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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3388564..3390634+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012374-T1 ID=KJC3_012374-T1|Name=KJC3_012374-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2071bp|location=Sequence derived from alignment at ch8:3388564..3390634+ (Aspergillus niger KJC3)
CTCTCGTTCTTGTCTTTACTGACCCTAGTCTTTCGTTTCGCGTGGTCTGT
CGTGGTGTCGTATCAAATGATTATTATTATCTTCTAACCTATCCCTCTGC
CTATTTGCTATATATCCCCAAAACTGACCCATACATATCACATCTCTCCA
CCTTTGGTTACATATACATACATTCATACATACATATACACCTCTCATAC
AACAATGAAGGCCACTAGCGCAACGGTGGCTTTCCTAGCCATTGCTGCTG
TCCAAGCAGCCAAGCACGCCCATGACCATGGCCACCACCGTAGCCATCGC
TCGGTGGATAGCCCCGTGGTCAAGAAGAGTTCCTCGTGTCAGTTCCCCTC
CGGGGCTGGCTTGATCCCCATCACTCCCCACGAGACCAATGGTGGTTGGG
CGATGAGCCCTGATCAGGAGTGCAAGCCTGGCGGATATTGTCCGTATGCT
TGTCCAGCCGGCCAGGTCTCCATGCAGTGGGACCCGGAGGCTACTTCGTA
CACCTACCCCATGTCCATGGTAAGTGCTTCTCCTGGGAGAAATCTGTGAC
TCGCGACTGATGAGATAGAATGGTGGACTGTACTGCGACGAGAATGGCGA
AATACAGAAGCCATTCCCGGACCGTCCCTACTGCAAGGACGGCACAGGCG
TCGTCAGCGCGAAGAACAAGTGCAAGGAGCAGGTGTCTTTCTGCCAGACT
GTTCTTCCGGGCAATGAAGCCATGCTGATCCCCACGCTTGTGGAAGAGCT
GGCTACCCTGGCTGTTCCGGATCTGAGTTACTGGTGTGAGACTGCGGCGC
AGTATGTTCTCTATTGCTCTTTTTTTTTTGGTGAGAGGACATGATACTGA
CAGTACTAGCTTCTATATCAACCCTCCGGGATACAACACCGAGACTGCCT
GTGTCTGGGGTACCTCTGAGAACCCCTACGGCAACTGGTCCCCGTATGTT
GCCGGTGCCAACACTGACGGCGACGGCAACACCTATGTGAAGCTCGGATG
GAACCCGATTTACCTAGAACCGACTACCCCGTTCCGCAACGAAGTCCCTG
AGTTCGGTGTCGAGATCGAGTGTGAGGGAGACGGCTGCAATGGACTGCCA
TGCAAGATCGACCCATCCGTGAACGGCGTGAACGAGATGACTGGCGACAG
CTCAGTGGGTGCAGGCGGTGCATCCTTCTGTGTGGTGACGGTGCCCAAGG
GCGGAAAGGCCAATGTCGTTGTCTTCGACAAGGACGGCGGTGACTCTACC
AGCGTGCCGGTGTCCAGCAGCAGTGTTAGCAGCGTCGTCGTGAGCAGCAG
CGCCAGCACCAGCAGCACCTCGACCAGCAGCATCGTCCCTACTACGAGCA
GCACGCCGACGAGTGTCAGCACCAGCACCAGCACCAGCACCAGCACTAGC
ACCAGCACTAGCACTAGCACTAGCAGCAGCACCCCGACCCCGACGCCGTC
CAGCACTACTACTACTATCTCCAGCACCACTCTCAGCTCCAGCTCCACCA
TCAGCACCACCAGCTCCAGCAGCATAACTCCCCGGCCCACCCCCAGCTGG
