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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3359492..3360497+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012364-T1 ID=KJC3_012364-T1|Name=KJC3_012364-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1006bp|location=Sequence derived from alignment at ch8:3359492..3360497+ (Aspergillus niger KJC3)
ATGAACAACCACGCCCTCCTCATCCGCCGAATACAACCACTCCGGTCCCT
GCGACGTCAACCACCACGAAGACACCTCTCCTCCACCCCCCGCAACGCTG
AACCTCACCATAACCCCGTCCCTGAGAAACATCACACTCCCTCGAACAAC
CCACAGCCGGCTCCCACAGTGCCTGGCCCGGTCGCATCGACCACCGCCGC
CCCCGGGTCGGTATCCGCATCGCGAGCACTCATCCAGAGAATCCAGGCCG
GTCCGGTAGGACGAGTGGCGCGAGCGTATGCGCGCGTGCAGGAGAGACGA
CCCTACCGGACACAAGTGATCAGTACGATTGTGGTGTATCTGTGTGGTGA
TTTGGGGGCGCAGTTGTTGTTTCCGCCGGATAATGGTTCACCCCAGGATG
TGCAAGCAGGTGATCAGAAGCAAGAAGCAGGAAATAATGCCGGAGGAATT
GGAGGAGGGTATGATCCGTGGAGGACGGTGCGCCATTTAACAGTAGGAGT
GGGGAGTGCAATCCCGACGTATAAATGGTGAGTGTCGCAGTGTATGGTGG
GGATGTCTATGTGATGATGGCTAATACGAAGGGAGATTTAGGTTCATGTT
CCTGCACAACAACTTCAACTTCTCGTCCAAGTTCCTCTCTATCCTTACCA
AGGTCTGCGTGCAACAGGCGGTGTTCACTCCCGTGTTCAATACCTATTTC
TTTGGTCTGCAGTCGTTGATGACGGGCAAGTCGTTGGAGGAGACTTTTGA
ACGGCTCAAGGTCGCTTTGCCGACGAGTATCTCGAACAGCGTGAAGCTGT
GGCCGGCTGTCACGGCTTTCAGCTTCATGTATGTGGCGCCTCAATTCCGG
AGTATCTTTTCCGGAGTCATTGCTGTTGGGTGGCAGACGTATCTGAGCTG
GTTGAATCAGAAGGCGGCGCGCAAGGTCGAGGCGGAAAGATTGGCGTCGG
TGGAGGTGGGTGCTGGTGCTGATGCTGGGGTTGGTGCGGTCGCTATGAAG
GCATAA back to topCoding sequence (CDS) from alignment at ch8:3359492..3360497+ >KJC3_012364-T1 ID=KJC3_012364-T1|Name=KJC3_012364-T1|organism=Aspergillus niger KJC3|type=CDS|length=1884bp|location=Sequence derived from alignment at ch8:3359492..3360497+ (Aspergillus niger KJC3)
ATGAACAACCACGCCCTCCTCATCCGCCGAATACAACCACTCCGGTCCCT
GCGACGTCAACCACCACGAAGACACCTCTCCTCCACCCCCCGCAACGCTG
AACCTCACCATAACCCCGTCCCTGAGAAACATCACACTCCCTCGAACAAC
CCACAGCCGGCTCCCACAGTGCCTGGCCCGGTCGCATCGACCACCGCCGC
CCCCGGGTCGGTATCCGCATCGCGAGCACTCATCCAGAGAATCCAGGCCG
GTCCGGTAGGACGAGTGGCGCGAGCGTATGCGCGCGTGCAGGAGAGACGA
CCCTACCGGACACAAGTGATCAGTACGATTGTGGTGTATCTGTGTGGTGA
TTTGGGGGCGCAGTTGTTGTTTCCGCCGGATAATGGTTCACCCCAGGATG
TGCAAGCAGGTGATCAGAAGCAAGAAGCAGGAAATAATGCCGGAGGAATT
GGAGGAGGGTATGATCCGTGGAGGACGGTGCGCCATTTAACAGTAGGAGT
GGGGAGTGCAATCCCGACGTATAAATGGTTCATGTTCCTGCACAACAACT
TCAACTTCTCGTCCAAGTTCCTCTCTATCCTTACCAAGGTCTGCGTGCAA
CAGGCGGTGTTCACTCCCGTGTTCAATACCTATTTCTTTGGTCTGCAGTC
GTTGATGACGGGCAAGTCGTTGGAGGAGACTTTTGAACGGCTCAAGGTCG
CTTTGCCGACGAGTATCTCGAACAGCGTGAAGCTGTGGCCGGCTGTCACG
GCTTTCAGCTTCATGTATGTGGCGCCTCAATTCCGGAGTATCTTTTCCGG
AGTCATTGCTGTTGGGTGGCAGACGTATCTGAGCTGGTTGAATCAGAAGG
CGGCGCGCAAGGTCGAGGCGGAAAGATTGGCGTCGGTGGAGGTGGGTGCT
GGTGCTGATGCTGGGGTTGGTGCGGTCGCTATGAAGGCATAAATGAACAA
CCACGCCCTCCTCATCCGCCGAATACAACCACTCCGGTCCCTGCGACGTC
AACCACCACGAAGACACCTCTCCTCCACCCCCCGCAACGCTGAACCTCAC
CATAACCCCGTCCCTGAGAAACATCACACTCCCTCGAACAACCCACAGCC
GGCTCCCACAGTGCCTGGCCCGGTCGCATCGACCACCGCCGCCCCCGGGT
CGGTATCCGCATCGCGAGCACTCATCCAGAGAATCCAGGCCGGTCCGGTA
GGACGAGTGGCGCGAGCGTATGCGCGCGTGCAGGAGAGACGACCCTACCG
GACACAAGTGATCAGTACGATTGTGGTGTATCTGTGTGGTGATTTGGGGG
CGCAGTTGTTGTTTCCGCCGGATAATGGTTCACCCCAGGATGTGCAAGCA
GGTGATCAGAAGCAAGAAGCAGGAAATAATGCCGGAGGAATTGGAGGAGG
GTATGATCCGTGGAGGACGGTGCGCCATTTAACAGTAGGAGTGGGGAGTG
CAATCCCGACGTATAAATGGTTCATGTTCCTGCACAACAACTTCAACTTC
TCGTCCAAGTTCCTCTCTATCCTTACCAAGGTCTGCGTGCAACAGGCGGT
GTTCACTCCCGTGTTCAATACCTATTTCTTTGGTCTGCAGTCGTTGATGA
CGGGCAAGTCGTTGGAGGAGACTTTTGAACGGCTCAAGGTCGCTTTGCCG
ACGAGTATCTCGAACAGCGTGAAGCTGTGGCCGGCTGTCACGGCTTTCAG
CTTCATGTATGTGGCGCCTCAATTCCGGAGTATCTTTTCCGGAGTCATTG
CTGTTGGGTGGCAGACGTATCTGAGCTGGTTGAATCAGAAGGCGGCGCGC
AAGGTCGAGGCGGAAAGATTGGCGTCGGTGGAGGTGGGTGCTGGTGCTGA
TGCTGGGGTTGGTGCGGTCGCTATGAAGGCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007248 |
| DBxref | PFAM:PF04117 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3359492..3360497 + |
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