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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2909032..2911904+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012218-T1 ID=KJC3_012218-T1|Name=KJC3_012218-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2873bp|location=Sequence derived from alignment at ch8:2909032..2911904+ (Aspergillus niger KJC3)
CGTTTTTAAACCTTTTCTCTCCCTCATCTTCCTTCTTCTCTCTTCCTCCC
ACTTCCTTTCCCTTCCCCCCCTCCTCCACCTCCCTGCCCATTGAACAGAA
TTTTCCCTCTCCTTCCCTCTCTCCCTCCCCTGTTTCTTTCTTTTCTATCT
TGCGCGTCAATCGCGCACACTCCCCTGTCAGCATGGATATGAACCATTTA
ATAGGGTCAGTGTTCTATGCCACTACTGGTCTGAACCAGGGTTTGTGCGG
CTAGGCGGGAGTTAACACCTGGCAGTCAGCGTTTCAACCTGATCTCCAAG
AGTGACATTCGGTATGTTCGATCTTTCCCTCCCTTGGCTTTTGGCCTTGG
CTACAGCTGCTTCGTCATCGCACCTGGCTCCCCCCCGGATTATACTAATA
CTGACTTGACCTTGTCAGTTATGTTGGAACGTTGCATGAGATCAATCCTG
AAGCCTCCACCATAGCTCTGGAGAATGTTGTCTCTTTCGGGACCGAGGGT
CGTCGAGGCAATCCCGCTGAGGAGATTGCCCCGTCGGCCAGCGTCTACGA
ATATATTGTCTTCCGAGGCAGTGACGTAAAAGACATTAGCGTAGCAGAGG
ACACGAAGGAGAACACTCCACCTGAACCTCCTCAGGTGCCGGATGATCCC
GCCATCTTAGGGGTAAGTTTATCAACTCACAACTTCATTCCAAACCTTGC
CTGCCCTTTGAGTGCTTTGCGTCCACGGACTTGTTCCGTATGGACACTCG
ATCAAATGATGAAATATTTCGGATGTAAACTCACAGACCTGTTCCGAATT
GCGCAAACAATTCATGTGGATATTTTCCGTTGCCTTCCTTCTGAATGATC
GAGAAGCAAAGCACTCTTAATCTTGCCTTGTCACACATATTCTCTTTCTC
AAGCCATGATACTAATTAAGTTTCATGAAAACAGAGTATGTCTCGTCCGG
GACCTACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTCAGGTGCCTCGT
CCGGCGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAAGGCTTCTATCC
TCCATATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCCTGGACCTGGTT
TTCCTAATATGCCGTATGGAGCCCCGCCACCAGGATGGTTTCCTCCCCCG
GGTCAAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCCCAGATGCCTAT
TGGACCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCGACAGGGGGTAC
CTGGCGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTGAGCTTCCCGTT
GGTGACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCTACACCCGCGCC
TGGAGTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGAATCGAAACCAT
CTGTAACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTGCTGCCGCGGCT
CCGACTCCGGCCAAGATGCCACCTACTGGACCCCGGAGTGGACGTGTGCA
GCCGGCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGTTCCTGCTGTAA
GCAATCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGCAAGGTACCGCT
CAGGCGGCCATTACCGAGGCTACGCGTGCTGCCACGGCTGCTGTTGCGGC
GGCTATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAAGCCTGCGCATG
GAGAAGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGGAAATGAAGCCG
TATGAGGGCAACCGCGCACCCCGTGGTCATCAGCATCCCCGCGGACGTGG
CGGTCACCGTGCCCCATATCAGGGACAGTCGAAGAAGGTTGAGGTTCCTG
ATACGGACTACGACTTCGAGACTGCCAACGCCAAATTCAACAAGCAAGAC
CTGGTCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCATGAGGCTGAGAC
TGCTTCCATCACTAACGGGGACATTGAAGCGCCTGATACCAGCGCTGATT
CCGTGGCTACCTACAACCGGGCGACTTCTTTCTTCGATAACATCTCGAGC
GAGGCTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTGGGTGGCCGTGA
ATGGCGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTTCGGGCAGGGTA
GCGTTGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCAGAGGAAGAGGC
TATGGTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCTCGGGGTCGTGG
AGGCCTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGGCGTGCCTACCC
AGACATAGGCGAACCCTCGTCTGACCATACTTATTCTTCCATGTTGAAAC
TTATTACCATGCGTTTAGCGTTTTGAGTGGCTTTGTCTTTTTACTTTTCT
TATCTTGCTTTTCTTTGTGCGCTTTGGGGAGTATTGAAATCCTTCCACAA
CTTTCTGCTTCTGATATCCCTGGCGTCTGATGGAGCATCCTACGAGTACT
TGAGCTTGGCATTGTACATGTCGGGACATTTCGGATTGTGATTGGGATCA
CTATGGGTTACGGTGGGATTGGTGAGCTTCGTGGCTGAAAGGCTACGGTT
GCATCTGGTGTCAAATTTGGCGTTAAATAGTCGCATGGGTTGGTCGTGGG
CCTCCTTTGCCTTGCTTGTCTGGACGATGATCATGTCTTCTTTCTTGATG
ATGCCCGCCCGAGGAAAGGGCGAGGCTTTTGCCTGAGTCTGACGCTCCCA
GAAGCTGCTCTGGTGGACTCGAGTCTATGTATCATACTACGAGATGATTC
CCCTTCGCATGCAAAACCCAAAAAAAGGAGGCCAATTGGTCTACCAACAG
CTGTCTTCTGCTCGTAGTTTAGT back to topCoding sequence (CDS) from alignment at ch8:2909032..2911904+ >KJC3_012218-T1 ID=KJC3_012218-T1|Name=KJC3_012218-T1|organism=Aspergillus niger KJC3|type=CDS|length=6708bp|location=Sequence derived from alignment at ch8:2909032..2911904+ (Aspergillus niger KJC3)
ATGGATATGAACCATTTAATAGGTCAGCGTTTCAACCTGATCTCCAAGAG
TGACATTCGTTATGTTGGAACGTTGCATGAGATCAATCCTGAAGCCTCCA
CCATAGCTCTGGAGAATGTTGTCTCTTTCGGGACCGAGGGTCGTCGAGGC
AATCCCGCTGAGGAGATTGCCCCGTCGGCCAGCGTCTACGAATATATTGT
CTTCCGAGGCAGTGACGTAAAAGACATTAGCGTAGCAGAGGACACGAAGG
AGAACACTCCACCTGAACCTCCTCAGGTGCCGGATGATCCCGCCATCTTA
GGGAGTATGTCTCGTCCGGGACCTACTTCCCAGGGCTTGCCTCCGTCACA
ACAGCCTCAGGTGCCTCGTCCGGCGCCTCCTGGCTACCCTCAACAACCGC
AGTTCCAAGGCTTCTATCCTCCATATGGACAACGCTTTGGAGCCCCCGGT
TTCCCTCCTGGACCTGGTTTTCCTAATATGCCGTATGGAGCCCCGCCACC
AGGATGGTTTCCTCCCCCGGGTCAAGGATTCCCCCAAGGACCAGGCCAGT
TCCCTCCCCAGATGCCTATTGGACCCCCTGGCCAACACCAGACCCCTCCT
CCGCAGCGACAGGGGGTACCTGGCGCAGGCCCCGTAAATGTCCCTAAACC
CACCTCTGAGCTTCCCGTTGGTGACCGGCCGTCCAGTAAGCCAGCCAGCC
