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KJC3_012344-T1, KJC3_012344-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012344-T1
Unique NameKJC3_012344-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3284555..3287455+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012344-T1 ID=KJC3_012344-T1|Name=KJC3_012344-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2901bp|location=Sequence derived from alignment at ch8:3284555..3287455+ (Aspergillus niger KJC3)
GCTCTCTTACTCTCGTCTTTGGGTCCCCTTCACTCTCTCTTTTTAGTTGG
TTCACCACCTTCACTTCTCGCAAGCCCACGCTTGGGCGTGCTCACTCTCA
TATCCATCCTTTTCTCTCCCTTCCTTCGTGCCTCTTGTCCTTCCTTTTGA
CCTTCGCGGCCTGGAAGCTCGCTGTCTTTCGTTTTGACCGATCTAGATCG
GATGTGGCCCAGCCATTTTTGAACTATATCTGGGGATTCTCAGACTTCCA
TTCTTTTCCCTCCCACATTCTTTAACGCGCTTGCGCCCCTTTCACGCCAC
TACGCGACTAGCTTATCTCATTGTGGTGTCAGAGAAAAGAAAAAGTATAG
CGATCTGTGTCACGTATCATATCAACTTGTATCCGTTCTTTGATGCCAGT
GAAACTACTCACAGACACTCTTTGACATCGAGTCTGCGTTAACATATACC
TGCCCATCTTCTGCACTCTCTGTGTGGATACTGGCACAAGTACGCGGGCT
ACGATCATATTTCCGTCACACTTGGTTCAACTCTAGCTTACTACTAGAGG
CCCAACTAATTGCAACATACAAGGCGCCACAGCCCTAAACTATCTCAATC
ATGGTGCATGCACACGCGCACCGTGACCGCGTGCCCCGTTTGAAGGGCAG
AAGCCCGGAAAATGATGCGGTGACGGTGGTCTATGTGACTATGAGTGCGG
ATTTCGATGGCCCAATCGGCGGCTATGTCACGGGGAGCAAGACGTCCTCA
GAAAGCAGCAAAAACACAGCTGTTGGTATCGGCGCTCCTGTCAAAGGATC
GAAGTCGTCCTCGACAGCACAAGAGACCGAGACGACCGGGGCCACTGAGG
CAGCAGCGACAAAGACAAAAGCAGAGACTCATGCTACCGCCACGAAGACT
GCTGAGACCGAAATCACGACGGCACCCCAGCCAACGACAACCGAGGCGAC
CAAAGAGACCCAAAGTGCGAGCAAAGAGGAAAATTCTTCGGCAAATAAGA
CCACCTTTCAGACCAGTACTTCGTCTGCTACATCTTTGGAATCATCCTCG
GTATCCTCCCAAGGCAAGGCTGGACTGGAGAGTTCCGATGTCACTGGGTC
TTCTGCGTCGGCATCTGCAACCGCAGTTTCGGGATCAGGAGGGCTCTCTG
GAGGTGCGAAAGCCGGCATTGCTATCGGTGTGATATTGGCGGTTGGCTTG
GTTGCAGGCCTCGTCCTTCTCTGGGTACGGAAGAAGAAACAGGAACAGAA
AATCCAAAAGGAAGTAGCCGAAGATGAAAAGTTCTGGGGCTCAGATCCTG
TCGCGCCACCACCACCACCTCCGAAGACTGAGCCGATGAGTTCTCTGGAT
CCACCTCAGCTCCAAGTCCGTCCAGTCACACAGTTTGCGCCATTTGCATC
AGAATTCAGTGCTGGTGCTGGTGCTGCAAGTCCCTCTACGGTTGCTGCCG
ACGCTGCTGTCGCCTCAGGTGCAGTCGCTGCTTCAGGTGCAGCTGCTGCC
TCAGGTGCGGCTGGTACACGGAACCTGACTGGAAATCCCTCACCGGTTCA
CACACCACAATCAAGTACCGCCAGCGCAGATCCCTTCACTGATCCTGTCA
ATCCATTCAATCACCCTTCGGAGGTCTCGCCGCCGTCTACATCACACGGT
TCCGTTACTCAGCTTGGCCCTGTCCCAGAAGAACCTGCGGCTGCTGATCT
