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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3391905..3395159- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012376-T1 ID=KJC3_012376-T1|Name=KJC3_012376-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3255bp|location=Sequence derived from alignment at ch8:3391905..3395159- (Aspergillus niger KJC3)
GCGTATACTTCATTAATTTTCCATTCAGTAACAATCAGTTGTTCAGTACA
TCCGACAGTAAGTAAAGTAATTCCCAGTTCTTACTGAGTACGGCAGTTCT
CCTGATGGTCTTGACTGACTTTGACTGACTTTCTCTCCGTCTCTTCACGA
TCTTCTCTGCCTTTTCCCCTCCATTCCTTTCTTCCTCTCTCTCTCTCTTT
CTTTTCTTACTGCTGCTTCTCCAGTCTCTCATTCTCTCTTCTTCTCTTTT
CGTGGATCCGATCTGACCTGACCGAAACCCAACCACCAAGCAAGCCCCGG
TCCGGCCCCTCCCTTCCTTCTAGTAGTTCAGTTGTTTCTCCTCCAGTACC
GTGGGCTGCCCTATCATCATTCGCCGCCCGCCCCCAAAAGGTAACTCTCC
AATGCCTGCGCCAAAATCCGGCTCTCAAGGAACCGCCGGGCGTCCGTCCT
TACCCTCTTTATCGCTCTCCTCCACCACCCCTTCCTCGGCCATCTCTACT
CCAGCGGCCACTCCCAACCCCCTCTCGGCCACCTCTTCCTCCTTCGCCCA
ATCCTCCAAGAGCCGGAATGCTCGTCATACCCGAGCTACTTCCTGGACAT
CCGGTCACGATCAAGGCGGCGAACCCGACCCCGCGGACTTTACCTCTTCT
CAACAACGTCGTCGCAGAGAATCCAACATCTCATTAGCCGACGTCTCTGA
GGGCTCTTCCGGCCGCTACGACGACGATTCCGACGACCATCGCTCGCACG
CCGACATGGCCATGAGAAACACCTCCTTCGACTGGGGTCCTGGACACGCT
CGCAGCCGCTCCCATTCCTACAGCCAGCCACAAATGTCGCTCTTACAACC
TCAAGAACTGGCCGACTCGTCGGCTCCCCGGCCTCGTCCAGCACCGGTAA
CATGGATGTCCCTTCCGCGCAAAGGGCAGCTGGCTCTCTTGGGTCTCTGC
CGTGTCTTCGACTTCCTTCAGATTGCCTCCCTGCAGGCGTACATGTTCTA
CCAACTGAAATCCTTCGATGAGAACCTCTCCGACGCCGATGTCTCCACCC
AGGCCGGTATCCTCCAGGGTGCCTTTACCGCCGCGCAGTTTGCGACAGCC
ATCCCTTGGGGCCGTGTCGCCGATGCAGAATGGGGTGGTCGGAAATTCGT
CTTGCTGGTTGGTCTTATCGGTACCGCACTGTCCTGTCTGGGTGTTGCCT
ATTCGACGTCTTTCGCGCAGGCCGTGTTCTGGCGTTCGTTTGGCGGTGCC
ATCAACGGAACAGTCGGTATTATTCGGACCATGATTGCGGAGAATGTCAA
GGAGAAGAAATACCACTCGCGCGCGTTCCTGATTTTGCCTATCGGGTTTA
ATGTCGCTGCGCTGTTCGGACCGGGTAGGTACATCTTCCGTGATGTATGT
GGCTACAAGCTAACGGTTTAGTGATGGGTGGTATGCTGGCTGATCCGGTC
AAGGCTTATCCTCGACTCTTCGGTCCTGACTCTTCTTTTGGAGGCGCCGA
CGGTGTGCAGTGGCTTATTCGCTACCCGTATGCGCTGCCCATGCTGGCGA
ATGCCATTTTCCTGACGTTTGCTGCGGTCTGTGTCGCCATCGGTCTCGAA
GAGGTAAGTCATTTTGCTAATGTCGGCTATGCGCACTGCTAATGGGTGTT
GTAGACTCTGGAAGCTTGCAAGGGCAAGCCCGGTCTGGGCGTGTTCTCGA
TGCGCATCTTTGCTCGCGGCATTCGGGCAGTGGTTCCCTCGAACTCTCCA
