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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3308969..3312343- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012353-T1 ID=KJC3_012353-T1|Name=KJC3_012353-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3375bp|location=Sequence derived from alignment at ch8:3308969..3312343- (Aspergillus niger KJC3) CCCGCGGATCCCTCGCTGGAAGATCGCAAGTCGACAGATTTCCTCCCTGT
CACCTCCTCTCCCCTTCCCCGCTCGCCCGTCATGTCCATTGATTTTCCCC
GCGAGGAGGAGGCCATCCTCCAGAGGTGGAGGGAGATCAACGCCTTCCGG
AGGCAGGTTGAGCTCTCCGAAGGCCGTAAACCATACACCTTCTACGATGG
CCCTCCGTTCGCTACTGGTCTGCCTCACTATGGTCACTTATTGGCCTCGA
CCATTAAGGATATCATTCCCCGCTATTGGTCCATGAAGGGTCACTATGTC
GAGCGTCGCTTTGGCTGGGATACCCATGGTGTGCCCATCGAGTACGAGAT
CGACAAGAAGCTGGGCATGTCGGGTCTCGAGGCCGTCGAGAAAATTGGTA
TTGAGAAGTATAACGAGGAGTGCAGAGCCATTGTCATGAGATTCGCTTCG
GAATGGCGTCAAACTATCGAGAGACTGGGTCGTTGGATTGACTTTGACAA
TGACTACAAGGTAGACAGGCCCATCATCTTCTACCCCTCGTCCTCTGAAT
ATGCTGACCATGCATTGTAGACCATGAACGTGAGCTTCATGGAATCAGTG
TGGTGGGTCTTCAAGCAGCTGTTCGACAAGGACCTTGTCTACAGAGGCTA
CCGCGTCATGCCTTACTCGACCGCCCTCAACACCCCCCTCAGTAACTTCG
AGGCTCAACAAAACTACAAGGATGTGCAAGACCCCGCTGTCGTCGTCACA
TTCCCCCTCGTCCACGATCCCGAGACTTCCCTTCTTGCATGGACGACCAC
ACCATGGACCTTGCCCTCGAACATTGCTCTGGCGGTCAACCCCACCTACG
AATACATCAAGATCCTCGACGAGGCATCCGGAAAGCACTACATTCTGCTC
GAGTCTCTGCTCCGGACGCTGTACAAGGACCCCAAGAAGGCCAAGTTCAA
GATTGTCGACCGCTTCAAGGGTGCTGCCATGAAAGACTGGAAGTACCAGC
CCCTCTTCGATTACTTCTACGAAGAGTTCAAGGAGCACGGTTTCCGGGTC
CTTAACGCCGAGTACGTTACTGCTGAGGACGGTACCGGTATTGTCCACCA
GGCTCCTGCCTTTGGTGAGGACGATTACAGAGTTGGCATGGAGAATGGTG
TCATCAGTGAGACCCGCCTCCCCCCTAACCCTGTTGACGAAAAGGGTTGC
TACACAGCCGAAGTGAGGGACTTCGAGGGCCAGCATGTCAAGGCTGCCGA
CAGGGGCATCATCAAGCACCTGAAGGCTGCTGGACGCCTGGTTGTCGACA
GCCAGATTACTCACAGCTACCCCTTCTGCTGGCGTTCCGACACTCCCTTG
ATCTACCGGGCCGTGCCGGCTTGGTTCGTCAAGATTGGCCCTATCATCCC
TCAGATGCTTCAGGGCATTGACGACTCCCACTGGGTGCCGAGCTTTGTCA
AGGAAAGACGCTTCTCCAGTTGGATCCAGAATGCTCGCGACTGGAACATC
TCGAGAAACCGCTTCTGGGGTACTCCTCTGCCCTTGTGGGTGAGCGATGA
