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KJC3_012310-T1, KJC3_012310-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012310-T1
Unique NameKJC3_012310-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3198924..3201504+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012310-T1 ID=KJC3_012310-T1|Name=KJC3_012310-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2581bp|location=Sequence derived from alignment at ch8:3198924..3201504+ (Aspergillus niger KJC3)
ACTATACACCCCAAACCCATTCATTCTCTTTCATTCATTCTTCCTTAATC
TCTCCTTTTAACCGTCGCAATGGATCCTTTTTCTGCAGAGGGTGGTATGT
TTTGTCCATTGAGCAAACACACACATACAATCCCCCCTTATGACCTCAAA
GCGCTAACTTGCCTCATCCCCCCAATAACAGAGCTAATCAACATCCACAA
TGCCTTTCACCAAGGCCAATACCAAGCCGTAATCGAATTCGACACCTCCG
CTCTATCCCCCGAGAACCAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCC
AAGATCGCCCTAGGCCAATCAGATGAAGTTCTCGCCGATGTCGAAGGCGA
GGAAGAGACCCCCGATCTAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGA
CTGGAGATGCCGAATCGGCGTTGAAGCTGGCTCAGGACCTTGCGGAGAAT
TACCCCGACAATGCTACTGTACAGGTTCTGTGCGGGACGTTGCTGCAGGC
TCAGGGACAAAGTGAGGATGCGTTGGCTTTATTGACCAAGCATCAGGGGA
ACCTCGAGGCGTGAGTTTTAGCCGTCAATTTGCCATGTGCACTGTCTGTA
TAATGGGTGGAACTCAGGAAGCTAATGGACAATGATATAGTGTGGCCTTG
ATCGTCCAGATTCATCTTCAGCAGAACCGCTCTGATCTCGCCTTGAAGGA
AGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCCCTCTTGGTTAACTTGG
CTGAGTCGTGGGTGGGAATGAGAGTGGTATGTGTCACACCCTGCTGCAGC
CTCCTTGCTGTTTGTTCGAGGGTAAGCGATGAAACTAATATGCTGTTGCT
TCGGCTTTTAGGGCGGCGAGAAATACCAGGCTGCATTCTACGTCTACGAG
GAATTGGCTTCCGCTCCTAGCAGCTCCGCGCCCCTCTCTATCGTTGGTCA
GGCCGTGGCAGAACTCCATCTCGGTCGGTTGCCTGAGGCCGAGGCCGCCT
TGACTGCAGCTCTGCAGCAGTATCCCGACGAGGCGGAACTGATTGCGAAC
ACTGTTGTGCTGAACGTCTTGGCTGGCAAGCCCTCGGAAGAGTTGGAGCA
GTACGTTCACCCTCCTACCCCTAAACCCATCGATCTGCGGACGAATGTGT
AGCTAACGCATGCATTGCACTTACTATAGGCGCCTCGAACAGATCAACCC
CGCGCACCCCCTGCTCTCCGATCTTCAAGCAAAGAGTGAACTGTTCGATA
CCGCGGCTGCGAAGTATGCTCCCAGAGTGTCGGCTTAATCTAGGATATCC
GTTGTTTACTTTTGTGCTGCTTGCATTGTTTTTGTCTCCTGATCTCCATC
TTGTACCCCTCTTCTTGCTCCCTGGGCGTGATATTGTTTCCGATTATGAA
TTGATACGACGGCGTAGCTATGTGTAAGCTAGTTATTGTCCAGCGAATGC
TTCCTGCCTTATCCTATTTTGCCCCGTCTAGTCTGCACTTGCCCGTTTTC
TGTGTATAACGAGGGACCAAGAATCTACCAGTATCAGCAGACAGGCTGAT
AGATTATATTAGTTGTACGTTATTTGGTGTACCTTCCCCAATTTGGGCCA
GGGATTACAGACTTGTTACCTGAACCTTCACAGGAAAAGCGACCGAAAGC
CAGAGAACATGGCTAGCAACGGGACCCTTCAGTCTGCATTGTACAATAAA
TGTGTAGTTGTCACCTACTCGACAGCTGACACTACTAATCAATCTCACAG
CCGAGCACCTAACCAATTAATGATTGCCTGGGTCTGCTGAGTATCATAGC