GGAATGCTACACCCGCGCCTGGAGTCTCTGCTCAGAATGCTCCTCCGCCC
CCTGTTGAATCGAAACCATCTGTAACGGAGGCCGTACAAGCCTCCAGTAT
TCCTGCTGCTGCCGCGGCTCCGACTCCGGCCAAGATGCCACCTACTGGAC
CCCGGAGTGGACGTGTGCAGCCGGCGATTCCGATCTCTGCTCCCTCCAAG
CCACCTGTTCCTGCTGTAAGCAATCCTCCTGTCCCTGGCGCTGGGAGCAG
TGTGCCGCAAGGTACCGCTCAGGCGGCCATTACCGAGGCTACGCGTGCTG
CCACGGCTGCTGTTGCGGCGGCTATGGCCAAGCTGCCCCAGCCAAACGCG
CCCAAGAAGCCTGCGCATGGAGAAGTGTCCGTTGAAGGAGTAACGAGACA
GATGGCGGAAATGAAGCCGTATGAGGGCAACCGCGCACCCCGTGGTCATC
AGCATCCCCGCGGACGTGGCGGTCACCGTGCCCCATATCAGGGACAGTCG
AAGAAGGTTGAGGTTCCTGATACGGACTACGACTTCGAGACTGCCAACGC
CAAATTCAACAAGCAAGACCTGGTCAAGGAGGCCATTGCCACTGGGTCGC
CTGCCCATGAGGCTGAGACTGCTTCCATCACTAACGGGGACATTGAAGCG
CCTGATACCAGCGCTGATTCCGTGGCTACCTACAACCGGGCGACTTCTTT
CTTCGATAACATCTCGAGCGAGGCTCGTGATCGTGAAGAGGGAACGGGAG
GCCGTGTGGGTGGCCGTGAATGGCGCGGCGAGGAGGAGAAGCGCAATATC
GAGACCTTCGGGCAGGGTAGCGTTGACGGTTACCGGGGAAGCTACCGTGG
CCGTGGCAGAGGAAGAGGCTATGGTCGTGGCCGCGGTGGCTACGGACGTG
GGTACTCTCGGGGTCGTGGAGGCCTTCGTGGAGGTCGCAACACTTCGCAA
GCCACCGGCGTGCCTACCCAGACATAGATGGATATGAACCATTTAATAGG
TCAGCGTTTCAACCTGATCTCCAAGAGTGACATTCGTTATGTTGGAACGT
TGCATGAGATCAATCCTGAAGCCTCCACCATAGCTCTGGAGAATGTTGTC
TCTTTCGGGACCGAGGGTCGTCGAGGCAATCCCGCTGAGGAGATTGCCCC
GTCGGCCAGCGTCTACGAATATATTGTCTTCCGAGGCAGTGACGTAAAAG
ACATTAGCGTAGCAGAGGACACGAAGGAGAACACTCCACCTGAACCTCCT
CAGGTGCCGGATGATCCCGCCATCTTAGGGAGTATGTCTCGTCCGGGACC
TACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTCAGGTGCCTCGTCCGG
CGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAAGGCTTCTATCCTCCA
TATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCCTGGACCTGGTTTTCC
TAATATGCCGTATGGAGCCCCGCCACCAGGATGGTTTCCTCCCCCGGGTC
AAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCCCAGATGCCTATTGGA
CCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCGACAGGGGGTACCTGG
CGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTGAGCTTCCCGTTGGTG
ACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCTACACCCGCGCCTGGA
GTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGAATCGAAACCATCTGT
AACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTGCTGCCGCGGCTCCGA
CTCCGGCCAAGATGCCACCTACTGGACCCCGGAGTGGACGTGTGCAGCCG
GCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGTTCCTGCTGTAAGCAA
TCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGCAAGGTACCGCTCAGG
CGGCCATTACCGAGGCTACGCGTGCTGCCACGGCTGCTGTTGCGGCGGCT
ATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAAGCCTGCGCATGGAGA
AGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGGAAATGAAGCCGTATG
AGGGCAACCGCGCACCCCGTGGTCATCAGCATCCCCGCGGACGTGGCGGT
CACCGTGCCCCATATCAGGGACAGTCGAAGAAGGTTGAGGTTCCTGATAC
GGACTACGACTTCGAGACTGCCAACGCCAAATTCAACAAGCAAGACCTGG
TCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCATGAGGCTGAGACTGCT
TCCATCACTAACGGGGACATTGAAGCGCCTGATACCAGCGCTGATTCCGT
GGCTACCTACAACCGGGCGACTTCTTTCTTCGATAACATCTCGAGCGAGG
CTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTGGGTGGCCGTGAATGG
CGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTTCGGGCAGGGTAGCGT
TGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCAGAGGAAGAGGCTATG
GTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCTCGGGGTCGTGGAGGC
CTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGGCGTGCCTACCCAGAC
ATAGATGGATATGAACCATTTAATAGGTCAGCGTTTCAACCTGATCTCCA
AGAGTGACATTCGTTATGTTGGAACGTTGCATGAGATCAATCCTGAAGCC
TCCACCATAGCTCTGGAGAATGTTGTCTCTTTCGGGACCGAGGGTCGTCG
AGGCAATCCCGCTGAGGAGATTGCCCCGTCGGCCAGCGTCTACGAATATA
TTGTCTTCCGAGGCAGTGACGTAAAAGACATTAGCGTAGCAGAGGACACG
AAGGAGAACACTCCACCTGAACCTCCTCAGGTGCCGGATGATCCCGCCAT
CTTAGGGAGTATGTCTCGTCCGGGACCTACTTCCCAGGGCTTGCCTCCGT
CACAACAGCCTCAGGTGCCTCGTCCGGCGCCTCCTGGCTACCCTCAACAA
CCGCAGTTCCAAGGCTTCTATCCTCCATATGGACAACGCTTTGGAGCCCC
CGGTTTCCCTCCTGGACCTGGTTTTCCTAATATGCCGTATGGAGCCCCGC
CACCAGGATGGTTTCCTCCCCCGGGTCAAGGATTCCCCCAAGGACCAGGC
CAGTTCCCTCCCCAGATGCCTATTGGACCCCCTGGCCAACACCAGACCCC
TCCTCCGCAGCGACAGGGGGTACCTGGCGCAGGCCCCGTAAATGTCCCTA
AACCCACCTCTGAGCTTCCCGTTGGTGACCGGCCGTCCAGTAAGCCAGCC
AGCCGGAATGCTACACCCGCGCCTGGAGTCTCTGCTCAGAATGCTCCTCC
GCCCCCTGTTGAATCGAAACCATCTGTAACGGAGGCCGTACAAGCCTCCA
GTATTCCTGCTGCTGCCGCGGCTCCGACTCCGGCCAAGATGCCACCTACT
GGACCCCGGAGTGGACGTGTGCAGCCGGCGATTCCGATCTCTGCTCCCTC
CAAGCCACCTGTTCCTGCTGTAAGCAATCCTCCTGTCCCTGGCGCTGGGA
GCAGTGTGCCGCAAGGTACCGCTCAGGCGGCCATTACCGAGGCTACGCGT
GCTGCCACGGCTGCTGTTGCGGCGGCTATGGCCAAGCTGCCCCAGCCAAA
CGCGCCCAAGAAGCCTGCGCATGGAGAAGTGTCCGTTGAAGGAGTAACGA
GACAGATGGCGGAAATGAAGCCGTATGAGGGCAACCGCGCACCCCGTGGT
CATCAGCATCCCCGCGGACGTGGCGGTCACCGTGCCCCATATCAGGGACA
GTCGAAGAAGGTTGAGGTTCCTGATACGGACTACGACTTCGAGACTGCCA
ACGCCAAATTCAACAAGCAAGACCTGGTCAAGGAGGCCATTGCCACTGGG
TCGCCTGCCCATGAGGCTGAGACTGCTTCCATCACTAACGGGGACATTGA
AGCGCCTGATACCAGCGCTGATTCCGTGGCTACCTACAACCGGGCGACTT
CTTTCTTCGATAACATCTCGAGCGAGGCTCGTGATCGTGAAGAGGGAACG
GGAGGCCGTGTGGGTGGCCGTGAATGGCGCGGCGAGGAGGAGAAGCGCAA
TATCGAGACCTTCGGGCAGGGTAGCGTTGACGGTTACCGGGGAAGCTACC