CTTCAAGGAGGTTGTCGCCGTTGGTAGTGCCGAGGAACTCAAGCAGCTTA
GTGGTTACGAAGGTGAACTCACCGACCTGCACCGCGACAAGGTCGACAAG
ATCACCATCCCCAGCAAGCAGGGCAAGGGCGTCCTTCGCCGTGTCAGCGA
GGTGTTTGATTGCTGGTTTGAGTCTGGCAGCATGCCCTACGCATCCCAGC
ACTACCCCTTTGAGAACAAGGAACAGTTCGAGAACAGCTTCCCCGGTGAT
TTCATCGCCGAGGGTCTTGATCAGACTCGTGGTTGGTTCTACACCCTGAC
TGTGCTGGGAACCCACCTGTTCGGCAAGCTCCCGTTCAAGAACTGCGTCG
TCAACGGTATTGTTCTCGCAGAGGATGGAAAGAAGATGTCCAAGAGACTT
AAGAACTACCCCGATCCCGCCCTCGTCATGGAGCGCTACGGTTCCGATGC
TCTTCGCCTCTACTTGATCAACTCCCCTGTTGTGCGCGCCGAGCCCCTTC
GGTTCAAGGAGTCGGGCGTCAAGGAGATTGTCGCCAAGGTTCTCCTTCCT
CTCTGGAACAGCTACAAGTTCTTCGAGGGTCAGGCCGCTCTGTTCAAGAA
GACCCAGGGCTTTGATTATACCTTTGACCCCAAGGCGGAGGCTACTAACA
CCAATGTCATGGACCGCTGGATCCTGGCCAGTTGCCAGAGTCTTCTCAAG
TTCGTCAACGAGGAGATGGCCGGATACCGCCTGTACACGGTCGTTCCCCG
CCTGCTTGAATTGATTGACAACACCACCAACTGGTACATTCGTTTCAACC
GCAGACGTCTCAAGGGTGAGAACGGTGTCGATGATACCCAGCATGCCCTG
AACACCCTCTTTGAGGTCCTGTACACTCTGGTCCGGGGCCTGGCTCCCTT
CACTCCTTTCCTTACCGACACCATCTACCTGAAGCTTCTCCCTCACATTC
CCGAGGCGCTCCGTAGCGAGGACAGCCGCAGTGTCCACTTCCTTCCCTTC
CCCGAGGTTCGGGAAGAGCTTTTCGATGAGGTCGTCGAGAGGCGCGTGGC
CCGGATGCAGAAGGTCATTGATATGGCTCGTATCTCCCGTGAACGTCGGA
ACATTGGTCTGAAGACGCCGCTGAAGACTCTCGTTGTCATTCACCAGGAT
CAGCAGTACCTGGACGATGTGAAGTCCCTGCAGGGATACATCCTCGAGGA
GCTGAACGTTCTTGAGCTTGTCCTGTCCTCGGACGAGGAGAAGTACAACG
TCCAGTACAGTGTGACCGCCGACTGGCCTACGTTGGGCAAGAAGCTTAAG
AAGGAGGTCCAGAAGGTCAAGAAGGCCTTGCCCTCTCTCACCAGTGAGGA
CGTGAAGAAGTTCGTCGCCGATAAGAAGATGCTTGTTGACGGCATTGAGC
TTGTTGAAGGTGACCTGGTCGTGAAGCGTGGAATGAAGGAGGACAGCGCG
TCCGCGAACATGGAACCCAACACGGACAGCGACCTGCTGACCATCCTGGA
CGCTAACCTGTACCCCGAGTTGGCCGAGCAAGGGTTGGGCCGTGAGATCA
TCAACCGTCTGCAGCGTCTTCGTAAGAAGGCGGGTCTTGTCCCCACCGAC
GATGTGAAGATGGAGTATGCTGTCCTGTCGGATCCTGAGGATGTGGGCAT
TAGCAAGGCGTTTGAGACGCAAGCCAAGGCCATCGAAAAGGTTGTGCGCA
GACCGCTCGACCGCTACGAGCTTGTGGACGGCAAGGTGCCCAACGGAGAG
GAGCCGGGAATGATCATCCAGGAAGAGCAGGAAGTACAAAAGGCCACCTT