ACGCCCTCTTCCAGCTGGAAGATCAGCTCGAGCGCAGCACTGAACTGGAC
CGTGTCGGCTAGCTACACGTACAAGCCACACGTGATGGTGGAGACGGGCT
CCTCGCACACGCAGCCTGTAGCTGCTGCTGCTGTTGCCAGTGAGGGCTCG
AGCCAGACGACTGGAACCGCTCAAGCAACGCAGTCAGCGGTTGTGACGGA
GGGAGCTGCTGTCAGCACTGCCGTGTCGAAGCTGAGTCTGATTGTGGCAG
TTCTTGGAGCCATTGTCATGGTCTAGACAATAGACCATGTTGACCATCAT
ACCGATCAACTGTGTCGGTTGCATACTCACTCACCATCATCACTTTTCTT
GGTTCACTTCTGATGGGCACCTTTTTCACACTTACACTTATACCCTTATG
ATTGACGTTCTTGTATATGCTTGATTGATGAGCATTTATCGATAATGTTT
ACTGTTAATATAGTCATTAATTTCCTGTAAATTCCAAGTGCCACTTAGCA
CAGAGTAGAGGTCGAACAGTC back to topCoding sequence (CDS) from alignment at ch8:3388564..3390634+ >KJC3_012374-T1 ID=KJC3_012374-T1|Name=KJC3_012374-T1|organism=Aspergillus niger KJC3|type=CDS|length=4545bp|location=Sequence derived from alignment at ch8:3388564..3390634+ (Aspergillus niger KJC3)
ATGAAGGCCACTAGCGCAACGGTGGCTTTCCTAGCCATTGCTGCTGTCCA
AGCAGCCAAGCACGCCCATGACCATGGCCACCACCGTAGCCATCGCTCGG
TGGATAGCCCCGTGGTCAAGAAGAGTTCCTCGTGTCAGTTCCCCTCCGGG
GCTGGCTTGATCCCCATCACTCCCCACGAGACCAATGGTGGTTGGGCGAT
GAGCCCTGATCAGGAGTGCAAGCCTGGCGGATATTGTCCGTATGCTTGTC
CAGCCGGCCAGGTCTCCATGCAGTGGGACCCGGAGGCTACTTCGTACACC
TACCCCATGTCCATGAATGGTGGACTGTACTGCGACGAGAATGGCGAAAT
ACAGAAGCCATTCCCGGACCGTCCCTACTGCAAGGACGGCACAGGCGTCG
TCAGCGCGAAGAACAAGTGCAAGGAGCAGGTGTCTTTCTGCCAGACTGTT
CTTCCGGGCAATGAAGCCATGCTGATCCCCACGCTTGTGGAAGAGCTGGC
TACCCTGGCTGTTCCGGATCTGAGTTACTGGTGTGAGACTGCGGCGCACT
TCTATATCAACCCTCCGGGATACAACACCGAGACTGCCTGTGTCTGGGGT
ACCTCTGAGAACCCCTACGGCAACTGGTCCCCGTATGTTGCCGGTGCCAA
CACTGACGGCGACGGCAACACCTATGTGAAGCTCGGATGGAACCCGATTT
ACCTAGAACCGACTACCCCGTTCCGCAACGAAGTCCCTGAGTTCGGTGTC
GAGATCGAGTGTGAGGGAGACGGCTGCAATGGACTGCCATGCAAGATCGA
CCCATCCGTGAACGGCGTGAACGAGATGACTGGCGACAGCTCAGTGGGTG
CAGGCGGTGCATCCTTCTGTGTGGTGACGGTGCCCAAGGGCGGAAAGGCC
AATGTCGTTGTCTTCGACAAGGACGGCGGTGACTCTACCAGCGTGCCGGT
GTCCAGCAGCAGTGTTAGCAGCGTCGTCGTGAGCAGCAGCGCCAGCACCA
GCAGCACCTCGACCAGCAGCATCGTCCCTACTACGAGCAGCACGCCGACG
AGTGTCAGCACCAGCACCAGCACCAGCACCAGCACTAGCACCAGCACTAG