CAACTATATCTGCAGCGAAGACAGCCGAGTCATGGGTTTCGTCTTGTGCC
ACAACATAAACAGTATTGGGTACGACTTTCTGTTTATAGTGGCAAAAGGT
CAGTTTGTGCAATGTAACTAGGGGTAAAATACCAGCAAGATGCAGTCAAC
CAAGAGAGGGGGGAAGGTGGAGGGGTACGAGAAGTGACGAACGAACCTTG
AATCTCTCCACAAACTCATTGATTGGAGAGAGTAAAATCTCATCTCTCCC
GGCAGTCATTAGGAAATCTTCTGCTTTTAATCCCTCCCACCAATCCATGG
GAGCTCGAGCTGGCTCACTCCAAGGGTCACCTTCCTTACCCGCCAGGTAC
TGATTAGACCAACGGTCGAGAATCTCCTTAGAGAGGGCATCCTTGTAAGC
GTTTTCCCGGAAACTATGGCCGTCCATCTTGTAACTGATCCACGGTGCGC
AGCCAAATACACCTGCCAAGGGTTGGGAGATACTGAGAGGCTCGATCTCA
GGGTGTGGATGGGTGAGGTGCAAAAGCACAGCTAGAGAGAGGTTTCCACC
AGCGGAATCACCACCCAGGAAGATGTTGGCTGGGGAGCGGCCTGTCTCGG
TGAGGATGTAGCGGAGGGCTTCAACAGACTGGCGAAGTTGAACGGGATAA
ACAGCGTGCGGCATAAGAGAGTAGCTGAGAAAGAAGATAGCAAGATCGTC
ATGGCCAGCTTCGTTCAGGCGGTTAAGTATATGTGCTAGTAGCTGGTAAT
GATGGGGACGACCAAACAGAAAGAATCCGCC
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Coding sequence (CDS) from alignment at ch8:3198924..3201504+

>KJC3_012310-T1 ID=KJC3_012310-T1|Name=KJC3_012310-T1|organism=Aspergillus niger KJC3|type=CDS|length=4440bp|location=Sequence derived from alignment at ch8:3198924..3201504+ (Aspergillus niger KJC3)
ATGGATCCTTTTTCTGCAGAGGGTGAGCTAATCAACATCCACAATGCCTT
TCACCAAGGCCAATACCAAGCCGTAATCGAATTCGACACCTCCGCTCTAT
CCCCCGAGAACCAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATC
GCCCTAGGCCAATCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGA
GACCCCCGATCTAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAG
ATGCCGAATCGGCGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCC
GACAATGCTACTGTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGG
ACAAAGTGAGGATGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCG
AGGCTGTGGCCTTGATCGTCCAGATTCATCTTCAGCAGAACCGCTCTGAT
CTCGCCTTGAAGGAAGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCCCT
CTTGGTTAACTTGGCTGAGTCGTGGGTGGGAATGAGAGTGGGCGGCGAGA
AATACCAGGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTAGC
AGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCATCT
CGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCAGT
ATCCCGACGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAACGTCTTG
GCTGGCAAGCCCTCGGAAGAGTTGGAGCAGCGCCTCGAACAGATCAACCC
CGCGCACCCCCTGCTCTCCGATCTTCAAGCAAAGAGTGAACTGTTCGATA
CCGCGGCTGCGAAGTATGCTCCCAGAGTGTCGGCTTAAATGGATCCTTTT
TCTGCAGAGGGTGAGCTAATCAACATCCACAATGCCTTTCACCAAGGCCA
ATACCAAGCCGTAATCGAATTCGACACCTCCGCTCTATCCCCCGAGAACC
AACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGATCGCCCTAGGCCAA
TCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAAGAGACCCCCGATCT
AGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGGAGATGCCGAATCGG
CGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACCCCGACAATGCTACT
GTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAGGGACAAAGTGAGGA
TGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCTCGAGGCTGTGGCCT
TGATCGTCCAGATTCATCTTCAGCAGAACCGCTCTGATCTCGCCTTGAAG
GAAGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCCCTCTTGGTTAACTT
GGCTGAGTCGTGGGTGGGAATGAGAGTGGGCGGCGAGAAATACCAGGCTG
CATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTAGCAGCTCCGCGCCC
CTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCATCTCGGTCGGTTGCC
TGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCAGTATCCCGACGAGG
CGGAACTGATTGCGAACACTGTTGTGCTGAACGTCTTGGCTGGCAAGCCC
TCGGAAGAGTTGGAGCAGCGCCTCGAACAGATCAACCCCGCGCACCCCCT
GCTCTCCGATCTTCAAGCAAAGAGTGAACTGTTCGATACCGCGGCTGCGA
AGTATGCTCCCAGAGTGTCGGCTTAAATGGATCCTTTTTCTGCAGAGGGT
GAGCTAATCAACATCCACAATGCCTTTCACCAAGGCCAATACCAAGCCGT
AATCGAATTCGACACCTCCGCTCTATCCCCCGAGAACCAACTCCCTGCCC
GTGTCCTCCAGCTTCGCGCCAAGATCGCCCTAGGCCAATCAGATGAAGTT
CTCGCCGATGTCGAAGGCGAGGAAGAGACCCCCGATCTAGCGGCCGTGAA
AGCGCTGGCCCAGCAGTCGACTGGAGATGCCGAATCGGCGTTGAAGCTGG
CTCAGGACCTTGCGGAGAATTACCCCGACAATGCTACTGTACAGGTTCTG
TGCGGGACGTTGCTGCAGGCTCAGGGACAAAGTGAGGATGCGTTGGCTTT
ATTGACCAAGCATCAGGGGAACCTCGAGGCTGTGGCCTTGATCGTCCAGA
TTCATCTTCAGCAGAACCGCTCTGATCTCGCCTTGAAGGAAGTCCAGGCT
GCAAAGCGCTGGGCGCAGGATTCCCTCTTGGTTAACTTGGCTGAGTCGTG
GGTGGGAATGAGAGTGGGCGGCGAGAAATACCAGGCTGCATTCTACGTCT
ACGAGGAATTGGCTTCCGCTCCTAGCAGCTCCGCGCCCCTCTCTATCGTT
GGTCAGGCCGTGGCAGAACTCCATCTCGGTCGGTTGCCTGAGGCCGAGGC
CGCCTTGACTGCAGCTCTGCAGCAGTATCCCGACGAGGCGGAACTGATTG
CGAACACTGTTGTGCTGAACGTCTTGGCTGGCAAGCCCTCGGAAGAGTTG
GAGCAGCGCCTCGAACAGATCAACCCCGCGCACCCCCTGCTCTCCGATCT
TCAAGCAAAGAGTGAACTGTTCGATACCGCGGCTGCGAAGTATGCTCCCA
GAGTGTCGGCTTAAATGGATCCTTTTTCTGCAGAGGGTGAGCTAATCAAC
ATCCACAATGCCTTTCACCAAGGCCAATACCAAGCCGTAATCGAATTCGA
CACCTCCGCTCTATCCCCCGAGAACCAACTCCCTGCCCGTGTCCTCCAGC
TTCGCGCCAAGATCGCCCTAGGCCAATCAGATGAAGTTCTCGCCGATGTC
GAAGGCGAGGAAGAGACCCCCGATCTAGCGGCCGTGAAAGCGCTGGCCCA
GCAGTCGACTGGAGATGCCGAATCGGCGTTGAAGCTGGCTCAGGACCTTG
CGGAGAATTACCCCGACAATGCTACTGTACAGGTTCTGTGCGGGACGTTG
CTGCAGGCTCAGGGACAAAGTGAGGATGCGTTGGCTTTATTGACCAAGCA
TCAGGGGAACCTCGAGGCTGTGGCCTTGATCGTCCAGATTCATCTTCAGC
AGAACCGCTCTGATCTCGCCTTGAAGGAAGTCCAGGCTGCAAAGCGCTGG
GCGCAGGATTCCCTCTTGGTTAACTTGGCTGAGTCGTGGGTGGGAATGAG
