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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3149121..3150170+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012296-T1 ID=KJC3_012296-T1|Name=KJC3_012296-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1050bp|location=Sequence derived from alignment at ch8:3149121..3150170+ (Aspergillus niger KJC3)
ATGCATGAGCATGAAATGTCCTACATGGGCCCTCGGGGTATGATCCCTTC
CTACCTTCATAGCCACAATCTCCCATAAACTAACGGCACCGATACCGAAG
CCTTCAGTCACGATCAGAGCCAAGATGCAGAGGCTGAATATGACCGACTC
CGCAACCTAGCCCGACAAGAAGCTTCAAAGCGCAACTCATGTTTCCAACG
GGTACGCCATTAACAACCACTGTCGCAACCACCCAACCGCTCGCCAAATT
AGAGAAAGAAACAAACAACTAACCAATATTTAATGGTCAGTCTCAAGAAG
CCTACTCCAGCGGCGATGGCGCCAAGGCCAAAGAACTCTCGGAACAAGGC
AAAGCCCACGGTCGCAAGATGGAAGAATACAACAAGCAAGCGTCGGAGTT
CATCTTCCGCGAGAACAACGCCAACGGGCGTGTTGCGGCAGACACCATCG
ATCTGCACGGACAATTCGTCGAAGAGGCTGAGGAGATTCTCGAGGAGAGG
ATTAAATATGCGAAAGCGCACGGTCAGGATCATCTCCATGTGTAAGCTTC
CCTTTCACGTTACTCTCACACACACTGGCTTCTTCTTTACCCTCGACACT
GATCGCTAATTGTTACAATTTTCCCCAATCAATAGAATTGTCGGCAAGGG
CAACCACTCCGCCAATCATATCCAGAAAATCAAGCCCCGAGTAGAGCAAG
TCTGCCAGGAACTCGGTCTCCAGTACGCGACTGAGGAGAACGCAGGGCGC
ATTTATGTGAATCTGACTGGTGGACCGGCGGATATGGAGACTGCGCCAAC
GCCCAATCATCCTCACTATCAGCAATACCCTCAGCATCAACAGCATCCGT
CGGGTACCTATGCTCACCCGCATCAGCAGCAGCAGCAGCAATATCCCGGT
TCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAACA
ACAGGGTGCGGGCAACCAGGATGAGATCGAGCAGGTGGTTAATGCGGTTC
TGCCTAAGATTCTCAATAAGCTGGAGAAGGCTTGCTGTGTGGTCATGTGA
back to topCoding sequence (CDS) from alignment at ch8:3149121..3150170+ >KJC3_012296-T1 ID=KJC3_012296-T1|Name=KJC3_012296-T1|organism=Aspergillus niger KJC3|type=CDS|length=3216bp|location=Sequence derived from alignment at ch8:3149121..3150170+ (Aspergillus niger KJC3)
ATGCATGAGCATGAAATGTCCTACATGGGCCCTCGGGCCTTCAGTCACGA
TCAGAGCCAAGATGCAGAGGCTGAATATGACCGACTCCGCAACCTAGCCC
GACAAGAAGCTTCAAAGCGCAACTCATGTTTCCAACGGTCTCAAGAAGCC
TACTCCAGCGGCGATGGCGCCAAGGCCAAAGAACTCTCGGAACAAGGCAA
AGCCCACGGTCGCAAGATGGAAGAATACAACAAGCAAGCGTCGGAGTTCA
TCTTCCGCGAGAACAACGCCAACGGGCGTGTTGCGGCAGACACCATCGAT
CTGCACGGACAATTCGTCGAAGAGGCTGAGGAGATTCTCGAGGAGAGGAT
TAAATATGCGAAAGCGCACGGTCAGGATCATCTCCATGTAATTGTCGGCA
AGGGCAACCACTCCGCCAATCATATCCAGAAAATCAAGCCCCGAGTAGAG
CAAGTCTGCCAGGAACTCGGTCTCCAGTACGCGACTGAGGAGAACGCAGG
GCGCATTTATGTGAATCTGACTGGTGGACCGGCGGATATGGAGACTGCGC
CAACGCCCAATCATCCTCACTATCAGCAATACCCTCAGCATCAACAGCAT
CCGTCGGGTACCTATGCTCACCCGCATCAGCAGCAGCAGCAGCAATATCC
CGGTTCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGC
AACAACAGGGTGCGGGCAACCAGGATGAGATCGAGCAGGTGGTTAATGCG
GTTCTGCCTAAGATTCTCAATAAGCTGGAGAAGGCTTGCTGTGTGGTCAT
GTGAATGCATGAGCATGAAATGTCCTACATGGGCCCTCGGGCCTTCAGTC
ACGATCAGAGCCAAGATGCAGAGGCTGAATATGACCGACTCCGCAACCTA
GCCCGACAAGAAGCTTCAAAGCGCAACTCATGTTTCCAACGGTCTCAAGA
