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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3213756..3215972+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012317-T1 ID=KJC3_012317-T1|Name=KJC3_012317-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2217bp|location=Sequence derived from alignment at ch8:3213756..3215972+ (Aspergillus niger KJC3) CTTACTCCGTAGTTACTACTTTACTACTAACTGCTTCCCAACCCCGTCCA
GCCTACCGCTCTCTGGACGTCATCTCCCATGCTCCTTTTGTTTTTACCCC
TCCGGAATTGATTAATCTCTTGCAAACTCTCTCAATCTACATCCCTTCAC
CATGGCTGACATGCCCATTGGTATGTTTATGCGTGTTCCCCCTCCTCTTC
CTTACCTTCATCTTCCCTTACCCCCTCCCCGAGTTCTCCTTGTCGGTGCC
TGTCCCTCCCGTGCTTCCCAGCTAACCAACCACGCCCCCCAGTGCTCGAC
GGAGGAACTGGTTTCCTCAAGGTCGGATATGCTGCGCAGGTCTGTCATCA
CCTCCCATCCCATTGCGTACTCTTACTTACCTCCTCTTCTTCCCCATGGA
TAGAACTTCCCCGAGCACCAGTTCCCCTCGATAGTGGGGCGGCCCATATT
GCGAACGGAGGAGCAGGCCGGCGACATTGTCGTCAAGGATATCATGTGCG
GAGATGAAGCTGCTGCTGCCAGATCTATGCTGCAAATCACCTACCCTGTA
CGTCATTTACATTCGCGTGCCTTCGTTCTCCCCCCACCCCCGATCGCTCC
ATTGTCTCCCCGGAGGTGTGGCAGACGTGTTAACGTTGGGCCCGACTTGG
TATACAGATGGAGAATGGTATCGTGAAGAGATGGGACGACATGCAACACC
TATGGAACTACACCTTTTACGAGAAGATGAAGATCGATCCTACGGGCCGC
AAGATCCTCTTGACCGAACCCCCCATGAATCCCCTGAAGAACCGGGAGCA
AATGGCTGAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGTATACGTTG
CTATTCAAGCTGTGCTTGCACTATACGCTCAGGGTAAGTCTTGCACGCTT
CATATCCTCTCTCTTATCCCGCAGCTCTGATCGCCCGCTCTTTCGCAATC
CACAGGTCTCAGCAGTGGTGTGGTCGTTGACTCCGGTGACGGTGTCACCC
ACATTATCCCCGTCTACGAATCCACAGTTCTTAACCACCACATTCGCCGG
CTTGATGTCGCCGGTCGTGATGTCACCCGTAACCTCATCGCCCTCCTGCT
CCGTCGCGGTTATGCCTTGAACCGTACCGCCGATTTCGAAACCGTGCGCC
AGATCAAGGAGAAGCTCTGCTATGTGTCCTACGATCTCGAGTTGGACAAG
AAGCTCTCCGAAGACACAACCGTCCTTGTCGAGTCCTACACCCTTCCCGA
TGGTCGCGTCATCCGCGTCGGCAGCGAGCGCTTTGAAGCCCCCGAATGCC
TCTTCCAGCCGCACCTGGTGGATGTTGATCAGCCCGGTATCGCCGAGTTG
CTCTTCAACACCATCCAGGGCGCCGATGTCGATGTGCGCTCCAGTCTCTA
CAAGGCTATTGTGCTCAGTGGAGGAAGCAGCATGTACCCCGGTCTGCCTT
CCCGGTTGGAGAAGGAGCTCAAGCAATTGTGGCTCACACGGGTCCTGCAA
GGCAACCCGGAGAGGTTGAACGTACGTGTTCTCATTCACTGGCGGACCAT