TTGTACCAGAGGCTGCCGTTCGCGGACTACGACGAGGCTGGTCCTCTGCT
GAACCGCAGAGACCCGGCCGAAAGTTACGAGATGGAAGAGAAGGCGACCA
AGACAAGCCGCCAGGCTCGCACCTTGCCTTTCCGCCGGATCTGGACCAAG
AACGTGCTGTGCACGCTGTTGGCGCAGGCGTTCTTCGACTTTCAGATGGG
TGCTTTCAACAACCTCTGGCTGCTTTTCCTCTCTACTCCGCGTTATGATG
CCAACGACCCGGCCAGCCCGGTCCAGAGACTGCCCTTCATCTTCACTGGC
GGTTTGGGTATGCTGCCGCAAAGTGTTGGTTTCGCTACTGCCATTCTCGG
CGTGATTGGAATGCTCCTCCAGTTCACCATCTACCCCAGTATCAACAACC
GTCTGGGTACGGCCAAGAGTTACCAGTACTTCTTGACCCTCTTCCCTCTG
GCGTATGCATTCGCGCCGTACATTGCTCTTGCTCCGTCGTCCGCACCCCC
GCCGGGCCAGGCAAACGGCGGATGGGTGTGGTTCTCCATTATTGTGGTCT
TGTTCCTGCAAGTGACCGCACGAACCTTTACTCTTCCCACCTCCATCATC
CTTCTAAACAACTGCTCTCCGCACCCGTCCGTGCTCGGCACCATCCACGG
CATCGGCCAGTCTGTGTCCTCGGCGTTCCGTACCATTGGACCGATCTTTT
CCGGATCATGGTACGGCTACGGTCTGGAGATGGGCATGGTCGGATTTGCC
TGGTGGCTGATTGCATTGGTGTCGGTATTTGGCTGTGTCGCAGCCATTTT
TGTCTACGAGGGTTCCGGACATGAAGTCTTCCTTCCAGGCGAGGAAGAAG
AGCGGGACTAAATAATCTTGCTTGTTTTTATTTTCATCTCATACTTCACT
GCACAGGCGTTTGAATTGCTTCTTGTACATATATATAATGGACCCATTGC
ATAGCGGTGTCCGGACGTGTGCTTTGGATTGTTACTGGTTTCTGGGATTG
TGAGCGGTTGCTGTTGACATATTATACCTGCTGTTACATTATGCATTGGA
TGACAAAAGAGAGAACAGAGAGGATAGATAGATGGATGCATGCATCTAAT
AGAAGTTGCTTTGCTCGTGCTGAAATCTCATAACCGTCGTAAGTATGGAT
GTAGAGTGATTGTGCATGTCACCTGTCACCGTCTCAACGCCGCAAACCGT
CTCGTCAACTCATCCAACTCGGGTATGTCACTCTTCGCCGGCTTCGACTT
GCTGGCCTCTTTAGACACATCTTCCTCCCCGGGCACCTTCACCTTCGGAT
GCAAATTATCCACCCTGGGCCCCGGCGGTGCCACACTCACCGGACTCTTT
CCCTCAGAATATAGCCCCCGCGGCGGCGTCGCCTTATTCAACTCCAGCGT
CTCGGATGCCCGTCGCGCCTCCTCACTATCACCAGACTGGCCAATCTTCC
TCGGGGTAGACGGCAACTTCATATCCCCCTCATCATCCTCCCCACCATCA
TCCCC back to topCoding sequence (CDS) from alignment at ch8:3391905..3395159- >KJC3_012376-T1 ID=KJC3_012376-T1|Name=KJC3_012376-T1|organism=Aspergillus niger KJC3|type=CDS|length=6336bp|location=Sequence derived from alignment at ch8:3391905..3395159- (Aspergillus niger KJC3)
ACTCTGGAAGCTTGCAAGGGCAAGCCCGGTCTGGGCGTGTTCTCGATGCG
CATCTTTGCTCGCGGCATTCGGGCAGTGGTTCCCTCGAACTCTCCATTGT
ACCAGAGGCTGCCGTTCGCGGACTACGACGAGGCTGGTCCTCTGCTGAAC
CGCAGAGACCCGGCCGAAAGTTACGAGATGGAAGAGAAGGCGACCAAGAC
AAGCCGCCAGGCTCGCACCTTGCCTTTCCGCCGGATCTGGACCAAGAACG
TGCTGTGCACGCTGTTGGCGCAGGCGTTCTTCGACTTTCAGATGGGTGCT
