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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3390831..3392234+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012375-T1 ID=KJC3_012375-T1|Name=KJC3_012375-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1404bp|location=Sequence derived from alignment at ch8:3390831..3392234+ (Aspergillus niger KJC3)
CACTGCCTAACATCATCATCGTCATCTCCTCACCACCTCTCCCACCACCT
CTTAACTCCCACTCACTCCCACAGAGAACCAGCACAACACAACCAAGATG
CCTCCCTCACCACAAACAGTAAGCTCTCCATCCCTCCCATCCCTTCCACC
CTCACCCCTCAATCCACCACCCTCACCAACCCCCTTCCCCTCCCCTCCTC
CCCCCCGCACCCCTCCAACCACACCCCCCAAACTAACCACCCTTCCCTCC
CAACCCATCAGGCAAAACTAACCAGTACCCTCCACCTCCTAATCCCACGC
CTCCGCCTCCTCCAAAAGAAAGACACCGCCAGCTCCGTCGTCCAACGACG
GGACCTCTCCACCCTACTATCGGAGAACCGGTCGACGAGCGCGCGCATCC
GCGTCGAGAATGTAATCGCGACCGACACCGCCGTGGAAGTCATGGAGATG
GTAGAACTATACTGCGAACTGCTTCTCGCGCGCGCGAATCTCCTCGATCA
ATCAGCCTTCGGGGAGAAAGGCGCGCGCGCGAGAAGTAGAGCCAGGGAGG
AAGCCCAGAGACAACAACAACAACAACATGCCTCGACCACTGCGTCATCA
TCATCTGCTGCAGGGAAAAGTTCCTCCGGGTCGGGGTTCTCGTTCTGGGG
ATTCGGTGGTCGGAAACAGACACATCATGATCCGCGACCAGAACCGGAAG
TACCAGGTGGGGAAGTAGGAGGGGAAAAAGAAGGCTACATTGATCCGGCG
CTCGATGAGGCCGCGGCGGTGATATTCTACTCGTATGCGCGGTTCCCGCA
TGATGTTCGGGAGATGACTATCCTGCGGGGATTGCTTACGGATAGATGGG
GGAAGGATTTTATGATGCTGGCGCAGGAGAATAAGTTGGAGGATGTGAAG
GTTCCGGAACGGTTGGTTAGAGGGTTACGTGTGAAGCCGCCGTCGGAGGA
GTTGGTGGAGAGTTATCTTGTGGAGATTGCGAGGGCGTATGGGGTTACTT
GGCCTGATGGGTCTCATGATGCGCCGGAGGGGGATGTGCCGAGTTTTGTT
GATGAGGGGGCGGGAGGGGATGAAGGGGATGATGGTGGGGAGGATGATGA
GGGGGATATGAAGTTGCCGTCTACCCCGAGGAAGATTGGCCAGTCTGGTG
ATAGTGAGGAGGCGCGACGGGCATCCGAGACGCTGGAGTTGAATAAGGCG
ACGCCGCCGCGGGGGCTATATTCTGAGGGAAAGAGTCCGGTGAGTGTGGC
ACCGCCGGGGCCCAGGGTGGATAATTTGCATCCGAAGGTGAAGGTGCCCG
GGGAGGAAGATGTGTCTAAAGAGGCCAGCAAGTCGAAGCCGGCGAAGAGT
GACATACCCGAGTTGGATGAGTTGACGAGACGGTTTGCGGCGTTGAGACG
GTGA back to topCoding sequence (CDS) from alignment at ch8:3390831..3392234+ >KJC3_012375-T1 ID=KJC3_012375-T1|Name=KJC3_012375-T1|organism=Aspergillus niger KJC3|type=CDS|length=2328bp|location=Sequence derived from alignment at ch8:3390831..3392234+ (Aspergillus niger KJC3)
ATGCCTCCCTCACCACAAACAGCAAAACTAACCAGTACCCTCCACCTCCT
AATCCCACGCCTCCGCCTCCTCCAAAAGAAAGACACCGCCAGCTCCGTCG
TCCAACGACGGGACCTCTCCACCCTACTATCGGAGAACCGGTCGACGAGC
GCGCGCATCCGCGTCGAGAATGTAATCGCGACCGACACCGCCGTGGAAGT
CATGGAGATGGTAGAACTATACTGCGAACTGCTTCTCGCGCGCGCGAATC
TCCTCGATCAATCAGCCTTCGGGGAGAAAGGCGCGCGCGCGAGAAGTAGA
GCCAGGGAGGAAGCCCAGAGACAACAACAACAACAACATGCCTCGACCAC
