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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2968204..2970068- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012234-T2 ID=KJC3_012234-T2|Name=KJC3_012234-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1865bp|location=Sequence derived from alignment at ch8:2968204..2970068- (Aspergillus niger KJC3)
CCCTGAATGTCATTCTAGTTTTATGATTTCACATCACAGCCAGCATCTCG
ACCGAGCTCCCCGTTTCACATCCTACTAAGTCGCGCATACAACTGGAGCT
ATCTCCACCAAATCATGCACTTTATTATATCAACAGATAACAAAAAGCCC
GACAGAAGTACCCGTCGACTTATCCGAAGCCATGTAATGCAAGGCATAAA
CAAAGGGCGGCCTCGATACGACCGACGGAAAAAACCCAGTCCGATACAGC
AGGATCAGCTTCCATCGCCACAATTAACAGAAATCTATCAGGACTCCGAC
ATTATCCAGTCGAACAAACTAGTCGTGGGGCCTGACCCGTCTTTCGCTCA
ATTCGCCGTTCAAGTGGACTCCCGCACCTTCGCTGATATACTACGATGTA
AGTAGGTTCTCCCGTATCCTAACCTATCGTTCGTTTGCGTAGCTAACGCG
AACACCATTTAGTCGCCAAATTATCAATGCAAATGTTCTTCCCATTGGGC
TTCTTGATTGACTTCGACAAAAGGGATAAATCCTGGTTTCATGACTCTAT
ACGCTCCGATGCAGCGTATCTGCATCTCACCGTGTCCGCATCAGAGGTAT
TCATGGGCTCGGTTCACGGTCGACAGAATGCCGATGAACTACTTGCTAAT
CGCAGGACCATGCTCCATTTTGCAAAGGGCGTGCAGATCCTCCGCGAGAG
ACTGACGGGCGTCGATCTCCAGACAAAAATATCCGACTTCACTGTACGAA
CCGTACTAATGCTAGCCATGACAGCGCATCTGATGGGCGAGTCGGAGGTC
GCGCAGAAACACATGGAGGGAATTCGAACAATCATGGACCTTCGAGGAGG
TCTGCGCTTATTTGAAAGCCAGAAGATTCTCATCGAGCTGTTCAGGTAAG
CCACCTACTTCCCCATAACAGCCAACCTACTACAATAATTGACCACCATT
AGATGGGACCTAGGCCTCGCCCTCCAAAACAACACCACGCCCATGTTCTT
CAGAGACAAATTCCTCGAGCCACTCACTCCATTCCCCACCATCTTCAACC
CCACCTTGAACCAAATTAACAATCCCCTCCTCCCCCAACTCCATTTAGAC
CCAACCCTAAAGACAACCTTTCACGTCCTCCAAAACTTCTGCACCCTAAT
CAACACAAGCATCACCGAGACCCCCCAACGCCGCCTCTCCCCAGACATCA
TCCCTTCCACGCTCTCCTCCGTAATGTATCGTCTTCTCCAAATGCCTTTC
CCCATGAACAGCAACAACGAAGCCTTCCGTCTAGGTCTCCTCACCTTCTG
CCATCATACCTTCCTTCAGTGGCAGGATAAGACACTGCCTTTTGTATTTT
TCCCTGCCTCGTATCAATCATGTCTCTTGTCGTTGATGGAACAATGCCAA
CGTCGTCAAGATGAGGAGGAGGATTCCTCGGAACTTATCCTCTGGCTATT
GATGGTCGGGATCCTTGCATTGCCGCCGCTGCCGTCGTTTCTGGGGACGG
ATCTCTGGATGAGGGGGTATTTGCGGGAGTGGTTGGAGAAGTTGGAGATC
AGGACGTGGGGGGAGTTGCGGGGGATTATGAAGAGGTGGGTGTGGGTGGA
TTTGATGCATGATCTTGCTGGGGAGGGAGTGTTGGGTGATGTGCTAAAAG
TATAATTGGTGCCGATAGTAGTTCATTTGGTATTATGTTGTTTATCGGCA
TCAAACACTAAGAGTAATACTCTCAGGTGTTTGAAATCGGGGTATAGCAG
TAAAAATTTATTTGTCTTCATTGGAAAGGTGGCGAACGACTTGGACTGTC
GTGTCATAACTGACTTAATATGTGGCGCTGTTACTCCAATTAAGGGTAAT
CTTCACCCTACTGGG back to topCoding sequence (CDS) from alignment at ch8:2968204..2970068- >KJC3_012234-T2 ID=KJC3_012234-T2|Name=KJC3_012234-T2|organism=Aspergillus niger KJC3|type=CDS|length=2244bp|location=Sequence derived from alignment at ch8:2968204..2970068- (Aspergillus niger KJC3)