CGCTTCAGAAACAGCCACGGCAACCGGAATCGCTGTGACTGGTGTTGTAG
CTGGTGCTGCTGTGGCCGCGGTTGCAGCCTCCAGCGCGTCAGATAAGGAT
CTGCCTAGCCGCCCTGAAAGTTCCGTATCTAGTGTCTCTGAATCCAGTTC
GACCAATCCTGGTCCAGATGGTCCTTCAGATGCCAATGCGGCCCCAGCTT
CAGCTGCTCCTGCCGTCTCTCCTGTTCAATCAACTGCATCGGCTGAACCC
GTCCCTGTTCCAGTTCCAGTTCCCGTTTCTGCTCCTGCTCCTGCTCCTGC
CTCATCCAATGTGCATCGCGTGCACTTGGATTTCGCTCCTTCAATGGCCG
ATGAACTGGAGCTACATGCCGGTGATCTTGTCAGACTACTGCACGAGTAC
GATGATGGATGGGCTCTATGTATCCGTATGGACCGCTCTCAGCAAGGTGT
CGTCCCCCGCTCATGTCTTTCCTCGCGTCCTTTGATGCCCCGGATGGGCC
CGCCCCCGGGTGCAGCCCCTGGACCGCGAGGACCGCCAATGATGGGCCCT
AACAGTCCCATGCCGGCTGGAACCATGATGCCGACTCCGCGCTTTTACCC
TCAGGAAGGTCGTCCAATGTCACCGGCTCGCCCCATGTCACCGGCTCGCC
CCATGTCACCGGCTCGCCCCATGTCACCGGCTCGCCCCATGTCACCGGCT
CGCCCCATGTCACCGGCTCGCCCCATGTCACCGGCTCGCCCCATGTCACC
GGCTCGCCCCATGTCACCGGCTCGCCCCATGTCGCCGGCACGTCCAATGT
CGCCGGCGCGCCCCATGCCTCCTGCTCACCCCGGTTACGCTGGTCCTCCG
CAGTCGCAGCCCTATCCTCAGCGTCCTATGTCTCCGGCACATTTCCCACA
ACCTCCGAGATCTTTCTCTCCCGGTCCCGGTCCAATGGTTCCTAGGTCTT
TGAGTCCTGGGCCTTACGGACCCCCGGGAATGCAAGGTCCCCGCATGCCA
GTCAACCAACGGATGCGCAGCAACAGCACAGGAGGTGTGGCTGGACCGAA
CGCTCGAATGGCAGGGCTAGCCGGACCGAGTCCTCTCGGAACTCCGCTCG
GACCAACTTCCATGCATCTAGCATCTCTGCATCCATCAGTCAACGCTGCA
CCAGCTTCGGCAACCATTGAGACAGTCGCCCCCGAAAATAGCCATGAGTA
A
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Coding sequence (CDS) from alignment at ch8:3284555..3287455+

>KJC3_012344-T1 ID=KJC3_012344-T1|Name=KJC3_012344-T1|organism=Aspergillus niger KJC3|type=CDS|length=2301bp|location=Sequence derived from alignment at ch8:3284555..3287455+ (Aspergillus niger KJC3)
ATGGTGCATGCACACGCGCACCGTGACCGCGTGCCCCGTTTGAAGGGCAG
AAGCCCGGAAAATGATGCGGTGACGGTGGTCTATGTGACTATGAGTGCGG
ATTTCGATGGCCCAATCGGCGGCTATGTCACGGGGAGCAAGACGTCCTCA
GAAAGCAGCAAAAACACAGCTGTTGGTATCGGCGCTCCTGTCAAAGGATC
GAAGTCGTCCTCGACAGCACAAGAGACCGAGACGACCGGGGCCACTGAGG
CAGCAGCGACAAAGACAAAAGCAGAGACTCATGCTACCGCCACGAAGACT
GCTGAGACCGAAATCACGACGGCACCCCAGCCAACGACAACCGAGGCGAC
CAAAGAGACCCAAAGTGCGAGCAAAGAGGAAAATTCTTCGGCAAATAAGA
CCACCTTTCAGACCAGTACTTCGTCTGCTACATCTTTGGAATCATCCTCG
GTATCCTCCCAAGGCAAGGCTGGACTGGAGAGTTCCGATGTCACTGGGTC
TTCTGCGTCGGCATCTGCAACCGCAGTTTCGGGATCAGGAGGGCTCTCTG
GAGGTGCGAAAGCCGGCATTGCTATCGGTGTGATATTGGCGGTTGGCTTG
GTTGCAGGCCTCGTCCTTCTCTGGGTACGGAAGAAGAAACAGGAACAGAA
AATCCAAAAGGAAGTAGCCGAAGATGAAAAGTTCTGGGGCTCAGATCCTG
