|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3091184..3092748+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012276-T1 ID=KJC3_012276-T1|Name=KJC3_012276-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1565bp|location=Sequence derived from alignment at ch8:3091184..3092748+ (Aspergillus niger KJC3)
AATTAATGGTCCGGCTACCTCCACGCATCCATCTCCCGCTACCTTTATTC
ATTTTCTGATATCAACTCACAGAACGGTAACAACTACTTACCACTCAAAA
AAGCCAATTCAGGCCCCGTGACCTTCGCATATCCTCAACAGACAGGAAAG
GCATGCCACTTTCATATACGCCCTTGAATCGGTTATTTTCTCTAGTCGAT
CGCTAGCTCTCCCTGGCTGCCTCCCAAATTTGCCCAAATCAGCCATTGTC
GCTGATCCTTGGAAACACGCCACGGCATTCATAATAATCACACAAAACGC
ATCCCTTCCTCAGTTGCTATGCGACTCTTCGTCATCCCTATCTCGACGCG
ACAAGCTCTAATCTACGCTCGACCCCTCCGCCGTGGTCCGTCGCAGAAGC
CTTCGATACATGATCGGGTCATACAAAAGGCTGCAGAAACGTGGGCGAAA
TGGGAGGAGGCCGATAAGGGGTGGAAGAAGCATTTAGTATCCTGGGGTAA
TCGGGTGCAGCAACGCATCCCGTATCAAGAATGGGGTCTGAAAAGTATCC
CATCCCTCGCAGCAGTGCGGCGACTTGATGAATCCTACGGGACCAAGAAA
GTGGACGTACTTTTCCCAGGAAATGCTATTCGACCGGAAAAGCTTCAAAA
GATGCTGCAAGCAATCGCGACGGAGAGACAGGACCTGCATCGCCGAAGGA
TGTGGTTGAGCTTGCTTGCGACGCCCTTGACCGCTCCCGTTGGTCTTATT
CCTCTGTAAGGAGCCCTCTTGGATTACGTTAATCTCATGGACTTGCTTTA
CCCACATATGCTAATCACATAACCATACTTGGGATATAGTATACCTAATG
TCCCTTTCTTCTATCTCGTATACCGAGCATGGTCCCATGGACGCGGTAGG
ATGATTTCCCCCGGTTCTTTCCTACCCGTGACAGTTCGAGGACTGACTAT
TCCAAGCACTCAACGGCTCCAAACATTTAGAGTTTCTTCTAGAGAAGGAT
ATCCTGAATCCTATATCATACCCTGGGCTTGAAGAACTGTACGCAAAGCG
CGTATCCTACGCACTGGAGAATACGGGGGTGGATAAACCCATTTCGGAGA
TGGTAGAGGACGTTGAGAAGAGCGACGACAGATTACTTCTCCGCATGACA
GATGCGAAGAAACTAGCTTCGATACTCGAGGCGCCGGATCTTGCGTTGGA
AGCTGAGAGAGCCATTATACAGGTGGAGGAAAAGCTGAAGGCGGAAGCGA
AGAAAGATGGTGAGGATGGGGCTTCCGAAAAGAAAGATACATGAGTAATG
GGAATGTGCATGAGATTTGTGACTCCCAGAAGTGGGATTCCTACATGGCA
TCCATCAGGGCCCCCATGGCTGCCCCAGGTCCTCCGAGGTCAAGTCAGTA
CATAGTGTTTGTAAATGGTGCATGGCGAATGGGGCTTGGAAGCACACGCC
CGATTAGAGTGATAGGAAGTATTTAGACGATTTTGCAAAATAATGAAAAG
CACGCGACTCGAGAAGCACTTCATAAATATCAGTTTTGAAGCTATTCACT
GTCTATCTAGATAAC back to topCoding sequence (CDS) from alignment at ch8:3091184..3092748+ >KJC3_012276-T1 ID=KJC3_012276-T1|Name=KJC3_012276-T1|organism=Aspergillus niger KJC3|type=CDS|length=2493bp|location=Sequence derived from alignment at ch8:3091184..3092748+ (Aspergillus niger KJC3)
ATGCGACTCTTCGTCATCCCTATCTCGACGCGACAAGCTCTAATCTACGC
TCGACCCCTCCGCCGTGGTCCGTCGCAGAAGCCTTCGATACATGATCGGG
TCATACAAAAGGCTGCAGAAACGTGGGCGAAATGGGAGGAGGCCGATAAG
GGGTGGAAGAAGCATTTAGTATCCTGGGGTAATCGGGTGCAGCAACGCAT
CCCGTATCAAGAATGGGGTCTGAAAAGTATCCCATCCCTCGCAGCAGTGC
GGCGACTTGATGAATCCTACGGGACCAAGAAAGTGGACGTACTTTTCCCA
GGAAATGCTATTCGACCGGAAAAGCTTCAAAAGATGCTGCAAGCAATCGC