ATGGGACCTAGGCCTCGCCCTCCAAAACAACACCACGCCCATGTTCTTCA
GAGACAAATTCCTCGAGCCACTCACTCCATTCCCCACCATCTTCAACCCC
ACCTTGAACCAAATTAACAATCCCCTCCTCCCCCAACTCCATTTAGACCC
AACCCTAAAGACAACCTTTCACGTCCTCCAAAACTTCTGCACCCTAATCA
ACACAAGCATCACCGAGACCCCCCAACGCCGCCTCTCCCCAGACATCATC
CCTTCCACGCTCTCCTCCGTAATGTATCGTCTTCTCCAAATGCCTTTCCC
CATGAACAGCAACAACGAAGCCTTCCGTCTAGGTCTCCTCACCTTCTGCC
ATCATACCTTCCTTCAGTGGCAGGATAAGACACTGCCTTTTGTATTTTTC
CCTGCCTCGTATCAATCATGTCTCTTGTCGTTGATGGAACAATGCCAACG
TCGTCAAGATGAGGAGGAGGATTCCTCGGAACTTATCCTCTGGCTATTGA
TGGTCGGGATCCTTGCATTGCCGCCGCTGCCGTCGTTTCTGGGGACGGAT
CTCTGGATGAGGGGGTATTTGCGGGAGTGGTTGGAGAAGTTGGAGATCAG
GACGTGGGGGGAGTTGCGGGGGATTATGAAGAGGTGGGTGTGGGTGGATT
TGATGCATGATCTTGCTGGGGAGGGAGTGTTGGGTGATGTGCTAAAAGTA
TAAATGCAAATGTTCTTCCCATTGGGCTTCTTGATTGACTTCGACAAAAG
GGATAAATCCTGGTTTCATGACTCTATACGCTCCGATGCAGCGTATCTGC
ATCTCACCGTGTCCGCATCAGAGGTATTCATGGGCTCGGTTCACGGTCGA
CAGAATGCCGATGAACTACTTGCTAATCGCAGGACCATGCTCCATTTTGC
AAAGGGCGTGCAGATCCTCCGCGAGAGACTGACGGGCGTCGATCTCCAGA
CAAAAATATCCGACTTCACTGTACGAACCGTACTAATGCTAGCCATGACA
GCGCATCTGATGGGCGAGTCGGAGGTCGCGCAGAAACACATGGAGGGAAT
TCGAACAATCATGGACCTTCGAGGAGGTCTGCGCTTATTTGAAAGCCAGA
AGATTCTCATCGAGCTGTTCAGATGGGACCTAGGCCTCGCCCTCCAAAAC
AACACCACGCCCATGTTCTTCAGAGACAAATTCCTCGAGCCACTCACTCC
ATTCCCCACCATCTTCAACCCCACCTTGAACCAAATTAACAATCCCCTCC
TCCCCCAACTCCATTTAGACCCAACCCTAAAGACAACCTTTCACGTCCTC
CAAAACTTCTGCACCCTAATCAACACAAGCATCACCGAGACCCCCCAACG
CCGCCTCTCCCCAGACATCATCCCTTCCACGCTCTCCTCCGTAATGTATC
GTCTTCTCCAAATGCCTTTCCCCATGAACAGCAACAACGAAGCCTTCCGT
CTAGGTCTCCTCACCTTCTGCCATCATACCTTCCTTCAGTGGCAGGATAA
GACACTGCCTTTTGTATTTTTCCCTGCCTCGTATCAATCATGTCTCTTGT
CGTTGATGGAACAATGCCAACGTCGTCAAGATGAGGAGGAGGATTCCTCG
GAACTTATCCTCTGGCTATTGATGGTCGGGATCCTTGCATTGCCGCCGCT
GCCGTCGTTTCTGGGGACGGATCTCTGGATGAGGGGGTATTTGCGGGAGT
GGTTGGAGAAGTTGGAGATCAGGACGTGGGGGGAGTTGCGGGGGATTATG
AAGAGGTGGGTGTGGGTGGATTTGATGCATGATCTTGCTGGGGAGGGAGT
GTTGGGTGATGTGCTAAAAGTATAAATGCAAATGTTCTTCCCATTGGGCT
TCTTGATTGACTTCGACAAAAGGGATAAATCCTGGTTTCATGACTCTATA
CGCTCCGATGCAGCGTATCTGCATCTCACCGTGTCCGCATCAGAGGTATT
CATGGGCTCGGTTCACGGTCGACAGAATGCCGATGAACTACTTGCTAATC
GCAGGACCATGCTCCATTTTGCAAAGGGCGTGCAGATCCTCCGCGAGAGA
CTGACGGGCGTCGATCTCCAGACAAAAATATCCGACTTCACTGTACGAAC
CGTACTAATGCTAGCCATGACAGCGCATCTGATGGGCGAGTCGGAGGTCG
CGCAGAAACACATGGAGGGAATTCGAACAATCATGGACCTTCGAGGAGGT
CTGCGCTTATTTGAAAGCCAGAAGATTCTCATCGAGCTGTTCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012234-T2.utr3p1 | KJC3_012234-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2968204..2970068 - |
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