ACCCCCCCCAGAAGAAATCAACAGCTAATTCCATGATACAGAAGTTCAAG
GTGCGCATCGAGGACCCCCCGCGACGAAGACACATGGTCTTCCTGGGAGG
TGCCGTCCTCGCCAACCTGGTAAGCTTCGTCACTTCTTCCCTCCTTCCCC
TGTACACCCGTTTTCCAGTTCGAAAATCACACCATAGCTAACATAATTAC
CTAGATTGCCGACAAGGAGGACATGTGGGTTACCAAGCAAGAGTGGCAGG
AACAGGGTGCACGTGCCCTGGCCAAACTCGGCCCTAGATAGTTTTTCTCT
TTCATTCAGTACATACGTTGTATATTTCATTTCAACCTGACCTACCACCT
ATTACTACCTACCATCTATCGGGAGTTCTTCGCCCTCCTTGCGAGTTGAA
CCAAAACGCCTCCATCTTACGCATTCCCCGAGCAGCCTCTGTCCCCACCC
CCTCCTTCCTTACCCAGATGCTCTATTCTCATAGCTCCCGTCTTTTGTTC
AAATACTACGTACATACTATTACAGGTTTTTCTGGTGTGTCGGGGAGATC
AAGTGAAGTAAGGTCCGGCTTGAAGTCATGTCATCTAGTATGTAAACAAA
GAAGGGATCGAACTTCAGCTGTCTTGTATGTTTACTTCTTGTCATATCTA
ACTGCTCATTACGCCAC back to topCoding sequence (CDS) from alignment at ch8:3213756..3215972+ >KJC3_012317-T1 ID=KJC3_012317-T1|Name=KJC3_012317-T1|organism=Aspergillus niger KJC3|type=CDS|length=8169bp|location=Sequence derived from alignment at ch8:3213756..3215972+ (Aspergillus niger KJC3) ATGGCTGACATGCCCATTGTGCTCGACGGAGGAACTGGTTTCCTCAAGGT CGGATATGCTGCGCAGAACTTCCCCGAGCACCAGTTCCCCTCGATAGTGG GGCGGCCCATATTGCGAACGGAGGAGCAGGCCGGCGACATTGTCGTCAAG GATATCATGTGCGGAGATGAAGCTGCTGCTGCCAGATCTATGCTGCAAAT CACCTACCCTATGGAGAATGGTATCGTGAAGAGATGGGACGACATGCAAC ACCTATGGAACTACACCTTTTACGAGAAGATGAAGATCGATCCTACGGGC CGCAAGATCCTCTTGACCGAACCCCCCATGAATCCCCTGAAGAACCGGGA GCAAATGGCTGAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGTATACG TTGCTATTCAAGCTGTGCTTGCACTATACGCTCAGGGTCTCAGCAGTGGT GTGGTCGTTGACTCCGGTGACGGTGTCACCCACATTATCCCCGTCTACGA ATCCACAGTTCTTAACCACCACATTCGCCGGCTTGATGTCGCCGGTCGTG ATGTCACCCGTAACCTCATCGCCCTCCTGCTCCGTCGCGGTTATGCCTTG AACCGTACCGCCGATTTCGAAACCGTGCGCCAGATCAAGGAGAAGCTCTG CTATGTGTCCTACGATCTCGAGTTGGACAAGAAGCTCTCCGAAGACACAA CCGTCCTTGTCGAGTCCTACACCCTTCCCGATGGTCGCGTCATCCGCGTC GGCAGCGAGCGCTTTGAAGCCCCCGAATGCCTCTTCCAGCCGCACCTGGT GGATGTTGATCAGCCCGGTATCGCCGAGTTGCTCTTCAACACCATCCAGG GCGCCGATGTCGATGTGCGCTCCAGTCTCTACAAGGCTATTGTGCTCAGT GGAGGAAGCAGCATGTACCCCGGTCTGCCTTCCCGGTTGGAGAAGGAGCT CAAGCAATTGTGGCTCACACGGGTCCTGCAAGGCAACCCGGAGAGGTTGA