CCTGTTGCGCTTGCTTAAGTTGTAG back to topCoding sequence (CDS) from alignment at ch8:3308969..3312343- >KJC3_012353-T1 ID=KJC3_012353-T1|Name=KJC3_012353-T1|organism=Aspergillus niger KJC3|type=CDS|length=6468bp|location=Sequence derived from alignment at ch8:3308969..3312343- (Aspergillus niger KJC3) ACCATGAACGTGAGCTTCATGGAATCAGTGTGGTGGGTCTTCAAGCAGCT GTTCGACAAGGACCTTGTCTACAGAGGCTACCGCGTCATGCCTTACTCGA CCGCCCTCAACACCCCCCTCAGTAACTTCGAGGCTCAACAAAACTACAAG GATGTGCAAGACCCCGCTGTCGTCGTCACATTCCCCCTCGTCCACGATCC CGAGACTTCCCTTCTTGCATGGACGACCACACCATGGACCTTGCCCTCGA ACATTGCTCTGGCGGTCAACCCCACCTACGAATACATCAAGATCCTCGAC GAGGCATCCGGAAAGCACTACATTCTGCTCGAGTCTCTGCTCCGGACGCT GTACAAGGACCCCAAGAAGGCCAAGTTCAAGATTGTCGACCGCTTCAAGG GTGCTGCCATGAAAGACTGGAAGTACCAGCCCCTCTTCGATTACTTCTAC GAAGAGTTCAAGGAGCACGGTTTCCGGGTCCTTAACGCCGAGTACGTTAC TGCTGAGGACGGTACCGGTATTGTCCACCAGGCTCCTGCCTTTGGTGAGG ACGATTACAGAGTTGGCATGGAGAATGGTGTCATCAGTGAGACCCGCCTC CCCCCTAACCCTGTTGACGAAAAGGGTTGCTACACAGCCGAAGTGAGGGA CTTCGAGGGCCAGCATGTCAAGGCTGCCGACAGGGGCATCATCAAGCACC TGAAGGCTGCTGGACGCCTGGTTGTCGACAGCCAGATTACTCACAGCTAC CCCTTCTGCTGGCGTTCCGACACTCCCTTGATCTACCGGGCCGTGCCGGC TTGGTTCGTCAAGATTGGCCCTATCATCCCTCAGATGCTTCAGGGCATTG ACGACTCCCACTGGGTGCCGAGCTTTGTCAAGGAAAGACGCTTCTCCAGT TGGATCCAGAATGCTCGCGACTGGAACATCTCGAGAAACCGCTTCTGGGG TACTCCTCTGCCCTTGTGGGTGAGCGATGACTTCAAGGAGGTTGTCGCCG TTGGTAGTGCCGAGGAACTCAAGCAGCTTAGTGGTTACGAAGGTGAACTC ACCGACCTGCACCGCGACAAGGTCGACAAGATCACCATCCCCAGCAAGCA GGGCAAGGGCGTCCTTCGCCGTGTCAGCGAGGTGTTTGATTGCTGGTTTG AGTCTGGCAGCATGCCCTACGCATCCCAGCACTACCCCTTTGAGAACAAG GAACAGTTCGAGAACAGCTTCCCCGGTGATTTCATCGCCGAGGGTCTTGA TCAGACTCGTGGTTGGTTCTACACCCTGACTGTGCTGGGAACCCACCTGT TCGGCAAGCTCCCGTTCAAGAACTGCGTCGTCAACGGTATTGTTCTCGCA GAGGATGGAAAGAAGATGTCCAAGAGACTTAAGAACTACCCCGATCCCGC CCTCGTCATGGAGCGCTACGGTTCCGATGCTCTTCGCCTCTACTTGATCA ACTCCCCTGTTGTGCGCGCCGAGCCCCTTCGGTTCAAGGAGTCGGGCGTC AAGGAGATTGTCGCCAAGGTTCTCCTTCCTCTCTGGAACAGCTACAAGTT CTTCGAGGGTCAGGCCGCTCTGTTCAAGAAGACCCAGGGCTTTGATTATA CCTTTGACCCCAAGGCGGAGGCTACTAACACCAATGTCATGGACCGCTGG ATCCTGGCCAGTTGCCAGAGTCTTCTCAAGTTCGTCAACGAGGAGATGGC CGGATACCGCCTGTACACGGTCGTTCCCCGCCTGCTTGAATTGATTGACA