CACTAGCACTAGCAGCAGCACCCCGACCCCGACGCCGTCCAGCACTACTA
CTACTATCTCCAGCACCACTCTCAGCTCCAGCTCCACCATCAGCACCACC
AGCTCCAGCAGCATAACTCCCCGGCCCACCCCCAGCTGGACGCCCTCTTC
CAGCTGGAAGATCAGCTCGAGCGCAGCACTGAACTGGACCGTGTCGGCTA
GCTACACGTACAAGCCACACGTGATGGTGGAGACGGGCTCCTCGCACACG
CAGCCTGTAGCTGCTGCTGCTGTTGCCAGTGAGGGCTCGAGCCAGACGAC
TGGAACCGCTCAAGCAACGCAGTCAGCGGTTGTGACGGAGGGAGCTGCTG
TCAGCACTGCCGTGTCGAAGCTGAGTCTGATTGTGGCAGTTCTTGGAGCC
ATTGTCATGGTCTAGATGAAGGCCACTAGCGCAACGGTGGCTTTCCTAGC
CATTGCTGCTGTCCAAGCAGCCAAGCACGCCCATGACCATGGCCACCACC
GTAGCCATCGCTCGGTGGATAGCCCCGTGGTCAAGAAGAGTTCCTCGTGT
CAGTTCCCCTCCGGGGCTGGCTTGATCCCCATCACTCCCCACGAGACCAA
TGGTGGTTGGGCGATGAGCCCTGATCAGGAGTGCAAGCCTGGCGGATATT
GTCCGTATGCTTGTCCAGCCGGCCAGGTCTCCATGCAGTGGGACCCGGAG
GCTACTTCGTACACCTACCCCATGTCCATGAATGGTGGACTGTACTGCGA
CGAGAATGGCGAAATACAGAAGCCATTCCCGGACCGTCCCTACTGCAAGG
ACGGCACAGGCGTCGTCAGCGCGAAGAACAAGTGCAAGGAGCAGGTGTCT
TTCTGCCAGACTGTTCTTCCGGGCAATGAAGCCATGCTGATCCCCACGCT
TGTGGAAGAGCTGGCTACCCTGGCTGTTCCGGATCTGAGTTACTGGTGTG
AGACTGCGGCGCACTTCTATATCAACCCTCCGGGATACAACACCGAGACT
GCCTGTGTCTGGGGTACCTCTGAGAACCCCTACGGCAACTGGTCCCCGTA
TGTTGCCGGTGCCAACACTGACGGCGACGGCAACACCTATGTGAAGCTCG
GATGGAACCCGATTTACCTAGAACCGACTACCCCGTTCCGCAACGAAGTC
CCTGAGTTCGGTGTCGAGATCGAGTGTGAGGGAGACGGCTGCAATGGACT
GCCATGCAAGATCGACCCATCCGTGAACGGCGTGAACGAGATGACTGGCG
ACAGCTCAGTGGGTGCAGGCGGTGCATCCTTCTGTGTGGTGACGGTGCCC
AAGGGCGGAAAGGCCAATGTCGTTGTCTTCGACAAGGACGGCGGTGACTC
TACCAGCGTGCCGGTGTCCAGCAGCAGTGTTAGCAGCGTCGTCGTGAGCA
GCAGCGCCAGCACCAGCAGCACCTCGACCAGCAGCATCGTCCCTACTACG
AGCAGCACGCCGACGAGTGTCAGCACCAGCACCAGCACCAGCACCAGCAC
TAGCACCAGCACTAGCACTAGCACTAGCAGCAGCACCCCGACCCCGACGC
CGTCCAGCACTACTACTACTATCTCCAGCACCACTCTCAGCTCCAGCTCC
ACCATCAGCACCACCAGCTCCAGCAGCATAACTCCCCGGCCCACCCCCAG
CTGGACGCCCTCTTCCAGCTGGAAGATCAGCTCGAGCGCAGCACTGAACT
GGACCGTGTCGGCTAGCTACACGTACAAGCCACACGTGATGGTGGAGACG
GGCTCCTCGCACACGCAGCCTGTAGCTGCTGCTGCTGTTGCCAGTGAGGG
CTCGAGCCAGACGACTGGAACCGCTCAAGCAACGCAGTCAGCGGTTGTGA
CGGAGGGAGCTGCTGTCAGCACTGCCGTGTCGAAGCTGAGTCTGATTGTG
GCAGTTCTTGGAGCCATTGTCATGGTCTAGATGAAGGCCACTAGCGCAAC