AGTGGGCGGCGAGAAATACCAGGCTGCATTCTACGTCTACGAGGAATTGG
CTTCCGCTCCTAGCAGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTG
GCAGAACTCCATCTCGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGC
AGCTCTGCAGCAGTATCCCGACGAGGCGGAACTGATTGCGAACACTGTTG
TGCTGAACGTCTTGGCTGGCAAGCCCTCGGAAGAGTTGGAGCAGCGCCTC
GAACAGATCAACCCCGCGCACCCCCTGCTCTCCGATCTTCAAGCAAAGAG
TGAACTGTTCGATACCGCGGCTGCGAAGTATGCTCCCAGAGTGTCGGCTT
AAATGGATCCTTTTTCTGCAGAGGGTGAGCTAATCAACATCCACAATGCC
TTTCACCAAGGCCAATACCAAGCCGTAATCGAATTCGACACCTCCGCTCT
ATCCCCCGAGAACCAACTCCCTGCCCGTGTCCTCCAGCTTCGCGCCAAGA
TCGCCCTAGGCCAATCAGATGAAGTTCTCGCCGATGTCGAAGGCGAGGAA
GAGACCCCCGATCTAGCGGCCGTGAAAGCGCTGGCCCAGCAGTCGACTGG
AGATGCCGAATCGGCGTTGAAGCTGGCTCAGGACCTTGCGGAGAATTACC
CCGACAATGCTACTGTACAGGTTCTGTGCGGGACGTTGCTGCAGGCTCAG
GGACAAAGTGAGGATGCGTTGGCTTTATTGACCAAGCATCAGGGGAACCT
CGAGGCTGTGGCCTTGATCGTCCAGATTCATCTTCAGCAGAACCGCTCTG
ATCTCGCCTTGAAGGAAGTCCAGGCTGCAAAGCGCTGGGCGCAGGATTCC
CTCTTGGTTAACTTGGCTGAGTCGTGGGTGGGAATGAGAGTGGGCGGCGA
GAAATACCAGGCTGCATTCTACGTCTACGAGGAATTGGCTTCCGCTCCTA
GCAGCTCCGCGCCCCTCTCTATCGTTGGTCAGGCCGTGGCAGAACTCCAT
CTCGGTCGGTTGCCTGAGGCCGAGGCCGCCTTGACTGCAGCTCTGCAGCA
GTATCCCGACGAGGCGGAACTGATTGCGAACACTGTTGTGCTGAACGTCT
TGGCTGGCAAGCCCTCGGAAGAGTTGGAGCAGCGCCTCGAACAGATCAAC
CCCGCGCACCCCCTGCTCTCCGATCTTCAAGCAAAGAGTGAACTGTTCGA
TACCGCGGCTGCGAAGTATGCTCCCAGAGTGTCGGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012310KJC3_012310Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012310-T1KJC3_012310-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012310-T1.utr5p1KJC3_012310-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012310-T1.exon1KJC3_012310-T1.exon1Aspergillus niger KJC3exon
KJC3_012310-T1.exon2KJC3_012310-T1.exon2Aspergillus niger KJC3exon
KJC3_012310-T1.exon3KJC3_012310-T1.exon3Aspergillus niger KJC3exon
KJC3_012310-T1.exon4KJC3_012310-T1.exon4Aspergillus niger KJC3exon
KJC3_012310-T1.exon5KJC3_012310-T1.exon5Aspergillus niger KJC3exon
KJC3_012310-T1.exon6KJC3_012310-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012310-T1.cdsKJC3_012310-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012310-T1.utr3p1KJC3_012310-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_012310-T1.utr3p2KJC3_012310-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR006822
DBxrefPFAM:PF13174
DBxrefPFAM:PF13432
DBxrefPFAM:PF04733
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3198924..3201504 +
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