AGCCTACTCCAGCGGCGATGGCGCCAAGGCCAAAGAACTCTCGGAACAAG
GCAAAGCCCACGGTCGCAAGATGGAAGAATACAACAAGCAAGCGTCGGAG
TTCATCTTCCGCGAGAACAACGCCAACGGGCGTGTTGCGGCAGACACCAT
CGATCTGCACGGACAATTCGTCGAAGAGGCTGAGGAGATTCTCGAGGAGA
GGATTAAATATGCGAAAGCGCACGGTCAGGATCATCTCCATGTAATTGTC
GGCAAGGGCAACCACTCCGCCAATCATATCCAGAAAATCAAGCCCCGAGT
AGAGCAAGTCTGCCAGGAACTCGGTCTCCAGTACGCGACTGAGGAGAACG
CAGGGCGCATTTATGTGAATCTGACTGGTGGACCGGCGGATATGGAGACT
GCGCCAACGCCCAATCATCCTCACTATCAGCAATACCCTCAGCATCAACA
GCATCCGTCGGGTACCTATGCTCACCCGCATCAGCAGCAGCAGCAGCAAT
ATCCCGGTTCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAG
CAGCAACAACAGGGTGCGGGCAACCAGGATGAGATCGAGCAGGTGGTTAA
TGCGGTTCTGCCTAAGATTCTCAATAAGCTGGAGAAGGCTTGCTGTGTGG
TCATGTGAATGCATGAGCATGAAATGTCCTACATGGGCCCTCGGGCCTTC
AGTCACGATCAGAGCCAAGATGCAGAGGCTGAATATGACCGACTCCGCAA
CCTAGCCCGACAAGAAGCTTCAAAGCGCAACTCATGTTTCCAACGGTCTC
AAGAAGCCTACTCCAGCGGCGATGGCGCCAAGGCCAAAGAACTCTCGGAA
CAAGGCAAAGCCCACGGTCGCAAGATGGAAGAATACAACAAGCAAGCGTC
GGAGTTCATCTTCCGCGAGAACAACGCCAACGGGCGTGTTGCGGCAGACA
CCATCGATCTGCACGGACAATTCGTCGAAGAGGCTGAGGAGATTCTCGAG
GAGAGGATTAAATATGCGAAAGCGCACGGTCAGGATCATCTCCATGTAAT
TGTCGGCAAGGGCAACCACTCCGCCAATCATATCCAGAAAATCAAGCCCC
GAGTAGAGCAAGTCTGCCAGGAACTCGGTCTCCAGTACGCGACTGAGGAG
AACGCAGGGCGCATTTATGTGAATCTGACTGGTGGACCGGCGGATATGGA
GACTGCGCCAACGCCCAATCATCCTCACTATCAGCAATACCCTCAGCATC
AACAGCATCCGTCGGGTACCTATGCTCACCCGCATCAGCAGCAGCAGCAG
CAATATCCCGGTTCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCA
GCAGCAGCAACAACAGGGTGCGGGCAACCAGGATGAGATCGAGCAGGTGG
TTAATGCGGTTCTGCCTAAGATTCTCAATAAGCTGGAGAAGGCTTGCTGT
GTGGTCATGTGAATGCATGAGCATGAAATGTCCTACATGGGCCCTCGGGC
CTTCAGTCACGATCAGAGCCAAGATGCAGAGGCTGAATATGACCGACTCC
GCAACCTAGCCCGACAAGAAGCTTCAAAGCGCAACTCATGTTTCCAACGG
TCTCAAGAAGCCTACTCCAGCGGCGATGGCGCCAAGGCCAAAGAACTCTC
GGAACAAGGCAAAGCCCACGGTCGCAAGATGGAAGAATACAACAAGCAAG
CGTCGGAGTTCATCTTCCGCGAGAACAACGCCAACGGGCGTGTTGCGGCA
GACACCATCGATCTGCACGGACAATTCGTCGAAGAGGCTGAGGAGATTCT
CGAGGAGAGGATTAAATATGCGAAAGCGCACGGTCAGGATCATCTCCATG
TAATTGTCGGCAAGGGCAACCACTCCGCCAATCATATCCAGAAAATCAAG
CCCCGAGTAGAGCAAGTCTGCCAGGAACTCGGTCTCCAGTACGCGACTGA
GGAGAACGCAGGGCGCATTTATGTGAATCTGACTGGTGGACCGGCGGATA
TGGAGACTGCGCCAACGCCCAATCATCCTCACTATCAGCAATACCCTCAG
CATCAACAGCATCCGTCGGGTACCTATGCTCACCCGCATCAGCAGCAGCA
GCAGCAATATCCCGGTTCGCAACAGCAGCAGCAACAGCAGCAGCAGCAAC
AGCAGCAGCAGCAACAACAGGGTGCGGGCAACCAGGATGAGATCGAGCAG
GTGGTTAATGCGGTTCTGCCTAAGATTCTCAATAAGCTGGAGAAGGCTTG
CTGTGTGGTCATGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.7 |
| DBxref | InterPro:IPR036063 |
| DBxref | InterPro:IPR002625 |
| DBxref | InterPro:IPR013899 |
| DBxref | PFAM:PF01713 |
| DBxref | PFAM:PF08590 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3149121..3150170 + |
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