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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3113606..3115621- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012286-T1 ID=KJC3_012286-T1|Name=KJC3_012286-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2016bp|location=Sequence derived from alignment at ch8:3113606..3115621- (Aspergillus niger KJC3)
CTGGGATTCTTAATGTCATATAAGTAGTAAACCAACATCGACCGATCTTC
TCTGTCATTCTCCTCTTTTTACAGATAAATTGCCCTCCCCAACCACTGCG
ACCTTCCCTTTTCAGTGGCGGATCCGCCAAGACATTTCCCAACTGGCCAC
ATCGTATCACGTGCGCGTGTCGCTAGATGCCTTGTTTTCCGTCCTGAAAA
ATTTGGCAATCCGTCCTTCCGAACTGAGCAAACAACCATCCATCGCCCAG
TGCCACCCGACGCGCATTGAGCTCGACGATCAAGCTAATATCAACTCCCT
TTCCCTCCCATCTCCTCACCTGCTGCACTTGACCTTTCTTCATCTTTACC
ACCGCCTACCTATCTTCTATTTTCCGCCTCGTTTTCCGAACGCCACCAGG
GCCAACCCCCTTCGCAATTGACGGCGGGGTTGTAGCTGCGCTATGGGTGA
CGGCTCTGATTATCCTAGTCCACGAAGTGAAGGTCCCGGTGGACCTACCT
CTGTTCTCGTCACTGTTCAAGACTCGCTTTCTCCAGCTCCCAAGATGAAC
GACCAACTGTCTCCGAACTTCATGGAAGGGACGCGCCCGCGACTGTCGGT
GAGAAGAGCGCGGGATCCGCCCAAGAACACTGCCGGTCAAATCTACTGCG
ACCATCCCGAGTGCCAGCACTCGCCCCCAACATTTCGCCGTCCGTGCGAA
TGGAAGTAAGTTCACCCTCATTGTGATTTAAAAAAAGTTCTAGAAAAAAG
AAGAAAAAAAAGACAAATCTACAAAATCCCCGAATCAAGGAAAAGCTAAC
GGTTTGCCACTTCAGCAAACACATGGACAAACACGACCGCCCGTACAAGT
GCATGGAACCCGGCTGCGACAAGATTCAAGGTTTTACATACTCTGGCGGT
CTGCTGAGGCATCAGCGCGAGGTGCATAAGAAGAACATCAATGCCAAGAA
ACCCTTGATGTGTCCGTACGCCGACTGCAATCGCAGCACAGGGAACGGAT
TTACGCGTCAGGAAAACTTGAAGGAGCACCTTCGCCGCCGCCACATGCAC
ACTGAGAACGGACATGCGTCCGAGCTGCCCATCGCCCCGTCGCCCGATCT
GGATGGCACCACGTCTCTTGCGACGGCATCCGCAGCCTTGAAGAGGAAGC
GCGAATCTCTCGGAGATGATCCGGCCACTCTCGAGCTTCCTGAGGAGGAA
GAGAATGGGGTGGATCTTCGCAATGAATTGAAGAGGCTGCGTCGTGAGGT
CCAGGAAAAGGACCGCCGACTGGAGGAGTTGGAACGCATCGTGGCTGGAC
TACAGCAGGCGATTCCTCAGACCGCGACGTCACAGGGCTAGCTGGATGCG
CAGGATCAAGTTTTCGACGAGTGGTATTGATTCATCGCTCTTTCACTTTC
TTATCATTTGTAGCTTTTCCCTGTTTCGTGCTACTTTGGCTCTCCCCTTT
CGCTTTGCCTACCTCCCCCTTCTCTTTTTTTCTTCTCTGGTTCAGAGTCA
GTTCACTTCATTCTCATGGTTTGCTGTATGAAATTTGCATTCAAAGGGCG
TTCAAATTATGCAAATTATGGGCCATGGTTGATTTCGCGAAATTTGTCTA
CAACATCTACGGGTGGTTCATATGGGTCGGTCTACATCTCGGAACGCATG
GATAAGATCAGGCAGCTCTGAAGATGATGGCGTTTGCTCGAGGTCGTTGA
TACAGACCAGGTGGTGTTTTTTCATTCTGATTTATCCTTGTGATTCTTAC
CCTTTGTCTCTTTCCCTATATCATTTCCTCCATCTCCTTCTTACTTATTA
TTCCCTGAAATATACCCAGGCGTTTTCACCCCGTTTCTTTTGTTGCCTCT
GACCTTTCCATAATCTTGTCTCTTCAGTTGTGCCTTAAATCCTCCGATGC