GACGGAGAGACAGGACCTGCATCGCCGAAGGATGTGGTTGAGCTTGCTTG
CGACGCCCTTGACCGCTCCCGTTGGTCTTATTCCTCTTATACCTAATGTC
CCTTTCTTCTATCTCGTATACCGAGCATGGTCCCATGGACGCGCACTCAA
CGGCTCCAAACATTTAGAGTTTCTTCTAGAGAAGGATATCCTGAATCCTA
TATCATACCCTGGGCTTGAAGAACTGTACGCAAAGCGCGTATCCTACGCA
CTGGAGAATACGGGGGTGGATAAACCCATTTCGGAGATGGTAGAGGACGT
TGAGAAGAGCGACGACAGATTACTTCTCCGCATGACAGATGCGAAGAAAC
TAGCTTCGATACTCGAGGCGCCGGATCTTGCGTTGGAAGCTGAGAGAGCC
ATTATACAGGTGGAGGAAAAGCTGAAGGCGGAAGCGAAGAAAGATGGTGA
GGATGGGGCTTCCGAAAAGAAAGATACATGAATGCGACTCTTCGTCATCC
CTATCTCGACGCGACAAGCTCTAATCTACGCTCGACCCCTCCGCCGTGGT
CCGTCGCAGAAGCCTTCGATACATGATCGGGTCATACAAAAGGCTGCAGA
AACGTGGGCGAAATGGGAGGAGGCCGATAAGGGGTGGAAGAAGCATTTAG
TATCCTGGGGTAATCGGGTGCAGCAACGCATCCCGTATCAAGAATGGGGT
CTGAAAAGTATCCCATCCCTCGCAGCAGTGCGGCGACTTGATGAATCCTA
CGGGACCAAGAAAGTGGACGTACTTTTCCCAGGAAATGCTATTCGACCGG
AAAAGCTTCAAAAGATGCTGCAAGCAATCGCGACGGAGAGACAGGACCTG
CATCGCCGAAGGATGTGGTTGAGCTTGCTTGCGACGCCCTTGACCGCTCC
CGTTGGTCTTATTCCTCTTATACCTAATGTCCCTTTCTTCTATCTCGTAT
ACCGAGCATGGTCCCATGGACGCGCACTCAACGGCTCCAAACATTTAGAG
TTTCTTCTAGAGAAGGATATCCTGAATCCTATATCATACCCTGGGCTTGA
AGAACTGTACGCAAAGCGCGTATCCTACGCACTGGAGAATACGGGGGTGG
ATAAACCCATTTCGGAGATGGTAGAGGACGTTGAGAAGAGCGACGACAGA
TTACTTCTCCGCATGACAGATGCGAAGAAACTAGCTTCGATACTCGAGGC
GCCGGATCTTGCGTTGGAAGCTGAGAGAGCCATTATACAGGTGGAGGAAA
AGCTGAAGGCGGAAGCGAAGAAAGATGGTGAGGATGGGGCTTCCGAAAAG
AAAGATACATGAATGCGACTCTTCGTCATCCCTATCTCGACGCGACAAGC
TCTAATCTACGCTCGACCCCTCCGCCGTGGTCCGTCGCAGAAGCCTTCGA
TACATGATCGGGTCATACAAAAGGCTGCAGAAACGTGGGCGAAATGGGAG
GAGGCCGATAAGGGGTGGAAGAAGCATTTAGTATCCTGGGGTAATCGGGT
GCAGCAACGCATCCCGTATCAAGAATGGGGTCTGAAAAGTATCCCATCCC
TCGCAGCAGTGCGGCGACTTGATGAATCCTACGGGACCAAGAAAGTGGAC
GTACTTTTCCCAGGAAATGCTATTCGACCGGAAAAGCTTCAAAAGATGCT
GCAAGCAATCGCGACGGAGAGACAGGACCTGCATCGCCGAAGGATGTGGT
TGAGCTTGCTTGCGACGCCCTTGACCGCTCCCGTTGGTCTTATTCCTCTT
ATACCTAATGTCCCTTTCTTCTATCTCGTATACCGAGCATGGTCCCATGG
ACGCGCACTCAACGGCTCCAAACATTTAGAGTTTCTTCTAGAGAAGGATA
TCCTGAATCCTATATCATACCCTGGGCTTGAAGAACTGTACGCAAAGCGC
GTATCCTACGCACTGGAGAATACGGGGGTGGATAAACCCATTTCGGAGAT
GGTAGAGGACGTTGAGAAGAGCGACGACAGATTACTTCTCCGCATGACAG
ATGCGAAGAAACTAGCTTCGATACTCGAGGCGCCGGATCTTGCGTTGGAA
GCTGAGAGAGCCATTATACAGGTGGAGGAAAAGCTGAAGGCGGAAGCGAA
GAAAGATGGTGAGGATGGGGCTTCCGAAAAGAAAGATACATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012276-T1.utr5p1 | KJC3_012276-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012276-T1.utr3p1 | KJC3_012276-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092653VU |
| DBxref | InterPro:IPR018786 |
| DBxref | PFAM:PF10173 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3091184..3092748 + |
|