ACACCACCAACTGGTACATTCGTTTCAACCGCAGACGTCTCAAGGGTGAG AACGGTGTCGATGATACCCAGCATGCCCTGAACACCCTCTTTGAGGTCCT GTACACTCTGGTCCGGGGCCTGGCTCCCTTCACTCCTTTCCTTACCGACA CCATCTACCTGAAGCTTCTCCCTCACATTCCCGAGGCGCTCCGTAGCGAG GACAGCCGCAGTGTCCACTTCCTTCCCTTCCCCGAGGTTCGGGAAGAGCT TTTCGATGAGGTCGTCGAGAGGCGCGTGGCCCGGATGCAGAAGGTCATTG ATATGGCTCGTATCTCCCGTGAACGTCGGAACATTGGTCTGAAGACGCCG CTGAAGACTCTCGTTGTCATTCACCAGGATCAGCAGTACCTGGACGATGT GAAGTCCCTGCAGGGATACATCCTCGAGGAGCTGAACGTTCTTGAGCTTG TCCTGTCCTCGGACGAGGAGAAGTACAACGTCCAGTACAGTGTGACCGCC GACTGGCCTACGTTGGGCAAGAAGCTTAAGAAGGAGGTCCAGAAGGTCAA GAAGGCCTTGCCCTCTCTCACCAGTGAGGACGTGAAGAAGTTCGTCGCCG ATAAGAAGATGCTTGTTGACGGCATTGAGCTTGTTGAAGGTGACCTGGTC GTGAAGCGTGGAATGAAGGAGGACAGCGCGTCCGCGAACATGGAACCCAA CACGGACAGCGACCTGCTGACCATCCTGGACGCTAACCTGTACCCCGAGT TGGCCGAGCAAGGGTTGGGCCGTGAGATCATCAACCGTCTGCAGCGTCTT CGTAAGAAGGCGGGTCTTGTCCCCACCGACGATGTGAAGATGGAGTATGC TGTCCTGTCGGATCCTGAGGATGTGGGCATTAGCAAGGCGTTTGAGACGC AAGCCAAGGCCATCGAAAAGGTTGTGCGCAGACCGCTCGACCGCTACGAG CTTGTGGACGGCAAGGTGCCCAACGGAGAGGAGCCGGGAATGATCATCCA GGAAGAGCAGGAAGTACAAAAGGCCACCTTCCTGTTGCGCTTGCTTAAGT TGTAGATGTCCATTGATTTTCCCCGCGAGGAGGAGGCCATCCTCCAGAGG TGGAGGGAGATCAACGCCTTCCGGAGGCAGGTTGAGCTCTCCGAAGGCCG TAAACCATACACCTTCTACGATGGCCCTCCGTTCGCTACTGGTCTGCCTC ACTATGGTCACTTATTGGCCTCGACCATTAAGGATATCATTCCCCGCTAT TGGTCCATGAAGGGTCACTATGTCGAGCGTCGCTTTGGCTGGGATACCCA TGGTGTGCCCATCGAGTACGAGATCGACAAGAAGCTGGGCATGTCGGGTC TCGAGGCCGTCGAGAAAATTGGTATTGAGAAGTATAACGAGGAGTGCAGA GCCATTGTCATGAGATTCGCTTCGGAATGGCGTCAAACTATCGAGAGACT GGGTCGTTGGATTGACTTTGACAATGACTACAAGACCATGAACGTGAGCT TCATGGAATCAGTGTGGTGGGTCTTCAAGCAGCTGTTCGACAAGGACCTT GTCTACAGAGGCTACCGCGTCATGCCTTACTCGACCGCCCTCAACACCCC CCTCAGTAACTTCGAGGCTCAACAAAACTACAAGGATGTGCAAGACCCCG CTGTCGTCGTCACATTCCCCCTCGTCCACGATCCCGAGACTTCCCTTCTT GCATGGACGACCACACCATGGACCTTGCCCTCGAACATTGCTCTGGCGGT CAACCCCACCTACGAATACATCAAGATCCTCGACGAGGCATCCGGAAAGC ACTACATTCTGCTCGAGTCTCTGCTCCGGACGCTGTACAAGGACCCCAAG AAGGCCAAGTTCAAGATTGTCGACCGCTTCAAGGGTGCTGCCATGAAAGA CTGGAAGTACCAGCCCCTCTTCGATTACTTCTACGAAGAGTTCAAGGAGC