ACAAGTTCAAGGTGCGCATCGAGGACCCCCCGCGACGAAGACACATGGTC TTCCTGGGAGGTGCCGTCCTCGCCAACCTGATTGCCGACAAGGAGGACAT GTGGGTTACCAAGCAAGAGTGGCAGGAACAGGGTGCACGTGCCCTGGCCA AACTCGGCCCTAGATAGATGGCTGACATGCCCATTGTGCTCGACGGAGGA ACTGGTTTCCTCAAGGTCGGATATGCTGCGCAGAACTTCCCCGAGCACCA GTTCCCCTCGATAGTGGGGCGGCCCATATTGCGAACGGAGGAGCAGGCCG GCGACATTGTCGTCAAGGATATCATGTGCGGAGATGAAGCTGCTGCTGCC AGATCTATGCTGCAAATCACCTACCCTATGGAGAATGGTATCGTGAAGAG ATGGGACGACATGCAACACCTATGGAACTACACCTTTTACGAGAAGATGA AGATCGATCCTACGGGCCGCAAGATCCTCTTGACCGAACCCCCCATGAAT CCCCTGAAGAACCGGGAGCAAATGGCTGAGGTTATGCTGGAAGGCTACAA CTTTGGAGGTGTATACGTTGCTATTCAAGCTGTGCTTGCACTATACGCTC AGGGTCTCAGCAGTGGTGTGGTCGTTGACTCCGGTGACGGTGTCACCCAC ATTATCCCCGTCTACGAATCCACAGTTCTTAACCACCACATTCGCCGGCT TGATGTCGCCGGTCGTGATGTCACCCGTAACCTCATCGCCCTCCTGCTCC GTCGCGGTTATGCCTTGAACCGTACCGCCGATTTCGAAACCGTGCGCCAG ATCAAGGAGAAGCTCTGCTATGTGTCCTACGATCTCGAGTTGGACAAGAA GCTCTCCGAAGACACAACCGTCCTTGTCGAGTCCTACACCCTTCCCGATG GTCGCGTCATCCGCGTCGGCAGCGAGCGCTTTGAAGCCCCCGAATGCCTC TTCCAGCCGCACCTGGTGGATGTTGATCAGCCCGGTATCGCCGAGTTGCT CTTCAACACCATCCAGGGCGCCGATGTCGATGTGCGCTCCAGTCTCTACA AGGCTATTGTGCTCAGTGGAGGAAGCAGCATGTACCCCGGTCTGCCTTCC CGGTTGGAGAAGGAGCTCAAGCAATTGTGGCTCACACGGGTCCTGCAAGG CAACCCGGAGAGGTTGAACAAGTTCAAGGTGCGCATCGAGGACCCCCCGC GACGAAGACACATGGTCTTCCTGGGAGGTGCCGTCCTCGCCAACCTGATT GCCGACAAGGAGGACATGTGGGTTACCAAGCAAGAGTGGCAGGAACAGGG TGCACGTGCCCTGGCCAAACTCGGCCCTAGATAGATGGCTGACATGCCCA TTGTGCTCGACGGAGGAACTGGTTTCCTCAAGGTCGGATATGCTGCGCAG AACTTCCCCGAGCACCAGTTCCCCTCGATAGTGGGGCGGCCCATATTGCG AACGGAGGAGCAGGCCGGCGACATTGTCGTCAAGGATATCATGTGCGGAG ATGAAGCTGCTGCTGCCAGATCTATGCTGCAAATCACCTACCCTATGGAG AATGGTATCGTGAAGAGATGGGACGACATGCAACACCTATGGAACTACAC CTTTTACGAGAAGATGAAGATCGATCCTACGGGCCGCAAGATCCTCTTGA CCGAACCCCCCATGAATCCCCTGAAGAACCGGGAGCAAATGGCTGAGGTT ATGCTGGAAGGCTACAACTTTGGAGGTGTATACGTTGCTATTCAAGCTGT GCTTGCACTATACGCTCAGGGTCTCAGCAGTGGTGTGGTCGTTGACTCCG GTGACGGTGTCACCCACATTATCCCCGTCTACGAATCCACAGTTCTTAAC CACCACATTCGCCGGCTTGATGTCGCCGGTCGTGATGTCACCCGTAACCT