TTCAACAACCTCTGGCTGCTTTTCCTCTCTACTCCGCGTTATGATGCCAA
CGACCCGGCCAGCCCGGTCCAGAGACTGCCCTTCATCTTCACTGGCGGTT
TGGGTATGCTGCCGCAAAGTGTTGGTTTCGCTACTGCCATTCTCGGCGTG
ATTGGAATGCTCCTCCAGTTCACCATCTACCCCAGTATCAACAACCGTCT
GGGTACGGCCAAGAGTTACCAGTACTTCTTGACCCTCTTCCCTCTGGCGT
ATGCATTCGCGCCGTACATTGCTCTTGCTCCGTCGTCCGCACCCCCGCCG
GGCCAGGCAAACGGCGGATGGGTGTGGTTCTCCATTATTGTGGTCTTGTT
CCTGCAAGTGACCGCACGAACCTTTACTCTTCCCACCTCCATCATCCTTC
TAAACAACTGCTCTCCGCACCCGTCCGTGCTCGGCACCATCCACGGCATC
GGCCAGTCTGTGTCCTCGGCGTTCCGTACCATTGGACCGATCTTTTCCGG
ATCATGGTACGGCTACGGTCTGGAGATGGGCATGGTCGGATTTGCCTGGT
GGCTGATTGCATTGGTGTCGGTATTTGGCTGTGTCGCAGCCATTTTTGTC
TACGAGGGTTCCGGACATGAAGTCTTCCTTCCAGGCGAGGAAGAAGAGCG
GGACTAATGATGGGTGGTATGCTGGCTGATCCGGTCAAGGCTTATCCTCG
ACTCTTCGGTCCTGACTCTTCTTTTGGAGGCGCCGACGGTGTGCAGTGGC
TTATTCGCTACCCGTATGCGCTGCCCATGCTGGCGAATGCCATTTTCCTG
ACGTTTGCTGCGGTCTGTGTCGCCATCGGTCTCGAAGAGATGCCTGCGCC
AAAATCCGGCTCTCAAGGAACCGCCGGGCGTCCGTCCTTACCCTCTTTAT
CGCTCTCCTCCACCACCCCTTCCTCGGCCATCTCTACTCCAGCGGCCACT
CCCAACCCCCTCTCGGCCACCTCTTCCTCCTTCGCCCAATCCTCCAAGAG
CCGGAATGCTCGTCATACCCGAGCTACTTCCTGGACATCCGGTCACGATC
AAGGCGGCGAACCCGACCCCGCGGACTTTACCTCTTCTCAACAACGTCGT
CGCAGAGAATCCAACATCTCATTAGCCGACGTCTCTGAGGGCTCTTCCGG
CCGCTACGACGACGATTCCGACGACCATCGCTCGCACGCCGACATGGCCA
TGAGAAACACCTCCTTCGACTGGGGTCCTGGACACGCTCGCAGCCGCTCC
CATTCCTACAGCCAGCCACAAATGTCGCTCTTACAACCTCAAGAACTGGC
CGACTCGTCGGCTCCCCGGCCTCGTCCAGCACCGGTAACATGGATGTCCC
TTCCGCGCAAAGGGCAGCTGGCTCTCTTGGGTCTCTGCCGTGTCTTCGAC
TTCCTTCAGATTGCCTCCCTGCAGGCGTACATGTTCTACCAACTGAAATC
CTTCGATGAGAACCTCTCCGACGCCGATGTCTCCACCCAGGCCGGTATCC
TCCAGGGTGCCTTTACCGCCGCGCAGTTTGCGACAGCCATCCCTTGGGGC
CGTGTCGCCGATGCAGAATGGGGTGGTCGGAAATTCGTCTTGCTGGTTGG
TCTTATCGGTACCGCACTGTCCTGTCTGGGTGTTGCCTATTCGACGTCTT
TCGCGCAGGCCGTGTTCTGGCGTTCGTTTGGCGGTGCCATCAACGGAACA
GTCGGTATTATTCGGACCATGATTGCGGAGAATGTCAAGGAGAAGAAATA
CCACTCGCGCGCGTTCCTGATTTTGCCTATCGGGTTTAATGTCGCTGCGC
TGTTCGGACCGGACTCTGGAAGCTTGCAAGGGCAAGCCCGGTCTGGGCGT
GTTCTCGATGCGCATCTTTGCTCGCGGCATTCGGGCAGTGGTTCCCTCGA
ACTCTCCATTGTACCAGAGGCTGCCGTTCGCGGACTACGACGAGGCTGGT
CCTCTGCTGAACCGCAGAGACCCGGCCGAAAGTTACGAGATGGAAGAGAA
GGCGACCAAGACAAGCCGCCAGGCTCGCACCTTGCCTTTCCGCCGGATCT
GGACCAAGAACGTGCTGTGCACGCTGTTGGCGCAGGCGTTCTTCGACTTT