ACGGTTTCCGGGTCCTTAACGCCGAGTACGTTACTGCTGAGGACGGTACC GGTATTGTCCACCAGGCTCCTGCCTTTGGTGAGGACGATTACAGAGTTGG CATGGAGAATGGTGTCATCAGTGAGACCCGCCTCCCCCCTAACCCTGTTG ACGAAAAGGGTTGCTACACAGCCGAAGTGAGGGACTTCGAGGGCCAGCAT GTCAAGGCTGCCGACAGGGGCATCATCAAGCACCTGAAGGCTGCTGGACG CCTGGTTGTCGACAGCCAGATTACTCACAGCTACCCCTTCTGCTGGCGTT CCGACACTCCCTTGATCTACCGGGCCGTGCCGGCTTGGTTCGTCAAGATT GGCCCTATCATCCCTCAGATGCTTCAGGGCATTGACGACTCCCACTGGGT GCCGAGCTTTGTCAAGGAAAGACGCTTCTCCAGTTGGATCCAGAATGCTC GCGACTGGAACATCTCGAGAAACCGCTTCTGGGGTACTCCTCTGCCCTTG TGGGTGAGCGATGACTTCAAGGAGGTTGTCGCCGTTGGTAGTGCCGAGGA ACTCAAGCAGCTTAGTGGTTACGAAGGTGAACTCACCGACCTGCACCGCG ACAAGGTCGACAAGATCACCATCCCCAGCAAGCAGGGCAAGGGCGTCCTT CGCCGTGTCAGCGAGGTGTTTGATTGCTGGTTTGAGTCTGGCAGCATGCC CTACGCATCCCAGCACTACCCCTTTGAGAACAAGGAACAGTTCGAGAACA GCTTCCCCGGTGATTTCATCGCCGAGGGTCTTGATCAGACTCGTGGTTGG TTCTACACCCTGACTGTGCTGGGAACCCACCTGTTCGGCAAGCTCCCGTT CAAGAACTGCGTCGTCAACGGTATTGTTCTCGCAGAGGATGGAAAGAAGA TGTCCAAGAGACTTAAGAACTACCCCGATCCCGCCCTCGTCATGGAGCGC TACGGTTCCGATGCTCTTCGCCTCTACTTGATCAACTCCCCTGTTGTGCG CGCCGAGCCCCTTCGGTTCAAGGAGTCGGGCGTCAAGGAGATTGTCGCCA AGGTTCTCCTTCCTCTCTGGAACAGCTACAAGTTCTTCGAGGGTCAGGCC GCTCTGTTCAAGAAGACCCAGGGCTTTGATTATACCTTTGACCCCAAGGC GGAGGCTACTAACACCAATGTCATGGACCGCTGGATCCTGGCCAGTTGCC AGAGTCTTCTCAAGTTCGTCAACGAGGAGATGGCCGGATACCGCCTGTAC ACGGTCGTTCCCCGCCTGCTTGAATTGATTGACAACACCACCAACTGGTA CATTCGTTTCAACCGCAGACGTCTCAAGGGTGAGAACGGTGTCGATGATA CCCAGCATGCCCTGAACACCCTCTTTGAGGTCCTGTACACTCTGGTCCGG GGCCTGGCTCCCTTCACTCCTTTCCTTACCGACACCATCTACCTGAAGCT TCTCCCTCACATTCCCGAGGCGCTCCGTAGCGAGGACAGCCGCAGTGTCC ACTTCCTTCCCTTCCCCGAGGTTCGGGAAGAGCTTTTCGATGAGGTCGTC GAGAGGCGCGTGGCCCGGATGCAGAAGGTCATTGATATGGCTCGTATCTC CCGTGAACGTCGGAACATTGGTCTGAAGACGCCGCTGAAGACTCTCGTTG TCATTCACCAGGATCAGCAGTACCTGGACGATGTGAAGTCCCTGCAGGGA TACATCCTCGAGGAGCTGAACGTTCTTGAGCTTGTCCTGTCCTCGGACGA GGAGAAGTACAACGTCCAGTACAGTGTGACCGCCGACTGGCCTACGTTGG GCAAGAAGCTTAAGAAGGAGGTCCAGAAGGTCAAGAAGGCCTTGCCCTCT CTCACCAGTGAGGACGTGAAGAAGTTCGTCGCCGATAAGAAGATGCTTGT