCTCATCGTCGA
CGAACGGGCCTGTGGGCCTGGCTGAAGTGGTTAGTTTGGGTCGCTGCACG
GCAGATCATGGTTGATTTGGCGCTGCTGGGTATGCTTCTTATTTGGATGA
GACTGCGAGGAGATCGCAGGTTGGAGGAGAAGTTGAAGGTGGGTTGGGCG
GAGGTGAAGACGAGGTTGGTGTTGTTGATGGTGTTCAGGAGGGTTAGGAG
GGTGGTGTCTAAATCTTCTTCTTCTGCTGATAAGACCTCGTCGTGAGGTT
CTGATGCCCTTTTCCTTTTTACCGTCATTGGGTCCATGATTCCCTTTCTT
TTGTCTTTTCTTGGTACATATACATATATACCTTTCCTTTCTTTCTTTTT
TATTCTTACTTATTATACCTTCTCTTTCTTTTATTTTTTTTTTCATTTCT
TTTGTTGTGTCAGGTCCATTTTTAGAGGCTGTCCACTTCTTTGCGGAGCT
TGATATCTCATTGCAGTGGTTAGCTGTCTGCATATTTCTGCGGTGTTCTG
GTTGTATACTTTTGTATTCTAGGTAGTTTCATACTTCAGTCCATAGATCT
GGAGCCTGGATTATAGTGTATGCATCATCGTCAT back to topCoding sequence (CDS) from alignment at ch8:2879143..2881376- >KJC3_012210-T1 ID=KJC3_012210-T1|Name=KJC3_012210-T1|organism=Aspergillus niger KJC3|type=CDS|length=4848bp|location=Sequence derived from alignment at ch8:2879143..2881376- (Aspergillus niger KJC3)
GGACGCATGGCACGCCCAACGAGGTCTCTCCCGCACAGAAGCCAAACGAC
GCTACATCTCCACCCTCATCGAAACCATGCATAACTACGCTTCCCAAACA
GCCGAGGCAAGGGAACTCGTCGCCGAATTGGAATTCGTTTGGGATCAGAT
TAAATCCAACCCGTCTTCGTCGTCTATGTCCTCGTCCCAGGAACCGGGTA
GTCCGGTGGCTTCTGCAGCGGTGTCGATGCGTGATCACGCGAGGTTACAG
CCGCAGTCTAGTAATAGATTGACTCGTCCGGAGTATGAGCAGCTACTTGC
CAATACGGCTAGAGGAAGAGGGAGTGAGAGACTACGGGTGTTAAGTCCGG
TTAGTCAGGCGGAGTCAGGGTTTCGGCGACAGATGGAGGAGGAGCCAGCA
GAAGAGGAGGAAGAAGAGGAAGAGGAGGAAGTGTACGCGGAAGCACAGGA
TAATCTATTCGAGAATGAAGAAGGAGAAGATGATGACGAAGAAGGACACA
TGGAGGAAGAAGAGTACAACAACAATCACGACCGTCACGAATCGCATGAC
TATCACCAACAAGGATACAACTTCCCCTCCCACCAGGAAGAATACGATCA
CGATCACCACCACCATGATACCCTAAGTCGAAGACGACCACCCCCACCCC
CCGACGACTCCAAACGCTGGCGTCGCACAGTCGAGCAGGCCTTGACGACC
ATGACCGCGGAAATCGCCGCCGTGCGAGAACAACTGGAAGCGCGAGCGTT
AGCTCATCGTCGACGAACGGGCCTGTGGGCCTGGCTGAAGTGGTTAGTTT
GGGTCGCTGCACGGCAGATCATGGTTGATTTGGCGCTGCTGGGTATGCTT
CTTATTTGGATGAGACTGCGAGGAGATCGCAGGTTGGAGGAGAAGTTGAA
GGTGGGTTGGGCGGAGGTGAAGACGAGGTTGGTGTTGTTGATGGTGTTCA
GGAGGGTTAGGAGGGTGGTGTCTAAATCTTCTTCTTCTGCTGATAAGACC
TCGTCGTGAAAGGCGATGTCGAAGGCGTCATGGATCGACCGGTCGGGAAT
ACTGCGGATGTGTTTATGGAGTGTGAGAAATGATCGTGTCTTCGTCCATG
CCCTTAACACGGTGAAACGCATTCCCCGCACGGGGACCGCTAGGCCGCCG
GCGTCGGAGAGATTGAAGCTCTATGGCTTGTATAAGCAGAGCATGGATGT