CATCGCCCTCCTGCTCCGTCGCGGTTATGCCTTGAACCGTACCGCCGATT TCGAAACCGTGCGCCAGATCAAGGAGAAGCTCTGCTATGTGTCCTACGAT CTCGAGTTGGACAAGAAGCTCTCCGAAGACACAACCGTCCTTGTCGAGTC CTACACCCTTCCCGATGGTCGCGTCATCCGCGTCGGCAGCGAGCGCTTTG AAGCCCCCGAATGCCTCTTCCAGCCGCACCTGGTGGATGTTGATCAGCCC GGTATCGCCGAGTTGCTCTTCAACACCATCCAGGGCGCCGATGTCGATGT GCGCTCCAGTCTCTACAAGGCTATTGTGCTCAGTGGAGGAAGCAGCATGT ACCCCGGTCTGCCTTCCCGGTTGGAGAAGGAGCTCAAGCAATTGTGGCTC ACACGGGTCCTGCAAGGCAACCCGGAGAGGTTGAACAAGTTCAAGGTGCG CATCGAGGACCCCCCGCGACGAAGACACATGGTCTTCCTGGGAGGTGCCG TCCTCGCCAACCTGATTGCCGACAAGGAGGACATGTGGGTTACCAAGCAA GAGTGGCAGGAACAGGGTGCACGTGCCCTGGCCAAACTCGGCCCTAGATA GATGGCTGACATGCCCATTGTGCTCGACGGAGGAACTGGTTTCCTCAAGG TCGGATATGCTGCGCAGAACTTCCCCGAGCACCAGTTCCCCTCGATAGTG GGGCGGCCCATATTGCGAACGGAGGAGCAGGCCGGCGACATTGTCGTCAA GGATATCATGTGCGGAGATGAAGCTGCTGCTGCCAGATCTATGCTGCAAA TCACCTACCCTATGGAGAATGGTATCGTGAAGAGATGGGACGACATGCAA CACCTATGGAACTACACCTTTTACGAGAAGATGAAGATCGATCCTACGGG CCGCAAGATCCTCTTGACCGAACCCCCCATGAATCCCCTGAAGAACCGGG AGCAAATGGCTGAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGTATAC GTTGCTATTCAAGCTGTGCTTGCACTATACGCTCAGGGTCTCAGCAGTGG TGTGGTCGTTGACTCCGGTGACGGTGTCACCCACATTATCCCCGTCTACG AATCCACAGTTCTTAACCACCACATTCGCCGGCTTGATGTCGCCGGTCGT GATGTCACCCGTAACCTCATCGCCCTCCTGCTCCGTCGCGGTTATGCCTT GAACCGTACCGCCGATTTCGAAACCGTGCGCCAGATCAAGGAGAAGCTCT GCTATGTGTCCTACGATCTCGAGTTGGACAAGAAGCTCTCCGAAGACACA ACCGTCCTTGTCGAGTCCTACACCCTTCCCGATGGTCGCGTCATCCGCGT CGGCAGCGAGCGCTTTGAAGCCCCCGAATGCCTCTTCCAGCCGCACCTGG TGGATGTTGATCAGCCCGGTATCGCCGAGTTGCTCTTCAACACCATCCAG GGCGCCGATGTCGATGTGCGCTCCAGTCTCTACAAGGCTATTGTGCTCAG TGGAGGAAGCAGCATGTACCCCGGTCTGCCTTCCCGGTTGGAGAAGGAGC TCAAGCAATTGTGGCTCACACGGGTCCTGCAAGGCAACCCGGAGAGGTTG AACAAGTTCAAGGTGCGCATCGAGGACCCCCCGCGACGAAGACACATGGT CTTCCTGGGAGGTGCCGTCCTCGCCAACCTGATTGCCGACAAGGAGGACA TGTGGGTTACCAAGCAAGAGTGGCAGGAACAGGGTGCACGTGCCCTGGCC AAACTCGGCCCTAGATAGATGGCTGACATGCCCATTGTGCTCGACGGAGG AACTGGTTTCCTCAAGGTCGGATATGCTGCGCAGAACTTCCCCGAGCACC AGTTCCCCTCGATAGTGGGGCGGCCCATATTGCGAACGGAGGAGCAGGCC GGCGACATTGTCGTCAAGGATATCATGTGCGGAGATGAAGCTGCTGCTGC