TGCGTCATCATCATCTGCTGCAGGGAAAAGTTCCTCCGGGTCGGGGTTCT
CGTTCTGGGGATTCGGTGGTCGGAAACAGACACATCATGATCCGCGACCA
GAACCGGAAGTACCAGGTGGGGAAGTAGGAGGGGAAAAAGAAGGCTACAT
TGATCCGGCGCTCGATGAGGCCGCGGCGGTGATATTCTACTCGTATGCGC
GGTTCCCGCATGATGTTCGGGAGATGACTATCCTGCGGGGATTGCTTACG
GATAGATGGGGGAAGGATTTTATGATGCTGGCGCAGGAGAATAAGTTGGA
GGATGTGAAGGTTCCGGAACGGTTGGTTAGAGGGTTACGTGTGAAGCCGC
CGTCGGAGGAGTTGGTGGAGAGTTATCTTGTGGAGATTGCGAGGGCGTAT
GGGGTTACTTGGCCTGATGGGTCTCATGATGCGCCGGAGGGGGATGTGCC
GAGTTTTGTTGATGAGGGGGCGGGAGGGGATGAAGGGGATGATGGTGGGG
AGGATGATGAGGGGGATATGAAGTTGCCGTCTACCCCGAGGAAGATTGGC
CAGTCTGGTGATAGTGAGGAGGCGCGACGGGCATCCGAGACGCTGGAGTT
GAATAAGGCGACGCCGCCGCGGGGGCTATATTCTGAGGGAAAGAGTCCGG
TGAGTGTGGCACCGCCGGGGCCCAGGGTGGATAATTTGCATCCGAAGGTG
AAGGTGCCCGGGGAGGAAGATGTGTCTAAAGAGGCCAGCAAGTCGAAGCC
GGCGAAGAGTGACATACCCGAGTTGGATGAGTTGACGAGACGGTTTGCGG
CGTTGAGACGGTGAATGCCTCCCTCACCACAAACAGCAAAACTAACCAGT
ACCCTCCACCTCCTAATCCCACGCCTCCGCCTCCTCCAAAAGAAAGACAC
CGCCAGCTCCGTCGTCCAACGACGGGACCTCTCCACCCTACTATCGGAGA
ACCGGTCGACGAGCGCGCGCATCCGCGTCGAGAATGTAATCGCGACCGAC
ACCGCCGTGGAAGTCATGGAGATGGTAGAACTATACTGCGAACTGCTTCT
CGCGCGCGCGAATCTCCTCGATCAATCAGCCTTCGGGGAGAAAGGCGCGC
GCGCGAGAAGTAGAGCCAGGGAGGAAGCCCAGAGACAACAACAACAACAA
CATGCCTCGACCACTGCGTCATCATCATCTGCTGCAGGGAAAAGTTCCTC
CGGGTCGGGGTTCTCGTTCTGGGGATTCGGTGGTCGGAAACAGACACATC
ATGATCCGCGACCAGAACCGGAAGTACCAGGTGGGGAAGTAGGAGGGGAA
AAAGAAGGCTACATTGATCCGGCGCTCGATGAGGCCGCGGCGGTGATATT
CTACTCGTATGCGCGGTTCCCGCATGATGTTCGGGAGATGACTATCCTGC
GGGGATTGCTTACGGATAGATGGGGGAAGGATTTTATGATGCTGGCGCAG
GAGAATAAGTTGGAGGATGTGAAGGTTCCGGAACGGTTGGTTAGAGGGTT
ACGTGTGAAGCCGCCGTCGGAGGAGTTGGTGGAGAGTTATCTTGTGGAGA
TTGCGAGGGCGTATGGGGTTACTTGGCCTGATGGGTCTCATGATGCGCCG
GAGGGGGATGTGCCGAGTTTTGTTGATGAGGGGGCGGGAGGGGATGAAGG
GGATGATGGTGGGGAGGATGATGAGGGGGATATGAAGTTGCCGTCTACCC
CGAGGAAGATTGGCCAGTCTGGTGATAGTGAGGAGGCGCGACGGGCATCC
GAGACGCTGGAGTTGAATAAGGCGACGCCGCCGCGGGGGCTATATTCTGA
GGGAAAGAGTCCGGTGAGTGTGGCACCGCCGGGGCCCAGGGTGGATAATT
TGCATCCGAAGGTGAAGGTGCCCGGGGAGGAAGATGTGTCTAAAGAGGCC
AGCAAGTCGAAGCCGGCGAAGAGTGACATACCCGAGTTGGATGAGTTGAC
GAGACGGTTTGCGGCGTTGAGACGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015031 | protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012375-T1.utr5p1 | KJC3_012375-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264PK5 |
| DBxref | InterPro:IPR042277 |
| DBxref | InterPro:IPR005061 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3390831..3392234 + |
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