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KJC3_012317-T3, KJC3_012317-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012317-T3
Unique NameKJC3_012317-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3213756..3215972+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012317-T3 ID=KJC3_012317-T3|Name=KJC3_012317-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2217bp|location=Sequence derived from alignment at ch8:3213756..3215972+ (Aspergillus niger KJC3)
CTTACTCCGTAGTTACTACTTTACTACTAACTGCTTCCCAACCCCGTCCA
GCCTACCGCTCTCTGGACGTCATCTCCCATGCTCCTTTTGTTTTTACCCC
TCCGGAATTGATTAATCTCTTGCAAACTCTCTCAATCTACATCCCTTCAC
CATGGCTGACATGCCCATTGGTATGTTTATGCGTGTTCCCCCTCCTCTTC
CTTACCTTCATCTTCCCTTACCCCCTCCCCGAGTTCTCCTTGTCGGTGCC
TGTCCCTCCCGTGCTTCCCAGCTAACCAACCACGCCCCCCAGTGCTCGAC
GGAGGAACTGGTTTCCTCAAGGTCGGATATGCTGCGCAGGTCTGTCATCA
CCTCCCATCCCATTGCGTACTCTTACTTACCTCCTCTTCTTCCCCATGGA
TAGAACTTCCCCGAGCACCAGTTCCCCTCGATAGTGGGGCGGCCCATATT
GCGAACGGAGGAGCAGGCCGGCGACATTGTCGTCAAGGATATCATGTGCG
GAGATGAAGCTGCTGCTGCCAGATCTATGCTGCAAATCACCTACCCTGTA
CGTCATTTACATTCGCGTGCCTTCGTTCTCCCCCCACCCCCGATCGCTCC
ATTGTCTCCCCGGAGGTGTGGCAGACGTGTTAACGTTGGGCCCGACTTGG
TATACAGATGGAGAATGGTATCGTGAAGAGATGGGACGACATGCAACACC
TATGGAACTACACCTTTTACGAGAAGATGAAGATCGATCCTACGGGCCGC
AAGATCCTCTTGACCGAACCCCCCATGAATCCCCTGAAGAACCGGGAGCA
AATGGCTGAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGTATACGTTG
CTATTCAAGCTGTGCTTGCACTATACGCTCAGGGTAAGTCTTGCACGCTT
CATATCCTCTCTCTTATCCCGCAGCTCTGATCGCCCGCTCTTTCGCAATC
CACAGGTCTCAGCAGTGGTGTGGTCGTTGACTCCGGTGACGGTGTCACCC
ACATTATCCCCGTCTACGAATCCACAGTTCTTAACCACCACATTCGCCGG
CTTGATGTCGCCGGTCGTGATGTCACCCGTAACCTCATCGCCCTCCTGCT
CCGTCGCGGTTATGCCTTGAACCGTACCGCCGATTTCGAAACCGTGCGCC
AGATCAAGGAGAAGCTCTGCTATGTGTCCTACGATCTCGAGTTGGACAAG
AAGCTCTCCGAAGACACAACCGTCCTTGTCGAGTCCTACACCCTTCCCGA
TGGTCGCGTCATCCGCGTCGGCAGCGAGCGCTTTGAAGCCCCCGAATGCC
TCTTCCAGCCGCACCTGGTGGATGTTGATCAGCCCGGTATCGCCGAGTTG
CTCTTCAACACCATCCAGGGCGCCGATGTCGATGTGCGCTCCAGTCTCTA
CAAGGCTATTGTGCTCAGTGGAGGAAGCAGCATGTACCCCGGTCTGCCTT
CCCGGTTGGAGAAGGAGCTCAAGCAATTGTGGCTCACACGGGTCCTGCAA
GGCAACCCGGAGAGGTTGAACGTACGTGTTCTCATTCACTGGCGGACCAT