TGACGGCATTGAGCTTGTTGAAGGTGACCTGGTCGTGAAGCGTGGAATGA AGGAGGACAGCGCGTCCGCGAACATGGAACCCAACACGGACAGCGACCTG CTGACCATCCTGGACGCTAACCTGTACCCCGAGTTGGCCGAGCAAGGGTT GGGCCGTGAGATCATCAACCGTCTGCAGCGTCTTCGTAAGAAGGCGGGTC TTGTCCCCACCGACGATGTGAAGATGGAGTATGCTGTCCTGTCGGATCCT GAGGATGTGGGCATTAGCAAGGCGTTTGAGACGCAAGCCAAGGCCATCGA AAAGGTTGTGCGCAGACCGCTCGACCGCTACGAGCTTGTGGACGGCAAGG TGCCCAACGGAGAGGAGCCGGGAATGATCATCCAGGAAGAGCAGGAAGTA CAAAAGGCCACCTTCCTGTTGCGCTTGCTTAAGTTGTAGATGTCCATTGA TTTTCCCCGCGAGGAGGAGGCCATCCTCCAGAGGTGGAGGGAGATCAACG CCTTCCGGAGGCAGGTTGAGCTCTCCGAAGGCCGTAAACCATACACCTTC TACGATGGCCCTCCGTTCGCTACTGGTCTGCCTCACTATGGTCACTTATT GGCCTCGACCATTAAGGATATCATTCCCCGCTATTGGTCCATGAAGGGTC ACTATGTCGAGCGTCGCTTTGGCTGGGATACCCATGGTGTGCCCATCGAG TACGAGATCGACAAGAAGCTGGGCATGTCGGGTCTCGAGGCCGTCGAGAA AATTGGTATTGAGAAGTATAACGAGGAGTGCAGAGCCATTGTCATGAGAT TCGCTTCGGAATGGCGTCAAACTATCGAGAGACTGGGTCGTTGGATTGAC TTTGACAATGACTACAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006418 | tRNA aminoacylation for protein translation |
GO:0006428 | isoleucyl-tRNA aminoacylation |
Vocabulary: Molecular Function
Term | Definition |
GO:0000049 | tRNA binding |
GO:0002161 | aminoacyl-tRNA editing activity |
GO:0004812 | aminoacyl-tRNA ligase activity |
GO:0004822 | isoleucine-tRNA ligase activity |
GO:0000166 | nucleotide binding |
GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_012353-T1.utr5p1 | KJC3_012353-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG0926092K |
DBxref | InterPro:IPR009080 |
DBxref | InterPro:IPR033709 |
DBxref | InterPro:IPR023586 |
DBxref | InterPro:IPR001412 |
DBxref | InterPro:IPR014729 |
DBxref | InterPro:IPR009008 |
DBxref | InterPro:IPR013155 |
DBxref | InterPro:IPR002300 |
DBxref | InterPro:IPR002301 |
DBxref | PFAM:PF00133 |
DBxref | PFAM:PF08264 |
Product | cytoplasmic |
Product | Isoleucine--tRNA ligase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch8 | supercontig | ch8:3308969..3312343 - |
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