CAGATGGGTGCTTTCAACAACCTCTGGCTGCTTTTCCTCTCTACTCCGCG
TTATGATGCCAACGACCCGGCCAGCCCGGTCCAGAGACTGCCCTTCATCT
TCACTGGCGGTTTGGGTATGCTGCCGCAAAGTGTTGGTTTCGCTACTGCC
ATTCTCGGCGTGATTGGAATGCTCCTCCAGTTCACCATCTACCCCAGTAT
CAACAACCGTCTGGGTACGGCCAAGAGTTACCAGTACTTCTTGACCCTCT
TCCCTCTGGCGTATGCATTCGCGCCGTACATTGCTCTTGCTCCGTCGTCC
GCACCCCCGCCGGGCCAGGCAAACGGCGGATGGGTGTGGTTCTCCATTAT
TGTGGTCTTGTTCCTGCAAGTGACCGCACGAACCTTTACTCTTCCCACCT
CCATCATCCTTCTAAACAACTGCTCTCCGCACCCGTCCGTGCTCGGCACC
ATCCACGGCATCGGCCAGTCTGTGTCCTCGGCGTTCCGTACCATTGGACC
GATCTTTTCCGGATCATGGTACGGCTACGGTCTGGAGATGGGCATGGTCG
GATTTGCCTGGTGGCTGATTGCATTGGTGTCGGTATTTGGCTGTGTCGCA
GCCATTTTTGTCTACGAGGGTTCCGGACATGAAGTCTTCCTTCCAGGCGA
GGAAGAAGAGCGGGACTAATGATGGGTGGTATGCTGGCTGATCCGGTCAA
GGCTTATCCTCGACTCTTCGGTCCTGACTCTTCTTTTGGAGGCGCCGACG
GTGTGCAGTGGCTTATTCGCTACCCGTATGCGCTGCCCATGCTGGCGAAT
GCCATTTTCCTGACGTTTGCTGCGGTCTGTGTCGCCATCGGTCTCGAAGA
GATGCCTGCGCCAAAATCCGGCTCTCAAGGAACCGCCGGGCGTCCGTCCT
TACCCTCTTTATCGCTCTCCTCCACCACCCCTTCCTCGGCCATCTCTACT
CCAGCGGCCACTCCCAACCCCCTCTCGGCCACCTCTTCCTCCTTCGCCCA
ATCCTCCAAGAGCCGGAATGCTCGTCATACCCGAGCTACTTCCTGGACAT
CCGGTCACGATCAAGGCGGCGAACCCGACCCCGCGGACTTTACCTCTTCT
CAACAACGTCGTCGCAGAGAATCCAACATCTCATTAGCCGACGTCTCTGA
GGGCTCTTCCGGCCGCTACGACGACGATTCCGACGACCATCGCTCGCACG
CCGACATGGCCATGAGAAACACCTCCTTCGACTGGGGTCCTGGACACGCT
CGCAGCCGCTCCCATTCCTACAGCCAGCCACAAATGTCGCTCTTACAACC
TCAAGAACTGGCCGACTCGTCGGCTCCCCGGCCTCGTCCAGCACCGGTAA
CATGGATGTCCCTTCCGCGCAAAGGGCAGCTGGCTCTCTTGGGTCTCTGC
CGTGTCTTCGACTTCCTTCAGATTGCCTCCCTGCAGGCGTACATGTTCTA
CCAACTGAAATCCTTCGATGAGAACCTCTCCGACGCCGATGTCTCCACCC
AGGCCGGTATCCTCCAGGGTGCCTTTACCGCCGCGCAGTTTGCGACAGCC
ATCCCTTGGGGCCGTGTCGCCGATGCAGAATGGGGTGGTCGGAAATTCGT
CTTGCTGGTTGGTCTTATCGGTACCGCACTGTCCTGTCTGGGTGTTGCCT
ATTCGACGTCTTTCGCGCAGGCCGTGTTCTGGCGTTCGTTTGGCGGTGCC
ATCAACGGAACAGTCGGTATTATTCGGACCATGATTGCGGAGAATGTCAA
GGAGAAGAAATACCACTCGCGCGCGTTCCTGATTTTGCCTATCGGGTTTA
ATGTCGCTGCGCTGTTCGGACCGGACTCTGGAAGCTTGCAAGGGCAAGCC
CGGTCTGGGCGTGTTCTCGATGCGCATCTTTGCTCGCGGCATTCGGGCAG
TGGTTCCCTCGAACTCTCCATTGTACCAGAGGCTGCCGTTCGCGGACTAC
GACGAGGCTGGTCCTCTGCTGAACCGCAGAGACCCGGCCGAAAGTTACGA
GATGGAAGAGAAGGCGACCAAGACAAGCCGCCAGGCTCGCACCTTGCCTT
TCCGCCGGATCTGGACCAAGAACGTGCTGTGCACGCTGTTGGCGCAGGCG