ACCCCCCCCAGAAGAAATCAACAGCTAATTCCATGATACAGAAGTTCAAG
GTGCGCATCGAGGACCCCCCGCGACGAAGACACATGGTCTTCCTGGGAGG
TGCCGTCCTCGCCAACCTGGTAAGCTTCGTCACTTCTTCCCTCCTTCCCC
TGTACACCCGTTTTCCAGTTCGAAAATCACACCATAGCTAACATAATTAC
CTAGATTGCCGACAAGGAGGACATGTGGGTTACCAAGCAAGAGTGGCAGG
AACAGGGTGCACGTGCCCTGGCCAAACTCGGCCCTAGATAGTTTTTCTCT
TTCATTCAGTACATACGTTGTATATTTCATTTCAACCTGACCTACCACCT
ATTACTACCTACCATCTATCGGGAGTTCTTCGCCCTCCTTGCGAGTTGAA
CCAAAACGCCTCCATCTTACGCATTCCCCGAGCAGCCTCTGTCCCCACCC
CCTCCTTCCTTACCCAGATGCTCTATTCTCATAGCTCCCGTCTTTTGTTC
AAATACTACGTACATACTATTACAGGTTTTTCTGGTGTGTCGGGGAGATC
AAGTGAAGTAAGGTCCGGCTTGAAGTCATGTCATCTAGTATGTAAACAAA
GAAGGGATCGAACTTCAGCTGTCTTGTATGTTTACTTCTTGTCATATCTA
ACTGCTCATTACGCCAC
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Coding sequence (CDS) from alignment at ch8:3213756..3215972+

>KJC3_012317-T3 ID=KJC3_012317-T3|Name=KJC3_012317-T3|organism=Aspergillus niger KJC3|type=CDS|length=3828bp|location=Sequence derived from alignment at ch8:3213756..3215972+ (Aspergillus niger KJC3)
ATGGAGAATGGTATCGTGAAGAGATGGGACGACATGCAACACCTATGGAA
CTACACCTTTTACGAGAAGATGAAGATCGATCCTACGGGCCGCAAGATCC
TCTTGACCGAACCCCCCATGAATCCCCTGAAGAACCGGGAGCAAATGGCT
GAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGTATACGTTGCTATTCA
AGCTGTGCTTGCACTATACGCTCAGGGTCTCAGCAGTGGTGTGGTCGTTG
ACTCCGGTGACGGTGTCACCCACATTATCCCCGTCTACGAATCCACAGTT
CTTAACCACCACATTCGCCGGCTTGATGTCGCCGGTCGTGATGTCACCCG
TAACCTCATCGCCCTCCTGCTCCGTCGCGGTTATGCCTTGAACCGTACCG
CCGATTTCGAAACCGTGCGCCAGATCAAGGAGAAGCTCTGCTATGTGTCC
TACGATCTCGAGTTGGACAAGAAGCTCTCCGAAGACACAACCGTCCTTGT
CGAGTCCTACACCCTTCCCGATGGTCGCGTCATCCGCGTCGGCAGCGAGC
GCTTTGAAGCCCCCGAATGCCTCTTCCAGCCGCACCTGGTGGATGTTGAT
CAGCCCGGTATCGCCGAGTTGCTCTTCAACACCATCCAGGGCGCCGATGT
CGATGTGCGCTCCAGTCTCTACAAGGCTATTGTGCTCAGTGGAGGAAGCA
GCATGTACCCCGGTCTGCCTTCCCGGTTGGAGAAGGAGCTCAAGCAATTG
TGGCTCACACGGGTCCTGCAAGGCAACCCGGAGAGGTTGAACAAGTTCAA
GGTGCGCATCGAGGACCCCCCGCGACGAAGACACATGGTCTTCCTGGGAG
GTGCCGTCCTCGCCAACCTGATTGCCGACAAGGAGGACATGTGGGTTACC
AAGCAAGAGTGGCAGGAACAGGGTGCACGTGCCCTGGCCAAACTCGGCCC
TAGATAGATGGAGAATGGTATCGTGAAGAGATGGGACGACATGCAACACC
TATGGAACTACACCTTTTACGAGAAGATGAAGATCGATCCTACGGGCCGC
