|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3291138..3292386- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012346-T1 ID=KJC3_012346-T1|Name=KJC3_012346-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1249bp|location=Sequence derived from alignment at ch8:3291138..3292386- (Aspergillus niger KJC3)
CACAACAGCGGACCGACATATAACTTGTTGCTGGTCCCAATAAATTTCTT
GACTGGCCTGCCTTTCTCTCCAGTCCCCCGCGAAAACTACAAATCATCAT
GGCACCTCCCTCGTCTCCTACTGACCACCACATCGTGGCTCTGCAGGGCG
ATTTTATCAGAATCCCCAAGTTCGAACTACCCGCTCCTTATACTCACACC
ACAAAAGTCTACGGGCTGACATCGCTCTCCGAACTTCATGAACGGATACA
CGATGCCTCTATCTTAGTTCTATCGGCGCTGCGAATCGATGCAGAGGCAC
TGTCTCCCGAGGTGACACCATACCTGAAACTGATCGTGATAGTCGCCGCA
GGCAGCGACTGCGTGGATCTCGAAGCATGCAGAAAGAGGGGCATTACTGT
GAGCAACTGTCCCGCAGCAAACACCGAGGCTGTTTCCGAGCATGCAATTG
GACTATACTTCTCTGTACGCCGTAGAGTCCTGCGCGCGCACACATTGACC
CGCGCGGGCGAATGGACCCGGAAAAAGACCCTCGTCTTCGATTGTGTGAA
TCACGACGGAACGCAACCCCTGACCTGCCAGGAGGAGGTGGCCGGAATTA
TCGGAAATGGCGCTGTCGGTACGTGCTTCCGGCGATCCATGGTTTATAAT
TCGCTTGAATCCGAGCCTGACTGACTCAAATTCAGGGAAGCGGATCGCCC
AATTAGCCCGTGGGCTGGGAATGAAGGTCATTATCGCAGGCCGCAAAGCA
CTCGGTGATGGTAGCACACCGACTCATGCTGGTGACGGTGAAGAGAGAGT
TTCTTTCGCCGAAGTGATTAAGCGGAGCACGGTGATTTTCATTGCAGTTC
CCCTTGCTCCTTCGACGCGGAATCTGCTATCAGCTACAGAATTCGAAGCC
ATGTCGCCTCATGCGGTCTTGGTCAATGTCTCGAGGGGAGGAGTGGTGGA
TGAAGTGGCACTTGTCCGAGCATTGCAGGAGAACCGCATCACCGGTGCTG
CAACCGATGTGTTCGAAAAAGAACCTGCCGGACCGGAAAACTGTGCTCTG
CTGGGTGAAGGGACCGAGGATCTGAACCTGGTTCTTACACCTCATATTGC
ATGGGCCACGCAGAAGACGTTGATCAACTATGAGCGGAAATTGAAGGAGA
CCGTCGAGAAGTGGATGGTGGGGGAATTCATGAATGTAGTGACATGACTT
AGGATTTTTCAATTTGGTAAATAGATAGATACCATGAATAACCATTTCG back to topCoding sequence (CDS) from alignment at ch8:3291138..3292386- >KJC3_012346-T1 ID=KJC3_012346-T1|Name=KJC3_012346-T1|organism=Aspergillus niger KJC3|type=CDS|length=2064bp|location=Sequence derived from alignment at ch8:3291138..3292386- (Aspergillus niger KJC3)
GGAAGCGGATCGCCCAATTAGCCCGTGGGCTGGGAATGAAGGTCATTATC
GCAGGCCGCAAAGCACTCGGTGATGGTAGCACACCGACTCATGCTGGTGA
CGGTGAAGAGAGAGTTTCTTTCGCCGAAGTGATTAAGCGGAGCACGGTGA
TTTTCATTGCAGTTCCCCTTGCTCCTTCGACGCGGAATCTGCTATCAGCT
ACAGAATTCGAAGCCATGTCGCCTCATGCGGTCTTGGTCAATGTCTCGAG
GGGAGGAGTGGTGGATGAAGTGGCACTTGTCCGAGCATTGCAGGAGAACC
GCATCACCGGTGCTGCAACCGATGTGTTCGAAAAAGAACCTGCCGGACCG