CGGATTCAGTGGGGACGCATGGCACGCCCAACGAGGTCTCTCCCGCACAG
AAGCCAAACGACGCTACATCTCCACCCTCATCGAAACCATGCATAACTAC
GCTTCCCAAACAGCCGAGGCAAGGGAACTCGTCGCCGAATTGGAATTCGT
TTGGGATCAGATTAAATCCAACCCGTCTTCGTCGTCTATGTCCTCGTCCC
AGGAACCGGGTAGTCCGGTGGCTTCTGCAGCGGTGTCGATGCGTGATCAC
GCGAGGTTACAGCCGCAGTCTAGTAATAGATTGACTCGTCCGGAGTATGA
GCAGCTACTTGCCAATACGGCTAGAGGAAGAGGGAGTGAGAGACTACGGG
TGTTAAGTCCGGTTAGTCAGGCGGAGTCAGGGTTTCGGCGACAGATGGAG
GAGGAGCCAGCAGAAGAGGAGGAAGAAGAGGAAGAGGAGGAAGTGTACGC
GGAAGCACAGGATAATCTATTCGAGAATGAAGAAGGAGAAGATGATGACG
AAGAAGGACACATGGAGGAAGAAGAGTACAACAACAATCACGACCGTCAC
GAATCGCATGACTATCACCAACAAGGATACAACTTCCCCTCCCACCAGGA
AGAATACGATCACGATCACCACCACCATGATACCCTAAGTCGAAGACGAC
CACCCCCACCCCCCGACGACTCCAAACGCTGGCGTCGCACAGTCGAGCAG
GCCTTGACGACCATGACCGCGGAAATCGCCGCCGTGCGAGAACAACTGGA
AGCGCGAGCGTTAGCTCATCGTCGACGAACGGGCCTGTGGGCCTGGCTGA
AGTGGTTAGTTTGGGTCGCTGCACGGCAGATCATGGTTGATTTGGCGCTG
CTGGGTATGCTTCTTATTTGGATGAGACTGCGAGGAGATCGCAGGTTGGA
GGAGAAGTTGAAGGTGGGTTGGGCGGAGGTGAAGACGAGGTTGGTGTTGT
TGATGGTGTTCAGGAGGGTTAGGAGGGTGGTGTCTAAATCTTCTTCTTCT
GCTGATAAGACCTCGTCGTGAAAGGCGATGTCGAAGGCGTCATGGATCGA
CCGGTCGGGAATACTGCGGATGTGTTTATGGAGTGTGAGAAATGATCGTG
TCTTCGTCCATGCCCTTAACACGGTGAAACGCATTCCCCGCACGGGGACC
GCTAGGCCGCCGGCGTCGGAGAGATTGAAGCTCTATGGCTTGTATAAGCA
GAGCATGGATGTCGGATTCAGTGGGGACGCATGGCACGCCCAACGAGGTC
TCTCCCGCACAGAAGCCAAACGACGCTACATCTCCACCCTCATCGAAACC
ATGCATAACTACGCTTCCCAAACAGCCGAGGCAAGGGAACTCGTCGCCGA
ATTGGAATTCGTTTGGGATCAGATTAAATCCAACCCGTCTTCGTCGTCTA
TGTCCTCGTCCCAGGAACCGGGTAGTCCGGTGGCTTCTGCAGCGGTGTCG
ATGCGTGATCACGCGAGGTTACAGCCGCAGTCTAGTAATAGATTGACTCG
TCCGGAGTATGAGCAGCTACTTGCCAATACGGCTAGAGGAAGAGGGAGTG
AGAGACTACGGGTGTTAAGTCCGGTTAGTCAGGCGGAGTCAGGGTTTCGG
CGACAGATGGAGGAGGAGCCAGCAGAAGAGGAGGAAGAAGAGGAAGAGGA
GGAAGTGTACGCGGAAGCACAGGATAATCTATTCGAGAATGAAGAAGGAG
AAGATGATGACGAAGAAGGACACATGGAGGAAGAAGAGTACAACAACAAT
CACGACCGTCACGAATCGCATGACTATCACCAACAAGGATACAACTTCCC
CTCCCACCAGGAAGAATACGATCACGATCACCACCACCATGATACCCTAA
GTCGAAGACGACCACCCCCACCCCCCGACGACTCCAAACGCTGGCGTCGC
ACAGTCGAGCAGGCCTTGACGACCATGACCGCGGAAATCGCCGCCGTGCG
AGAACAACTGGAAGCGCGAGCGTTAGCTCATCGTCGACGAACGGGCCTGT
GGGCCTGGCTGAAGTGGTTAGTTTGGGTCGCTGCACGGCAGATCATGGTT