AAGATCCTCTTGACCGAACCCCCCATGAATCCCCTGAAGAACCGGGAGCA
AATGGCTGAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGTATACGTTG
CTATTCAAGCTGTGCTTGCACTATACGCTCAGGGTCTCAGCAGTGGTGTG
GTCGTTGACTCCGGTGACGGTGTCACCCACATTATCCCCGTCTACGAATC
CACAGTTCTTAACCACCACATTCGCCGGCTTGATGTCGCCGGTCGTGATG
TCACCCGTAACCTCATCGCCCTCCTGCTCCGTCGCGGTTATGCCTTGAAC
CGTACCGCCGATTTCGAAACCGTGCGCCAGATCAAGGAGAAGCTCTGCTA
TGTGTCCTACGATCTCGAGTTGGACAAGAAGCTCTCCGAAGACACAACCG
TCCTTGTCGAGTCCTACACCCTTCCCGATGGTCGCGTCATCCGCGTCGGC
AGCGAGCGCTTTGAAGCCCCCGAATGCCTCTTCCAGCCGCACCTGGTGGA
TGTTGATCAGCCCGGTATCGCCGAGTTGCTCTTCAACACCATCCAGGGCG
CCGATGTCGATGTGCGCTCCAGTCTCTACAAGGCTATTGTGCTCAGTGGA
GGAAGCAGCATGTACCCCGGTCTGCCTTCCCGGTTGGAGAAGGAGCTCAA
GCAATTGTGGCTCACACGGGTCCTGCAAGGCAACCCGGAGAGGTTGAACA
AGTTCAAGGTGCGCATCGAGGACCCCCCGCGACGAAGACACATGGTCTTC
CTGGGAGGTGCCGTCCTCGCCAACCTGATTGCCGACAAGGAGGACATGTG
GGTTACCAAGCAAGAGTGGCAGGAACAGGGTGCACGTGCCCTGGCCAAAC
TCGGCCCTAGATAGATGGAGAATGGTATCGTGAAGAGATGGGACGACATG
CAACACCTATGGAACTACACCTTTTACGAGAAGATGAAGATCGATCCTAC
GGGCCGCAAGATCCTCTTGACCGAACCCCCCATGAATCCCCTGAAGAACC
GGGAGCAAATGGCTGAGGTTATGCTGGAAGGCTACAACTTTGGAGGTGTA
TACGTTGCTATTCAAGCTGTGCTTGCACTATACGCTCAGGGTCTCAGCAG
TGGTGTGGTCGTTGACTCCGGTGACGGTGTCACCCACATTATCCCCGTCT
ACGAATCCACAGTTCTTAACCACCACATTCGCCGGCTTGATGTCGCCGGT
CGTGATGTCACCCGTAACCTCATCGCCCTCCTGCTCCGTCGCGGTTATGC
CTTGAACCGTACCGCCGATTTCGAAACCGTGCGCCAGATCAAGGAGAAGC
TCTGCTATGTGTCCTACGATCTCGAGTTGGACAAGAAGCTCTCCGAAGAC
ACAACCGTCCTTGTCGAGTCCTACACCCTTCCCGATGGTCGCGTCATCCG
CGTCGGCAGCGAGCGCTTTGAAGCCCCCGAATGCCTCTTCCAGCCGCACC
TGGTGGATGTTGATCAGCCCGGTATCGCCGAGTTGCTCTTCAACACCATC
CAGGGCGCCGATGTCGATGTGCGCTCCAGTCTCTACAAGGCTATTGTGCT
CAGTGGAGGAAGCAGCATGTACCCCGGTCTGCCTTCCCGGTTGGAGAAGG
AGCTCAAGCAATTGTGGCTCACACGGGTCCTGCAAGGCAACCCGGAGAGG
TTGAACAAGTTCAAGGTGCGCATCGAGGACCCCCCGCGACGAAGACACAT
GGTCTTCCTGGGAGGTGCCGTCCTCGCCAACCTGATTGCCGACAAGGAGG
ACATGTGGGTTACCAAGCAAGAGTGGCAGGAACAGGGTGCACGTGCCCTG
GCCAAACTCGGCCCTAGATAGATGGAGAATGGTATCGTGAAGAGATGGGA
CGACATGCAACACCTATGGAACTACACCTTTTACGAGAAGATGAAGATCG
ATCCTACGGGCCGCAAGATCCTCTTGACCGAACCCCCCATGAATCCCCTG
AAGAACCGGGAGCAAATGGCTGAGGTTATGCTGGAAGGCTACAACTTTGG