GAAAACTGTGCTCTGCTGGGTGAAGGGACCGAGGATCTGAACCTGGTTCT
TACACCTCATATTGCATGGGCCACGCAGAAGACGTTGATCAACTATGAGC
GGAAATTGAAGGAGACCGTCGAGAAGTGGATGGTGGGGGAATTCATGAAT
GTAGTGACATGAATGGCACCTCCCTCGTCTCCTACTGACCACCACATCGT
GGCTCTGCAGGGCGATTTTATCAGAATCCCCAAGTTCGAACTACCCGCTC
CTTATACTCACACCACAAAAGTCTACGGGCTGACATCGCTCTCCGAACTT
CATGAACGGATACACGATGCCTCTATCTTAGTTCTATCGGCGCTGCGAAT
CGATGCAGAGGCACTGTCTCCCGAGGTGACACCATACCTGAAACTGATCG
TGATAGTCGCCGCAGGCAGCGACTGCGTGGATCTCGAAGCATGCAGAAAG
AGGGGCATTACTGTGAGCAACTGTCCCGCAGCAAACACCGAGGCTGTTTC
CGAGCATGCAATTGGACTATACTTCTCTGTACGCCGTAGAGTCCTGCGCG
CGCACACATTGACCCGCGCGGGCGAATGGACCCGGAAAAAGACCCTCGTC
TTCGATTGTGTGAATCACGACGGAACGCAACCCCTGACCTGCCAGGAGGA
GGTGGCCGGAATTATCGGAAATGGCGCTGTCGGGAAGCGGATCGCCCAAT
TAGCCCGTGGGCTGGGAATGAAGGTCATTATCGCAGGCCGCAAAGCACTC
GGTGATGGTAGCACACCGACTCATGCTGGTGACGGTGAAGAGAGAGTTTC
TTTCGCCGAAGTGATTAAGCGGAGCACGGTGATTTTCATTGCAGTTCCCC
TTGCTCCTTCGACGCGGAATCTGCTATCAGCTACAGAATTCGAAGCCATG
TCGCCTCATGCGGTCTTGGTCAATGTCTCGAGGGGAGGAGTGGTGGATGA
AGTGGCACTTGTCCGAGCATTGCAGGAGAACCGCATCACCGGTGCTGCAA
CCGATGTGTTCGAAAAAGAACCTGCCGGACCGGAAAACTGTGCTCTGCTG
GGTGAAGGGACCGAGGATCTGAACCTGGTTCTTACACCTCATATTGCATG
GGCCACGCAGAAGACGTTGATCAACTATGAGCGGAAATTGAAGGAGACCG
TCGAGAAGTGGATGGTGGGGGAATTCATGAATGTAGTGACATGAATGGCA
CCTCCCTCGTCTCCTACTGACCACCACATCGTGGCTCTGCAGGGCGATTT
TATCAGAATCCCCAAGTTCGAACTACCCGCTCCTTATACTCACACCACAA
AAGTCTACGGGCTGACATCGCTCTCCGAACTTCATGAACGGATACACGAT
GCCTCTATCTTAGTTCTATCGGCGCTGCGAATCGATGCAGAGGCACTGTC
TCCCGAGGTGACACCATACCTGAAACTGATCGTGATAGTCGCCGCAGGCA
GCGACTGCGTGGATCTCGAAGCATGCAGAAAGAGGGGCATTACTGTGAGC
AACTGTCCCGCAGCAAACACCGAGGCTGTTTCCGAGCATGCAATTGGACT
ATACTTCTCTGTACGCCGTAGAGTCCTGCGCGCGCACACATTGACCCGCG
CGGGCGAATGGACCCGGAAAAAGACCCTCGTCTTCGATTGTGTGAATCAC
GACGGAACGCAACCCCTGACCTGCCAGGAGGAGGTGGCCGGAATTATCGG
AAATGGCGCTGTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| GO:0051287 | NAD binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012346-T1.utr3p1 | KJC3_012346-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012346-T1.utr5p1 | KJC3_012346-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR006139 |
| DBxref | InterPro:IPR006140 |
| DBxref | PFAM:PF02826 |
| DBxref | PFAM:PF00389 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3291138..3292386 - |
|