GGTGGCTTTCCTAGCCATTGCTGCTGTCCAAGCAGCCAAGCACGCCCATG
ACCATGGCCACCACCGTAGCCATCGCTCGGTGGATAGCCCCGTGGTCAAG
AAGAGTTCCTCGTGTCAGTTCCCCTCCGGGGCTGGCTTGATCCCCATCAC
TCCCCACGAGACCAATGGTGGTTGGGCGATGAGCCCTGATCAGGAGTGCA
AGCCTGGCGGATATTGTCCGTATGCTTGTCCAGCCGGCCAGGTCTCCATG
CAGTGGGACCCGGAGGCTACTTCGTACACCTACCCCATGTCCATGAATGG
TGGACTGTACTGCGACGAGAATGGCGAAATACAGAAGCCATTCCCGGACC
GTCCCTACTGCAAGGACGGCACAGGCGTCGTCAGCGCGAAGAACAAGTGC
AAGGAGCAGGTGTCTTTCTGCCAGACTGTTCTTCCGGGCAATGAAGCCAT
GCTGATCCCCACGCTTGTGGAAGAGCTGGCTACCCTGGCTGTTCCGGATC
TGAGTTACTGGTGTGAGACTGCGGCGCACTTCTATATCAACCCTCCGGGA
TACAACACCGAGACTGCCTGTGTCTGGGGTACCTCTGAGAACCCCTACGG
CAACTGGTCCCCGTATGTTGCCGGTGCCAACACTGACGGCGACGGCAACA
CCTATGTGAAGCTCGGATGGAACCCGATTTACCTAGAACCGACTACCCCG
TTCCGCAACGAAGTCCCTGAGTTCGGTGTCGAGATCGAGTGTGAGGGAGA
CGGCTGCAATGGACTGCCATGCAAGATCGACCCATCCGTGAACGGCGTGA
ACGAGATGACTGGCGACAGCTCAGTGGGTGCAGGCGGTGCATCCTTCTGT
GTGGTGACGGTGCCCAAGGGCGGAAAGGCCAATGTCGTTGTCTTCGACAA
GGACGGCGGTGACTCTACCAGCGTGCCGGTGTCCAGCAGCAGTGTTAGCA
GCGTCGTCGTGAGCAGCAGCGCCAGCACCAGCAGCACCTCGACCAGCAGC
ATCGTCCCTACTACGAGCAGCACGCCGACGAGTGTCAGCACCAGCACCAG
CACCAGCACCAGCACTAGCACCAGCACTAGCACTAGCACTAGCAGCAGCA
CCCCGACCCCGACGCCGTCCAGCACTACTACTACTATCTCCAGCACCACT
CTCAGCTCCAGCTCCACCATCAGCACCACCAGCTCCAGCAGCATAACTCC
CCGGCCCACCCCCAGCTGGACGCCCTCTTCCAGCTGGAAGATCAGCTCGA
GCGCAGCACTGAACTGGACCGTGTCGGCTAGCTACACGTACAAGCCACAC
GTGATGGTGGAGACGGGCTCCTCGCACACGCAGCCTGTAGCTGCTGCTGC
TGTTGCCAGTGAGGGCTCGAGCCAGACGACTGGAACCGCTCAAGCAACGC
AGTCAGCGGTTGTGACGGAGGGAGCTGCTGTCAGCACTGCCGTGTCGAAG
CTGAGTCTGATTGTGGCAGTTCTTGGAGCCATTGTCATGGTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012374-T1.utr5p1 | KJC3_012374-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012374-T1.utr3p1 | KJC3_012374-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:GH132 |
| DBxref | InterPro:IPR005556 |
| DBxref | PFAM:PF03856 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3388564..3390634 + |
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