TCGCGCCACCACCACCACCTCCGAAGACTGAGCCGATGAGTTCTCTGGAT
CCACCTCAGCTCCAAGTCCGTCCAGTCACACAGTTTGCGCCATTTGCATC
AGAATTCAGTGCTGGTGCTGGTGCTGCAAGTCCCTCTACGGTTGCTGCCG
ACGCTGCTGTCGCCTCAGGTGCAGTCGCTGCTTCAGGTGCAGCTGCTGCC
TCAGGTGCGGCTGGTACACGGAACCTGACTGGAAATCCCTCACCGGTTCA
CACACCACAATCAAGTACCGCCAGCGCAGATCCCTTCACTGATCCTGTCA
ATCCATTCAATCACCCTTCGGAGGTCTCGCCGCCGTCTACATCACACGGT
TCCGTTACTCAGCTTGGCCCTGTCCCAGAAGAACCTGCGGCTGCTGATCT
CGCTTCAGAAACAGCCACGGCAACCGGAATCGCTGTGACTGGTGTTGTAG
CTGGTGCTGCTGTGGCCGCGGTTGCAGCCTCCAGCGCGTCAGATAAGGAT
CTGCCTAGCCGCCCTGAAAGTTCCGTATCTAGTGTCTCTGAATCCAGTTC
GACCAATCCTGGTCCAGATGGTCCTTCAGATGCCAATGCGGCCCCAGCTT
CAGCTGCTCCTGCCGTCTCTCCTGTTCAATCAACTGCATCGGCTGAACCC
GTCCCTGTTCCAGTTCCAGTTCCCGTTTCTGCTCCTGCTCCTGCTCCTGC
CTCATCCAATGTGCATCGCGTGCACTTGGATTTCGCTCCTTCAATGGCCG
ATGAACTGGAGCTACATGCCGGTGATCTTGTCAGACTACTGCACGAGTAC
GATGATGGATGGGCTCTATGTATCCGTATGGACCGCTCTCAGCAAGGTGT
CGTCCCCCGCTCATGTCTTTCCTCGCGTCCTTTGATGCCCCGGATGGGCC
CGCCCCCGGGTGCAGCCCCTGGACCGCGAGGACCGCCAATGATGGGCCCT
AACAGTCCCATGCCGGCTGGAACCATGATGCCGACTCCGCGCTTTTACCC
TCAGGAAGGTCGTCCAATGTCACCGGCTCGCCCCATGTCACCGGCTCGCC
CCATGTCACCGGCTCGCCCCATGTCACCGGCTCGCCCCATGTCACCGGCT
CGCCCCATGTCACCGGCTCGCCCCATGTCACCGGCTCGCCCCATGTCACC
GGCTCGCCCCATGTCACCGGCTCGCCCCATGTCGCCGGCACGTCCAATGT
CGCCGGCGCGCCCCATGCCTCCTGCTCACCCCGGTTACGCTGGTCCTCCG
CAGTCGCAGCCCTATCCTCAGCGTCCTATGTCTCCGGCACATTTCCCACA
ACCTCCGAGATCTTTCTCTCCCGGTCCCGGTCCAATGGTTCCTAGGTCTT
TGAGTCCTGGGCCTTACGGACCCCCGGGAATGCAAGGTCCCCGCATGCCA
GTCAACCAACGGATGCGCAGCAACAGCACAGGAGGTGTGGCTGGACCGAA
CGCTCGAATGGCAGGGCTAGCCGGACCGAGTCCTCTCGGAACTCCGCTCG
GACCAACTTCCATGCATCTAGCATCTCTGCATCCATCAGTCAACGCTGCA
CCAGCTTCGGCAACCATTGAGACAGTCGCCCCCGAAAATAGCCATGAGTA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012344KJC3_012344Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012344-T1.utr5p1KJC3_012344-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012344-T1.exon1KJC3_012344-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012344-T1.cdsKJC3_012344-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012344-T1KJC3_012344-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR001452
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3284555..3287455 +
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