TTCTTCGACTTTCAGATGGGTGCTTTCAACAACCTCTGGCTGCTTTTCCT
CTCTACTCCGCGTTATGATGCCAACGACCCGGCCAGCCCGGTCCAGAGAC
TGCCCTTCATCTTCACTGGCGGTTTGGGTATGCTGCCGCAAAGTGTTGGT
TTCGCTACTGCCATTCTCGGCGTGATTGGAATGCTCCTCCAGTTCACCAT
CTACCCCAGTATCAACAACCGTCTGGGTACGGCCAAGAGTTACCAGTACT
TCTTGACCCTCTTCCCTCTGGCGTATGCATTCGCGCCGTACATTGCTCTT
GCTCCGTCGTCCGCACCCCCGCCGGGCCAGGCAAACGGCGGATGGGTGTG
GTTCTCCATTATTGTGGTCTTGTTCCTGCAAGTGACCGCACGAACCTTTA
CTCTTCCCACCTCCATCATCCTTCTAAACAACTGCTCTCCGCACCCGTCC
GTGCTCGGCACCATCCACGGCATCGGCCAGTCTGTGTCCTCGGCGTTCCG
TACCATTGGACCGATCTTTTCCGGATCATGGTACGGCTACGGTCTGGAGA
TGGGCATGGTCGGATTTGCCTGGTGGCTGATTGCATTGGTGTCGGTATTT
GGCTGTGTCGCAGCCATTTTTGTCTACGAGGGTTCCGGACATGAAGTCTT
CCTTCCAGGCGAGGAAGAAGAGCGGGACTAATGATGGGTGGTATGCTGGC
TGATCCGGTCAAGGCTTATCCTCGACTCTTCGGTCCTGACTCTTCTTTTG
GAGGCGCCGACGGTGTGCAGTGGCTTATTCGCTACCCGTATGCGCTGCCC
ATGCTGGCGAATGCCATTTTCCTGACGTTTGCTGCGGTCTGTGTCGCCAT
CGGTCTCGAAGAGATGCCTGCGCCAAAATCCGGCTCTCAAGGAACCGCCG
GGCGTCCGTCCTTACCCTCTTTATCGCTCTCCTCCACCACCCCTTCCTCG
GCCATCTCTACTCCAGCGGCCACTCCCAACCCCCTCTCGGCCACCTCTTC
CTCCTTCGCCCAATCCTCCAAGAGCCGGAATGCTCGTCATACCCGAGCTA
CTTCCTGGACATCCGGTCACGATCAAGGCGGCGAACCCGACCCCGCGGAC
TTTACCTCTTCTCAACAACGTCGTCGCAGAGAATCCAACATCTCATTAGC
CGACGTCTCTGAGGGCTCTTCCGGCCGCTACGACGACGATTCCGACGACC
ATCGCTCGCACGCCGACATGGCCATGAGAAACACCTCCTTCGACTGGGGT
CCTGGACACGCTCGCAGCCGCTCCCATTCCTACAGCCAGCCACAAATGTC
GCTCTTACAACCTCAAGAACTGGCCGACTCGTCGGCTCCCCGGCCTCGTC
CAGCACCGGTAACATGGATGTCCCTTCCGCGCAAAGGGCAGCTGGCTCTC
TTGGGTCTCTGCCGTGTCTTCGACTTCCTTCAGATTGCCTCCCTGCAGGC
GTACATGTTCTACCAACTGAAATCCTTCGATGAGAACCTCTCCGACGCCG
ATGTCTCCACCCAGGCCGGTATCCTCCAGGGTGCCTTTACCGCCGCGCAG
TTTGCGACAGCCATCCCTTGGGGCCGTGTCGCCGATGCAGAATGGGGTGG
TCGGAAATTCGTCTTGCTGGTTGGTCTTATCGGTACCGCACTGTCCTGTC
TGGGTGTTGCCTATTCGACGTCTTTCGCGCAGGCCGTGTTCTGGCGTTCG
TTTGGCGGTGCCATCAACGGAACAGTCGGTATTATTCGGACCATGATTGC
GGAGAATGTCAAGGAGAAGAAATACCACTCGCGCGCGTTCCTGATTTTGC
CTATCGGGTTTAATGTCGCTGCGCTGTTCGGACCGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012376-T1.utr3p1 | KJC3_012376-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012376-T1.utr5p1 | KJC3_012376-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3391905..3395159 - |
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