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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3048851..3049414+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012262-T1 ID=KJC3_012262-T1|Name=KJC3_012262-T1|organism=Aspergillus niger KJC3|type=mRNA|length=564bp|location=Sequence derived from alignment at ch8:3048851..3049414+ (Aspergillus niger KJC3)
ACCTCTCTCTCAATCCACCTCCCCGATCCACCAACTGCAAAAATGCCCAC
CCGCCGCATCGCCCAAATCGTTCACCTCAAGCCGTCCGCCATCGCCGCAT
ACAAAGAATGTCACGCGAACGTATGGCCCGAAGTTCTACAGCAGATCAAG
GAGTGTAATATTTGCGATTGTACATTTCCCCCCCCCCCCCCCCCCCCCCC
CCCCCAGAATGCTCCTAATCATATATATAAAACAAGTGTAAGAGCTGATA
TGGGGCTATGTGCAGATTCTATATTTTTCGATAATGAGCGGACGCTGTTC
GCAACATTCAAGTATGTTGGAGAGGACTTTGAGGGGGATATGCAGCGCAT
GAAGGCGAATCCGAAGGTCAGGGAGTGGTGGGCTTTGACGGATGGGATGC
AGGTATGTTCATCAGTCAATCACTTTGTCGGATTGGAGAGGGGGAAAATG
TCAGTGATGCTTATATACGATTGTGTGCAGGAGAGTCCTATCCCTGGTGC
TGTTGGAAGTGCTGAAGGTCCTGGGTGGTGGAAGGTATTGGACGAGGTAT
TCTATACTGAATAA back to topCoding sequence (CDS) from alignment at ch8:3048851..3049414+ >KJC3_012262-T1 ID=KJC3_012262-T1|Name=KJC3_012262-T1|organism=Aspergillus niger KJC3|type=CDS|length=1044bp|location=Sequence derived from alignment at ch8:3048851..3049414+ (Aspergillus niger KJC3)
ATGCCCACCCGCCGCATCGCCCAAATCGTTCACCTCAAGCCGTCCGCCAT
CGCCGCATACAAAGAATGTCACGCGAACGTATGGCCCGAAGTTCTACAGC
AGATCAAGGAGTGTAATATTTGCGATTATTCTATATTTTTCGATAATGAG
CGGACGCTGTTCGCAACATTCAAGTATGTTGGAGAGGACTTTGAGGGGGA
TATGCAGCGCATGAAGGCGAATCCGAAGGTCAGGGAGTGGTGGGCTTTGA
CGGATGGGATGCAGGAGAGTCCTATCCCTGGTGCTGTTGGAAGTGCTGAA
GGTCCTGGGTGGTGGAAGGTATTGGACGAGGTATTCTATACTGAATAAAT
GCCCACCCGCCGCATCGCCCAAATCGTTCACCTCAAGCCGTCCGCCATCG
CCGCATACAAAGAATGTCACGCGAACGTATGGCCCGAAGTTCTACAGCAG
ATCAAGGAGTGTAATATTTGCGATTATTCTATATTTTTCGATAATGAGCG
GACGCTGTTCGCAACATTCAAGTATGTTGGAGAGGACTTTGAGGGGGATA
TGCAGCGCATGAAGGCGAATCCGAAGGTCAGGGAGTGGTGGGCTTTGACG
GATGGGATGCAGGAGAGTCCTATCCCTGGTGCTGTTGGAAGTGCTGAAGG
TCCTGGGTGGTGGAAGGTATTGGACGAGGTATTCTATACTGAATAAATGC
CCACCCGCCGCATCGCCCAAATCGTTCACCTCAAGCCGTCCGCCATCGCC
GCATACAAAGAATGTCACGCGAACGTATGGCCCGAAGTTCTACAGCAGAT
CAAGGAGTGTAATATTTGCGATTATTCTATATTTTTCGATAATGAGCGGA
CGCTGTTCGCAACATTCAAGTATGTTGGAGAGGACTTTGAGGGGGATATG
CAGCGCATGAAGGCGAATCCGAAGGTCAGGGAGTGGTGGGCTTTGACGGA
TGGGATGCAGGAGAGTCCTATCCCTGGTGCTGTTGGAAGTGCTGAAGGTC
CTGGGTGGTGGAAGGTATTGGACGAGGTATTCTATACTGAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012262-T1.utr5p1 | KJC3_012262-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011008 |
| DBxref | InterPro:IPR008000 |
| DBxref | PFAM:PF05336 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3048851..3049414 + |
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