GTGGCCGTGGCAGAGGAAGAGGCTATGGTCGTGGCCGCGGTGGCTACGGA
CGTGGGTACTCTCGGGGTCGTGGAGGCCTTCGTGGAGGTCGCAACACTTC
GCAAGCCACCGGCGTGCCTACCCAGACATAGATGGATATGAACCATTTAA
TAGGTCAGCGTTTCAACCTGATCTCCAAGAGTGACATTCGTTATGTTGGA
ACGTTGCATGAGATCAATCCTGAAGCCTCCACCATAGCTCTGGAGAATGT
TGTCTCTTTCGGGACCGAGGGTCGTCGAGGCAATCCCGCTGAGGAGATTG
CCCCGTCGGCCAGCGTCTACGAATATATTGTCTTCCGAGGCAGTGACGTA
AAAGACATTAGCGTAGCAGAGGACACGAAGGAGAACACTCCACCTGAACC
TCCTCAGGTGCCGGATGATCCCGCCATCTTAGGGAGTATGTCTCGTCCGG
GACCTACTTCCCAGGGCTTGCCTCCGTCACAACAGCCTCAGGTGCCTCGT
CCGGCGCCTCCTGGCTACCCTCAACAACCGCAGTTCCAAGGCTTCTATCC
TCCATATGGACAACGCTTTGGAGCCCCCGGTTTCCCTCCTGGACCTGGTT
TTCCTAATATGCCGTATGGAGCCCCGCCACCAGGATGGTTTCCTCCCCCG
GGTCAAGGATTCCCCCAAGGACCAGGCCAGTTCCCTCCCCAGATGCCTAT
TGGACCCCCTGGCCAACACCAGACCCCTCCTCCGCAGCGACAGGGGGTAC
CTGGCGCAGGCCCCGTAAATGTCCCTAAACCCACCTCTGAGCTTCCCGTT
GGTGACCGGCCGTCCAGTAAGCCAGCCAGCCGGAATGCTACACCCGCGCC
TGGAGTCTCTGCTCAGAATGCTCCTCCGCCCCCTGTTGAATCGAAACCAT
CTGTAACGGAGGCCGTACAAGCCTCCAGTATTCCTGCTGCTGCCGCGGCT
CCGACTCCGGCCAAGATGCCACCTACTGGACCCCGGAGTGGACGTGTGCA
GCCGGCGATTCCGATCTCTGCTCCCTCCAAGCCACCTGTTCCTGCTGTAA
GCAATCCTCCTGTCCCTGGCGCTGGGAGCAGTGTGCCGCAAGGTACCGCT
CAGGCGGCCATTACCGAGGCTACGCGTGCTGCCACGGCTGCTGTTGCGGC
GGCTATGGCCAAGCTGCCCCAGCCAAACGCGCCCAAGAAGCCTGCGCATG
GAGAAGTGTCCGTTGAAGGAGTAACGAGACAGATGGCGGAAATGAAGCCG
TATGAGGGCAACCGCGCACCCCGTGGTCATCAGCATCCCCGCGGACGTGG
CGGTCACCGTGCCCCATATCAGGGACAGTCGAAGAAGGTTGAGGTTCCTG
ATACGGACTACGACTTCGAGACTGCCAACGCCAAATTCAACAAGCAAGAC
CTGGTCAAGGAGGCCATTGCCACTGGGTCGCCTGCCCATGAGGCTGAGAC
TGCTTCCATCACTAACGGGGACATTGAAGCGCCTGATACCAGCGCTGATT
CCGTGGCTACCTACAACCGGGCGACTTCTTTCTTCGATAACATCTCGAGC
GAGGCTCGTGATCGTGAAGAGGGAACGGGAGGCCGTGTGGGTGGCCGTGA
ATGGCGCGGCGAGGAGGAGAAGCGCAATATCGAGACCTTCGGGCAGGGTA
GCGTTGACGGTTACCGGGGAAGCTACCGTGGCCGTGGCAGAGGAAGAGGC
TATGGTCGTGGCCGCGGTGGCTACGGACGTGGGTACTCTCGGGGTCGTGG
AGGCCTTCGTGGAGGTCGCAACACTTCGCAAGCCACCGGCGTGCCTACCC
AGACATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012218-T1.utr5p1 | KJC3_012218-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012218-T1.utr3p1 | KJC3_012218-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR025761 |
| DBxref | InterPro:IPR025768 |
| DBxref | InterPro:IPR025762 |
| DBxref | InterPro:IPR025609 |
| DBxref | InterPro:IPR019050 |
| DBxref | PFAM:PF12701 |
| DBxref | PFAM:PF09532 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2909032..2911904 + |
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