CAGATCTATGCTGCAAATCACCTACCCTATGGAGAATGGTATCGTGAAGA GATGGGACGACATGCAACACCTATGGAACTACACCTTTTACGAGAAGATG AAGATCGATCCTACGGGCCGCAAGATCCTCTTGACCGAACCCCCCATGAA TCCCCTGAAGAACCGGGAGCAAATGGCTGAGGTTATGCTGGAAGGCTACA ACTTTGGAGGTGTATACGTTGCTATTCAAGCTGTGCTTGCACTATACGCT CAGGGTCTCAGCAGTGGTGTGGTCGTTGACTCCGGTGACGGTGTCACCCA CATTATCCCCGTCTACGAATCCACAGTTCTTAACCACCACATTCGCCGGC TTGATGTCGCCGGTCGTGATGTCACCCGTAACCTCATCGCCCTCCTGCTC CGTCGCGGTTATGCCTTGAACCGTACCGCCGATTTCGAAACCGTGCGCCA GATCAAGGAGAAGCTCTGCTATGTGTCCTACGATCTCGAGTTGGACAAGA AGCTCTCCGAAGACACAACCGTCCTTGTCGAGTCCTACACCCTTCCCGAT GGTCGCGTCATCCGCGTCGGCAGCGAGCGCTTTGAAGCCCCCGAATGCCT CTTCCAGCCGCACCTGGTGGATGTTGATCAGCCCGGTATCGCCGAGTTGC TCTTCAACACCATCCAGGGCGCCGATGTCGATGTGCGCTCCAGTCTCTAC AAGGCTATTGTGCTCAGTGGAGGAAGCAGCATGTACCCCGGTCTGCCTTC CCGGTTGGAGAAGGAGCTCAAGCAATTGTGGCTCACACGGGTCCTGCAAG GCAACCCGGAGAGGTTGAACAAGTTCAAGGTGCGCATCGAGGACCCCCCG CGACGAAGACACATGGTCTTCCTGGGAGGTGCCGTCCTCGCCAACCTGAT TGCCGACAAGGAGGACATGTGGGTTACCAAGCAAGAGTGGCAGGAACAGG GTGCACGTGCCCTGGCCAAACTCGGCCCTAGATAGATGGCTGACATGCCC ATTGTGCTCGACGGAGGAACTGGTTTCCTCAAGGTCGGATATGCTGCGCA GAACTTCCCCGAGCACCAGTTCCCCTCGATAGTGGGGCGGCCCATATTGC GAACGGAGGAGCAGGCCGGCGACATTGTCGTCAAGGATATCATGTGCGGA GATGAAGCTGCTGCTGCCAGATCTATGCTGCAAATCACCTACCCTATGGA GAATGGTATCGTGAAGAGATGGGACGACATGCAACACCTATGGAACTACA CCTTTTACGAGAAGATGAAGATCGATCCTACGGGCCGCAAGATCCTCTTG ACCGAACCCCCCATGAATCCCCTGAAGAACCGGGAGCAAATGGCTGAGGT TATGCTGGAAGGCTACAACTTTGGAGGTGTATACGTTGCTATTCAAGCTG TGCTTGCACTATACGCTCAGGGTCTCAGCAGTGGTGTGGTCGTTGACTCC GGTGACGGTGTCACCCACATTATCCCCGTCTACGAATCCACAGTTCTTAA CCACCACATTCGCCGGCTTGATGTCGCCGGTCGTGATGTCACCCGTAACC TCATCGCCCTCCTGCTCCGTCGCGGTTATGCCTTGAACCGTACCGCCGAT TTCGAAACCGTGCGCCAGATCAAGGAGAAGCTCTGCTATGTGTCCTACGA TCTCGAGTTGGACAAGAAGCTCTCCGAAGACACAACCGTCCTTGTCGAGT CCTACACCCTTCCCGATGGTCGCGTCATCCGCGTCGGCAGCGAGCGCTTT GAAGCCCCCGAATGCCTCTTCCAGCCGCACCTGGTGGATGTTGATCAGCC CGGTATCGCCGAGTTGCTCTTCAACACCATCCAGGGCGCCGATGTCGATG TGCGCTCCAGTCTCTACAAGGCTATTGTGCTCAGTGGAGGAAGCAGCATG