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KJC3_012276-T2, KJC3_012276-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012276-T2
Unique NameKJC3_012276-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3091184..3092748+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012276-T2 ID=KJC3_012276-T2|Name=KJC3_012276-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1565bp|location=Sequence derived from alignment at ch8:3091184..3092748+ (Aspergillus niger KJC3)
AATTAATGGTCCGGCTACCTCCACGCATCCATCTCCCGCTACCTTTATTC
ATTTTCTGATATCAACTCACAGAACGGTAACAACTACTTACCACTCAAAA
AAGCCAATTCAGGCCCCGTGACCTTCGCATATCCTCAACAGACAGGAAAG
GCATGCCACTTTCATATACGCCCTTGAATCGGTTATTTTCTCTAGTCGAT
CGCTAGCTCTCCCTGGCTGCCTCCCAAATTTGCCCAAATCAGCCATTGTC
GCTGATCCTTGGAAACACGCCACGGCATTCATAATAATCACACAAAACGC
ATCCCTTCCTCAGTTGCTATGCGACTCTTCGTCATCCCTATCTCGACGCG
ACAAGCTCTAATCTACGCTCGACCCCTCCGCCGTGGTCCGTCGCAGAAGC
CTTCGATACATGATCGGGTCATACAAAAGGCTGCAGAAACGTGGGCGAAA
TGGGAGGAGGCCGATAAGGGGTGGAAGAAGCATTTAGTATCCTGGGGTAA
TCGGGTGCAGCAACGCATCCCGTATCAAGAATGGGGTCTGAAAAGTATCC
CATCCCTCGCAGCAGTGCGGCGACTTGATGAATCCTACGGGACCAAGAAA
GTGGACGTACTTTTCCCAGGAAATGCTATTCGACCGGAAAAGCTTCAAAA
GATGCTGCAAGCAATCGCGACGGAGAGACAGGACCTGCATCGCCGAAGGA
TGTGGTTGAGCTTGCTTGCGACGCCCTTGACCGCTCCCGTTGGTCTTATT
CCTCTGTAAGGAGCCCTCTTGGATTACGTTAATCTCATGGACTTGCTTTA
CCCACATATGCTAATCACATAACCATACTTGGGATATAGTATACCTAATG
TCCCTTTCTTCTATCTCGTATACCGAGCATGGTCCCATGGACGCGGTAGG
ATGATTTCCCCCGGTTCTTTCCTACCCGTGACAGTTCGAGGACTGACTAT
TCCAAGCACTCAACGGCTCCAAACATTTAGAGTTTCTTCTAGAGAAGGAT
ATCCTGAATCCTATATCATACCCTGGGCTTGAAGAACTGTACGCAAAGCG
CGTATCCTACGCACTGGAGAATACGGGGGTGGATAAACCCATTTCGGAGA
TGGTAGAGGACGTTGAGAAGAGCGACGACAGATTACTTCTCCGCATGACA
GATGCGAAGAAACTAGCTTCGATACTCGAGGCGCCGGATCTTGCGTTGGA
AGCTGAGAGAGCCATTATACAGGTGGAGGAAAAGCTGAAGGCGGAAGCGA
AGAAAGATGGTGAGGATGGGGCTTCCGAAAAGAAAGATACATGAGTAATG
GGAATGTGCATGAGATTTGTGACTCCCAGAAGTGGGATTCCTACATGGCA
TCCATCAGGGCCCCCATGGCTGCCCCAGGTCCTCCGAGGTCAAGTCAGTA
CATAGTGTTTGTAAATGGTGCATGGCGAATGGGGCTTGGAAGCACACGCC
CGATTAGAGTGATAGGAAGTATTTAGACGATTTTGCAAAATAATGAAAAG
CACGCGACTCGAGAAGCACTTCATAAATATCAGTTTTGAAGCTATTCACT
GTCTATCTAGATAAC
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Coding sequence (CDS) from alignment at ch8:3091184..3092748+

>KJC3_012276-T2 ID=KJC3_012276-T2|Name=KJC3_012276-T2|organism=Aspergillus niger KJC3|type=CDS|length=1260bp|location=Sequence derived from alignment at ch8:3091184..3092748+ (Aspergillus niger KJC3)
ATGCGACTCTTCGTCATCCCTATCTCGACGCGACAAGCTCTAATCTACGC
TCGACCCCTCCGCCGTGGTCCGTCGCAGAAGCCTTCGATACATGATCGGG
TCATACAAAAGGCTGCAGAAACGTGGGCGAAATGGGAGGAGGCCGATAAG
GGGTGGAAGAAGCATTTAGTATCCTGGGGTAATCGGGTGCAGCAACGCAT
CCCGTATCAAGAATGGGGTCTGAAAAGTATCCCATCCCTCGCAGCAGTGC
GGCGACTTGATGAATCCTACGGGACCAAGAAAGTGGACGTACTTTTCCCA
GGAAATGCTATTCGACCGGAAAAGCTTCAAAAGATGCTGCAAGCAATCGC
GACGGAGAGACAGGACCTGCATCGCCGAAGGATGTGGTTGAGCTTGCTTG
CGACGCCCTTGACCGCTCCCGTTGGTCTTATTCCTCTTATACCTAATGTC
CCTTTCTTCTATCTCGTATACCGAGCATGGTCCCATGGACGCGGTAGGAT
GATTTCCCCCGGTTCTTTCCTACCCGTGACAGTTCGAGGACTGACTATTC
CAAGCACTCAACGGCTCCAAACATTTAGAGTTTCTTCTAGAGAAGGATAT
CCTGAATCCTATATCATACCCTGGGCTTGAATGCGACTCTTCGTCATCCC
TATCTCGACGCGACAAGCTCTAATCTACGCTCGACCCCTCCGCCGTGGTC
CGTCGCAGAAGCCTTCGATACATGATCGGGTCATACAAAAGGCTGCAGAA
ACGTGGGCGAAATGGGAGGAGGCCGATAAGGGGTGGAAGAAGCATTTAGT
ATCCTGGGGTAATCGGGTGCAGCAACGCATCCCGTATCAAGAATGGGGTC
TGAAAAGTATCCCATCCCTCGCAGCAGTGCGGCGACTTGATGAATCCTAC
GGGACCAAGAAAGTGGACGTACTTTTCCCAGGAAATGCTATTCGACCGGA
AAAGCTTCAAAAGATGCTGCAAGCAATCGCGACGGAGAGACAGGACCTGC
ATCGCCGAAGGATGTGGTTGAGCTTGCTTGCGACGCCCTTGACCGCTCCC
GTTGGTCTTATTCCTCTTATACCTAATGTCCCTTTCTTCTATCTCGTATA
CCGAGCATGGTCCCATGGACGCGGTAGGATGATTTCCCCCGGTTCTTTCC
TACCCGTGACAGTTCGAGGACTGACTATTCCAAGCACTCAACGGCTCCAA
ACATTTAGAGTTTCTTCTAGAGAAGGATATCCTGAATCCTATATCATACC
CTGGGCTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012276KJC3_012276Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012276-T2.utr5p1KJC3_012276-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012276-T2.exon1KJC3_012276-T2.exon1Aspergillus niger KJC3exon
KJC3_012276-T2.exon2KJC3_012276-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012276-T2.cdsKJC3_012276-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012276-T2.utr3p1KJC3_012276-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012276-T2KJC3_012276-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018786
DBxrefPFAM:PF10173
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3091184..3092748 +
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