AGGTGTATACGTTGCTATTCAAGCTGTGCTTGCACTATACGCTCAGGGTC
TCAGCAGTGGTGTGGTCGTTGACTCCGGTGACGGTGTCACCCACATTATC
CCCGTCTACGAATCCACAGTTCTTAACCACCACATTCGCCGGCTTGATGT
CGCCGGTCGTGATGTCACCCGTAACCTCATCGCCCTCCTGCTCCGTCGCG
GTTATGCCTTGAACCGTACCGCCGATTTCGAAACCGTGCGCCAGATCAAG
GAGAAGCTCTGCTATGTGTCCTACGATCTCGAGTTGGACAAGAAGCTCTC
CGAAGACACAACCGTCCTTGTCGAGTCCTACACCCTTCCCGATGGTCGCG
TCATCCGCGTCGGCAGCGAGCGCTTTGAAGCCCCCGAATGCCTCTTCCAG
CCGCACCTGGTGGATGTTGATCAGCCCGGTATCGCCGAGTTGCTCTTCAA
CACCATCCAGGGCGCCGATGTCGATGTGCGCTCCAGTCTCTACAAGGCTA
TTGTGCTCAGTGGAGGAAGCAGCATGTACCCCGGTCTGCCTTCCCGGTTG
GAGAAGGAGCTCAAGCAATTGTGGCTCACACGGGTCCTGCAAGGCAACCC
GGAGAGGTTGAACAAGTTCAAGGTGCGCATCGAGGACCCCCCGCGACGAA
GACACATGGTCTTCCTGGGAGGTGCCGTCCTCGCCAACCTGATTGCCGAC
AAGGAGGACATGTGGGTTACCAAGCAAGAGTGGCAGGAACAGGGTGCACG
TGCCCTGGCCAAACTCGGCCCTAGATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARP2_1KJC3_012317Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012317-T3KJC3_012317-T3-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012317-T3.utr5p1KJC3_012317-T3.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_012317-T3.utr5p2KJC3_012317-T3.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_012317-T3.utr5p3KJC3_012317-T3.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012317-T3.exon1KJC3_012317-T3.exon1Aspergillus niger KJC3exon
KJC3_012317-T3.exon2KJC3_012317-T3.exon2Aspergillus niger KJC3exon
KJC3_012317-T3.exon3KJC3_012317-T3.exon3Aspergillus niger KJC3exon
KJC3_012317-T3.exon4KJC3_012317-T3.exon4Aspergillus niger KJC3exon
KJC3_012317-T3.exon5KJC3_012317-T3.exon5Aspergillus niger KJC3exon
KJC3_012317-T3.exon6KJC3_012317-T3.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012317-T3.cdsKJC3_012317-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012317-T3.utr3p1KJC3_012317-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR043129
DBxrefInterPro:IPR020902
DBxrefInterPro:IPR004000
DBxrefPFAM:PF00022
Product variant 3
Product actin nucleation center
ProductArp2/3 complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3213756..3215972 +
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