TACCCCGGTCTGCCTTCCCGGTTGGAGAAGGAGCTCAAGCAATTGTGGCT CACACGGGTCCTGCAAGGCAACCCGGAGAGGTTGAACAAGTTCAAGGTGC GCATCGAGGACCCCCCGCGACGAAGACACATGGTCTTCCTGGGAGGTGCC GTCCTCGCCAACCTGATTGCCGACAAGGAGGACATGTGGGTTACCAAGCA AGAGTGGCAGGAACAGGGTGCACGTGCCCTGGCCAAACTCGGCCCTAGAT AGATGGCTGACATGCCCATTGTGCTCGACGGAGGAACTGGTTTCCTCAAG GTCGGATATGCTGCGCAGAACTTCCCCGAGCACCAGTTCCCCTCGATAGT GGGGCGGCCCATATTGCGAACGGAGGAGCAGGCCGGCGACATTGTCGTCA AGGATATCATGTGCGGAGATGAAGCTGCTGCTGCCAGATCTATGCTGCAA ATCACCTACCCTATGGAGAATGGTATCGTGAAGAGATGGGACGACATGCA ACACCTATGGAACTACACCTTTTACGAGAAGATGAAGATCGATCCTACGG GCCGCAAGATCCTCTTGACCGAACCCCCCATGAATCCCCTGAAGAACCGG GAGCAAATGGCTGAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGTATA CGTTGCTATTCAAGCTGTGCTTGCACTATACGCTCAGGGTCTCAGCAGTG GTGTGGTCGTTGACTCCGGTGACGGTGTCACCCACATTATCCCCGTCTAC GAATCCACAGTTCTTAACCACCACATTCGCCGGCTTGATGTCGCCGGTCG TGATGTCACCCGTAACCTCATCGCCCTCCTGCTCCGTCGCGGTTATGCCT TGAACCGTACCGCCGATTTCGAAACCGTGCGCCAGATCAAGGAGAAGCTC TGCTATGTGTCCTACGATCTCGAGTTGGACAAGAAGCTCTCCGAAGACAC AACCGTCCTTGTCGAGTCCTACACCCTTCCCGATGGTCGCGTCATCCGCG TCGGCAGCGAGCGCTTTGAAGCCCCCGAATGCCTCTTCCAGCCGCACCTG GTGGATGTTGATCAGCCCGGTATCGCCGAGTTGCTCTTCAACACCATCCA GGGCGCCGATGTCGATGTGCGCTCCAGTCTCTACAAGGCTATTGTGCTCA GTGGAGGAAGCAGCATGTACCCCGGTCTGCCTTCCCGGTTGGAGAAGGAG CTCAAGCAATTGTGGCTCACACGGGTCCTGCAAGGCAACCCGGAGAGGTT GAACAAGTTCAAGGTGCGCATCGAGGACCCCCCGCGACGAAGACACATGG TCTTCCTGGGAGGTGCCGTCCTCGCCAACCTGATTGCCGACAAGGAGGAC ATGTGGGTTACCAAGCAAGAGTGGCAGGAACAGGGTGCACGTGCCCTGGC CAAACTCGGCCCTAGATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012317-T1.utr5p1 | KJC3_012317-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012317-T1.utr3p1 | KJC3_012317-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09262MEK |
DBxref | InterPro:IPR043129 |
DBxref | InterPro:IPR020902 |
DBxref | InterPro:IPR004000 |
DBxref | PFAM:PF00022 |
Product | actin nucleation center |
Product | Arp2/3 complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:3213756..3215972 + |
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