GATTTGGCGCTGCTGGGTATGCTTCTTATTTGGATGAGACTGCGAGGAGA
TCGCAGGTTGGAGGAGAAGTTGAAGGTGGGTTGGGCGGAGGTGAAGACGA
GGTTGGTGTTGTTGATGGTGTTCAGGAGGGTTAGGAGGGTGGTGTCTAAA
TCTTCTTCTTCTGCTGATAAGACCTCGTCGTGAAAGGCGATGTCGAAGGC
GTCATGGATCGACCGGTCGGGAATACTGCGGATGTGTTTATGGAGTGTGA
GAAATGATCGTGTCTTCGTCCATGCCCTTAACACGGTGAAACGCATTCCC
CGCACGGGGACCGCTAGGCCGCCGGCGTCGGAGAGATTGAAGCTCTATGG
CTTGTATAAGCAGAGCATGGATGTCGGATTCAGTGGGGACGCATGGCACG
CCCAACGAGGTCTCTCCCGCACAGAAGCCAAACGACGCTACATCTCCACC
CTCATCGAAACCATGCATAACTACGCTTCCCAAACAGCCGAGGCAAGGGA
ACTCGTCGCCGAATTGGAATTCGTTTGGGATCAGATTAAATCCAACCCGT
CTTCGTCGTCTATGTCCTCGTCCCAGGAACCGGGTAGTCCGGTGGCTTCT
GCAGCGGTGTCGATGCGTGATCACGCGAGGTTACAGCCGCAGTCTAGTAA
TAGATTGACTCGTCCGGAGTATGAGCAGCTACTTGCCAATACGGCTAGAG
GAAGAGGGAGTGAGAGACTACGGGTGTTAAGTCCGGTTAGTCAGGCGGAG
TCAGGGTTTCGGCGACAGATGGAGGAGGAGCCAGCAGAAGAGGAGGAAGA
AGAGGAAGAGGAGGAAGTGTACGCGGAAGCACAGGATAATCTATTCGAGA
ATGAAGAAGGAGAAGATGATGACGAAGAAGGACACATGGAGGAAGAAGAG
TACAACAACAATCACGACCGTCACGAATCGCATGACTATCACCAACAAGG
ATACAACTTCCCCTCCCACCAGGAAGAATACGATCACGATCACCACCACC
ATGATACCCTAAGTCGAAGACGACCACCCCCACCCCCCGACGACTCCAAA
CGCTGGCGTCGCACAGTCGAGCAGGCCTTGACGACCATGACCGCGGAAAT
CGCCGCCGTGCGAGAACAACTGGAAGCGCGAGCGTTAGCTCATCGTCGAC
GAACGGGCCTGTGGGCCTGGCTGAAGTGGTTAGTTTGGGTCGCTGCACGG
CAGATCATGGTTGATTTGGCGCTGCTGGGTATGCTTCTTATTTGGATGAG
ACTGCGAGGAGATCGCAGGTTGGAGGAGAAGTTGAAGGTGGGTTGGGCGG
AGGTGAAGACGAGGTTGGTGTTGTTGATGGTGTTCAGGAGGGTTAGGAGG
GTGGTGTCTAAATCTTCTTCTTCTGCTGATAAGACCTCGTCGTGAAAGGC
GATGTCGAAGGCGTCATGGATCGACCGGTCGGGAATACTGCGGATGTGTT
TATGGAGTGTGAGAAATGATCGTGTCTTCGTCCATGCCCTTAACACGGTG
AAACGCATTCCCCGCACGGGGACCGCTAGGCCGCCGGCGTCGGAGAGATT
GAAGCTCTATGGCTTGTATAAGCAGAGCATGGATGTCGGATTCAGTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000062 | fatty-acyl-CoA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012210-T1.utr3p1 | KJC3_012210-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012210-T1.utr5p1 | KJC3_012210-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035984 |
| DBxref | InterPro:IPR014352 |
| DBxref | InterPro:IPR000582 |
| DBxref | PFAM:PF00887 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2879143..2881376 - |
|