AAACGTAGCTGTCGATCCTGGGATGCGTAGTCCCTCCACCACGTCAGTGG
GGTGAAATCATAAAATACGGCTCTCATCTATCTACCTGCCTGTCTTGACG
GCAAGCTGGATGCCGC back to topCoding sequence (CDS) from alignment at ch8:3113606..3115621- >KJC3_012286-T1 ID=KJC3_012286-T1|Name=KJC3_012286-T1|organism=Aspergillus niger KJC3|type=CDS|length=1578bp|location=Sequence derived from alignment at ch8:3113606..3115621- (Aspergillus niger KJC3)
CAAACACATGGACAAACACGACCGCCCGTACAAGTGCATGGAACCCGGCT
GCGACAAGATTCAAGGTTTTACATACTCTGGCGGTCTGCTGAGGCATCAG
CGCGAGGTGCATAAGAAGAACATCAATGCCAAGAAACCCTTGATGTGTCC
GTACGCCGACTGCAATCGCAGCACAGGGAACGGATTTACGCGTCAGGAAA
ACTTGAAGGAGCACCTTCGCCGCCGCCACATGCACACTGAGAACGGACAT
GCGTCCGAGCTGCCCATCGCCCCGTCGCCCGATCTGGATGGCACCACGTC
TCTTGCGACGGCATCCGCAGCCTTGAAGAGGAAGCGCGAATCTCTCGGAG
ATGATCCGGCCACTCTCGAGCTTCCTGAGGAGGAAGAGAATGGGGTGGAT
CTTCGCAATGAATTGAAGAGGCTGCGTCGTGAGGTCCAGGAAAAGGACCG
CCGACTGGAGGAGTTGGAACGCATCGTGGCTGGACTACAGCAGGCGATTC
CTCAGACCGCGACGTCACAGGGCTAGATGGGTGACGGCTCTGATTATCCT
AGTCCACGAAGTGAAGGTCCCGGTGGACCTACCTCTGTTCTCGTCACTGT
TCAAGACTCGCTTTCTCCAGCTCCCAAGATGAACGACCAACTGTCTCCGA
ACTTCATGGAAGGGACGCGCCCGCGACTGTCGGTGAGAAGAGCGCGGGAT
CCGCCCAAGAACACTGCCGGTCAAATCTACTGCGACCATCCCGAGTGCCA
GCACTCGCCCCCAACATTTCGCCGTCCGTGCGAATGGAACAAACACATGG
ACAAACACGACCGCCCGTACAAGTGCATGGAACCCGGCTGCGACAAGATT
CAAGGTTTTACATACTCTGGCGGTCTGCTGAGGCATCAGCGCGAGGTGCA
TAAGAAGAACATCAATGCCAAGAAACCCTTGATGTGTCCGTACGCCGACT
GCAATCGCAGCACAGGGAACGGATTTACGCGTCAGGAAAACTTGAAGGAG
CACCTTCGCCGCCGCCACATGCACACTGAGAACGGACATGCGTCCGAGCT
GCCCATCGCCCCGTCGCCCGATCTGGATGGCACCACGTCTCTTGCGACGG
CATCCGCAGCCTTGAAGAGGAAGCGCGAATCTCTCGGAGATGATCCGGCC
ACTCTCGAGCTTCCTGAGGAGGAAGAGAATGGGGTGGATCTTCGCAATGA
ATTGAAGAGGCTGCGTCGTGAGGTCCAGGAAAAGGACCGCCGACTGGAGG
AGTTGGAACGCATCGTGGCTGGACTACAGCAGGCGATTCCTCAGACCGCG
ACGTCACAGGGCTAGATGGGTGACGGCTCTGATTATCCTAGTCCACGAAG
TGAAGGTCCCGGTGGACCTACCTCTGTTCTCGTCACTGTTCAAGACTCGC
TTTCTCCAGCTCCCAAGATGAACGACCAACTGTCTCCGAACTTCATGGAA
GGGACGCGCCCGCGACTGTCGGTGAGAAGAGCGCGGGATCCGCCCAAGAA
CACTGCCGGTCAAATCTACTGCGACCATCCCGAGTGCCAGCACTCGCCCC
CAACATTTCGCCGTCCGTGCGAATGGAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012286-T1.utr3p1 | KJC3_012286-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012286-T1.utr5p1 | KJC3_012286-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR031514 |
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3113606..3115621 - |
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