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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2933273..2936992- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012224-T1 ID=KJC3_012224-T1|Name=KJC3_012224-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3720bp|location=Sequence derived from alignment at ch8:2933273..2936992- (Aspergillus niger KJC3)
GGCAAGTAAGTACGTAGGTTTTTTTATTTTTCTTTTCTCTTTTTTGCCTG
GCTGGGGCTTGCGTTTGTTAAAGTTTTTCCACCCGCGCCGCCGAAAGTCT
AAGGCCATTCATCCATCCCAGTAAGTGGATTCTGCCGCTTTGTGTTCGAG
TCGTGGAGCTGGAATACTACTTTTGTACATGCTGTAAGGCGCGCCACTAC
TGTCTCTCAACTAGATACATTCTGCATGCGGAGGAAATCACATGGGGGTT
TCTTTCCGTTCGATCGAGACCTTTTTCCACGCTCAGGACCGTCCGAGTGC
AAAGTCGATGATCCATCAACCTCTGTTGAATTTGGACGCACGCATTGGGT
TGGGTGAAGCTGGTTGGTGGGATGGAGATACCACGGCATGTGAAGAAGTT
GGAAAAGAATCAGAAGGGTCTGTTACAGCGGCATGGCTTCAGCCCCTGGG
GGGCGCAAAGCAAGCAGTGAGCATCCCTACTCTTTATGTTTGTAGCTCAG
CTGGGGTCCTCTCCAATTCTGATTTCTGATAAGATGCCCGAATCATCTCC
GACCCATTCCATTCACACTAGTCTCTCTGAGACGAGACGAGACGCCTTGT
GTGTTTCCTCGTCTCCATCGGAGGTGTCATCTGTCCTCGCATGGTGACTG
GTGAGATTGACCAGTAAAAATTATCCGAATGCCACAGGGCCAACGACCAG
CCCCCTCCGATAATCAAGTGGGATATAATAACCGTAATTCTTCATCCGGG
TTCATGCCCACCGCCCAAGGGGGAAGCTGCCAAGATTGTTGAGAAGCCAA
TTCTCCTCTTCTTACCCGGCTGTGGGGCCTGAGGTCAAGCTCCCATTGGT
TCCAGCGGGGCGGTGAGCCTCCGCGGTTCATGGTCCCTGGTAACCACGCT
CGGGTTTCTGGAACGTGAAGTATTTTGCAATACTCGAGCCACATGGCCGG
TTAGTCAGGAGTGCAACCACATCTTATGATCTTCTGGCGTGCGGTGAGAG
CCATGCGGTGGAGGATCTCGGCTTAAGGGGGGCAAAGAATAATCCCTCAG
CACACCCCGGAATGCAAAAATGACACTCCTCCCTTCTGGCAATCAGGCCC
GGACGGATCAGCCGCCCCCTTCCAGCAAGCAACAGGTGGCGTATACCTCC
CACCAACCAGTCACGGATGGGCCGCAACCTAGAGGGTTCGTAGGCATGCG
CATCTCGGGCAAGCCACAGACAGACTCCGCGACGACCTCGGCTCAGGTAT
CCAGACTCGAGCAGATTAACTTCCTACTACCTTGCCAGATGCGACGATCG
AGCCAGTGATGAAACCATCTGCAGATGTAGAGCATGTCACGCAAAAGGCA
AATTGCGCTGAGATGGTCCAGTAAGCGTCTCCGAGGTTATCCATCCACCC
GATCTCTTCTGTAGGCCAAAATGACAGGACAGAGTGAGATGAGAATACTG
CAAAATGTAATGCCGTCGGGTCGTAATCTTCTCGTAAGTCGGGACGCCGT
CCCGTATTGACGCGCCAGCCCCTGACCAATGAGAGTTGTCCCACCCAATA
CAAAATTTTCGCGGGAGATCCCCCGTAACGCAAAATTACCAGCCCAGGGG
CCCGGCGAGACTTGCATCCAGATCGGGTGTTTCTGGATGGCTTGTCTTCT
GGGCTTCTTCTTCGACTGCACTGGAAATTCAGTCTTCCCCAATCAATTCG
CGTTTGTTTGGTTCTTGGGTGTTCCCCCTTACCTTTTCCTCTTTTGCAAT
TTTTCCTTTTCGCCCTCTTTTCGGAACCCTCATTTTCTTTTTTTTTGTTT
TGCCTCCCCCCTCCTCTCCCCGGGTTCTGCTGAACGCTGAACAGGTGATC
ATCAAACAATCGCCCTTCTTTTTTTTCTTTCACTGTTTTCGCCTCTGTCC
ATCCGCTTTTTTTTCCCTCCCTTTGAACCCCCCCGTCCCACTTCTTTCTC
CGGTCAAGGCTCTTTGGAGGCGACCATTTATATCTTTCCGATTGTCACCC
TACCTCTCCTTCCCTCCTCTCTTCTCTCCCGATCCCATCCCTCCGTCTCC
TTCGCTGCGTGGGAGCTCAACTCCGTCCAGTGCCTACCTTGAGCTGCTAC
AGCTTTGGCGCCGTGTTTTGACCCATTGGTACGTTGCACTTTGCGTGACC
TGTTCTTCGCACATGCTGTGGCATTGAACCCGGGCTAACAGAGCTTCCAA
CCTTTAGACTTCGCCGTCTTTGAGCTCGAGAAAACCTTTTTGTGGGCAAG
CTCCAATATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGCA
ATGCTACGGACTCGTCCGTCCCCAGCTCGGTCACCCCCTCCCCGCTGGAC
AGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGGA
GGCAGAGGCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAGA
TCCCGGATTATACCATCAAGCAGATCCGTGATGCCATTCCCGCTCATTGC
TATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCTT
CTGGCTCGCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAGA
CCGTCCCTTACAAGCCCGCAAGAGTCGTGCTGTGGGCTCTTTACACCATC
GTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCGG
CCACCAGGCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGGA
TCTGCCATTCCGCCCTGCTGGTGCCCTACTTCTCCTGGAAGATCTCCCAC
GGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCGT
GCCCAAGACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCACG
AACTCAATGAGTTGATGGAGGAAACTCCCATCGCCACTGCCCTCAACCTC
CTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCAC
CGGTCACAACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAGC
AGAACGGCTACTTCGGCGGTGTCAACCACTTCAACCCATCTAGCCCTCTG
TACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTGC
CATTGTCGGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATGA
ACCTTCTGGTTTGGTACGGTATCCCCTACCTCTGGGTGAACCACTGGCTG
GGTAAGTTACTTTCTTCACAAACTGGCACAATTGCTGGAACGAATACTGA
CCTAAAGATATAGTCGCCATCACCTACCTCCAGCACACCGATCCCACTCT
CCCCCACTACCAGCCTGATGTCTGGAACTTCGCCCGCGGTGCCGCCGCCA
CCATCGACCGTGACTTCGGCTTCGTCGGCCGTCACATCTTCCACGGTATC
ATTGAGACCCACGTTCTCCACCACTATGTCAGCACCATCCCCTTCTACAA
CGCCGATGAGGCCAGCGAGGCCATCAAGAAGGTCATGGGATCTCACTACC
GGACCGAAGCCCACACTGGCTGGACCGGATTCTTCAAGGCTCTCTGGACT
AGTGCCCGTGTGTGCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGA
GAGCTCTGGAGTGCTCTTCTACCGTAACACGAACGGCATTGGAGTTCCTC
CTGCCAAGCTTGAAAAATAG back to topCoding sequence (CDS) from alignment at ch8:2933273..2936992- >KJC3_012224-T1 ID=KJC3_012224-T1|Name=KJC3_012224-T1|organism=Aspergillus niger KJC3|type=CDS|length=2802bp|location=Sequence derived from alignment at ch8:2933273..2936992- (Aspergillus niger KJC3)
TCGCCATCACCTACCTCCAGCACACCGATCCCACTCTCCCCCACTACCAG
CCTGATGTCTGGAACTTCGCCCGCGGTGCCGCCGCCACCATCGACCGTGA
CTTCGGCTTCGTCGGCCGTCACATCTTCCACGGTATCATTGAGACCCACG
TTCTCCACCACTATGTCAGCACCATCCCCTTCTACAACGCCGATGAGGCC
AGCGAGGCCATCAAGAAGGTCATGGGATCTCACTACCGGACCGAAGCCCA
CACTGGCTGGACCGGATTCTTCAAGGCTCTCTGGACTAGTGCCCGTGTGT
GCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGAGAGCTCTGGAGTG
CTCTTCTACCGTAACACGAACGGCATTGGAGTTCCTCCTGCCAAGCTTGA
AAAATAGATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGCA
ATGCTACGGACTCGTCCGTCCCCAGCTCGGTCACCCCCTCCCCGCTGGAC
AGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGGA
GGCAGAGGCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAGA
TCCCGGATTATACCATCAAGCAGATCCGTGATGCCATTCCCGCTCATTGC
TATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCTT
CTGGCTCGCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAGA
CCGTCCCTTACAAGCCCGCAAGAGTCGTGCTGTGGGCTCTTTACACCATC
GTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCGG
CCACCAGGCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGGA
TCTGCCATTCCGCCCTGCTGGTGCCCTACTTCTCCTGGAAGATCTCCCAC
GGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCGT
GCCCAAGACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCACG
AACTCAATGAGTTGATGGAGGAAACTCCCATCGCCACTGCCCTCAACCTC
CTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCAC
CGGTCACAACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAGC
AGAACGGCTACTTCGGCGGTGTCAACCACTTCAACCCATCTAGCCCTCTG
TACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTGC
CATTGTCGGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATGA
ACCTTCTGGTTTGGTACGGTATCCCCTACCTCTGGGTGAACCACTGGCTG
GTCGCCATCACCTACCTCCAGCACACCGATCCCACTCTCCCCCACTACCA
GCCTGATGTCTGGAACTTCGCCCGCGGTGCCGCCGCCACCATCGACCGTG
ACTTCGGCTTCGTCGGCCGTCACATCTTCCACGGTATCATTGAGACCCAC
GTTCTCCACCACTATGTCAGCACCATCCCCTTCTACAACGCCGATGAGGC
CAGCGAGGCCATCAAGAAGGTCATGGGATCTCACTACCGGACCGAAGCCC
ACACTGGCTGGACCGGATTCTTCAAGGCTCTCTGGACTAGTGCCCGTGTG
TGCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGAGAGCTCTGGAGT
GCTCTTCTACCGTAACACGAACGGCATTGGAGTTCCTCCTGCCAAGCTTG
AAAAATAGATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGC
AATGCTACGGACTCGTCCGTCCCCAGCTCGGTCACCCCCTCCCCGCTGGA
CAGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGG
AGGCAGAGGCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAG
ATCCCGGATTATACCATCAAGCAGATCCGTGATGCCATTCCCGCTCATTG
CTATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCT
TCTGGCTCGCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAG
ACCGTCCCTTACAAGCCCGCAAGAGTCGTGCTGTGGGCTCTTTACACCAT
CGTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCG
GCCACCAGGCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGG
ATCTGCCATTCCGCCCTGCTGGTGCCCTACTTCTCCTGGAAGATCTCCCA
CGGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCG
TGCCCAAGACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCAC
GAACTCAATGAGTTGATGGAGGAAACTCCCATCGCCACTGCCCTCAACCT
CCTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCA
CCGGTCACAACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAG
CAGAACGGCTACTTCGGCGGTGTCAACCACTTCAACCCATCTAGCCCTCT
GTACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTG
CCATTGTCGGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATG
AACCTTCTGGTTTGGTACGGTATCCCCTACCTCTGGGTGAACCACTGGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005804 |
| DBxref | PFAM:PF00487 |
| Product | Oleate hydroxylase fah12 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2933273..2936992 - |
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