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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3444843..3447548+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012395-T2 ID=KJC3_012395-T2|Name=KJC3_012395-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2706bp|location=Sequence derived from alignment at ch8:3444843..3447548+ (Aspergillus niger KJC3)
GTACATTCCGCCCCTTCCACGAGATTGCAGGCTCAATCTTTCTATCTCAT
AGACTCGCTGCCAGTCATGGAGAGCCGTGGCTTGACCCTCCGCAGCAAGT
CGCGCCGCCCCCGCCCCCAGATCAGTGCTCCGAAGCCCATATCCGGCCCT
TTGCCGACCAATAACGGCAGTAAGGGTGCCGGTACTCCAGGGCAGAACAC
TTCCTCTCCCAGCTCGACATCCCTGGACCGGGCCCCTTCGAAGGGCGCGA
CCTCTGATCTAGTCAAGCGCCGCTATTCCACCCGTTTTAATCAGGCCCCC
GACTTCGATGTCAGCGCTCCGCCGGTGCCGGGCCTGCCCAAGGCACCAGC
CACGTATGGCGGGCTCAGCCCACCCGAGACGAGTCGAAGACCGTCCACCG
AGTCTTCTGGTCCCCCCAAGGTGGACTTGAATGCCCTTCGGGATCCTAGC
CTCCCAGTTGACAAGTGTGAGTGACGCCCGACATAGGTCCCCGCGTTTCC
CCCCTCCCGATCCCACGGGTGCTAACGTGGCACCAATCTCCGCCAGACGT
TGCCAACCTACTCGCCAATGCCTCGGAAGAGGAAATCGAAGCATATCAGA
AGAGCCTTCGCAAGGTCAAAAACCGAACTTCGACCGATCTGCAGCAAAAT
GTTTACCAGAACCGCACTCAATTCATCAAGATCAGTAAGGAGGCGGAGAA
GCTCAAAGGGGAAATGCGGACCCTCCGCACTCTGATGGCGGAGCTTACCA
CTGCGCTCGGACAGACCACCATCGGCAACACCCCGAATCCCATGTCCCCC
GCCGTTGACGAGTACATGCCGAAACGTAATGCCAACCGGAGTTCTGTCGC
TAATCTGGAGAGCATGTGGAACGTCCAGCTTCAAACCCTCTGGAAGACGG
TGGAGGGCTCCCAGAAGTTCCTACCGGTGGTACCTGGCCGACACATCGTG
ATGGAGACGGGGCATTGGGTGGAACTGGACTCTGCAACCTGGAAGCCCAG
GCGACCAGTTCACATAGTGTTGCTCAACGACCACCTGCTGATCGCCGCGA
AGAAGCGCAAGCGGGTTGACCAGAGCAGCCATCGCGGGCCGGTCCCCACC
AAGCTGGTCGCGGAAGAATGCTGGCCCTTACAAGACGTCGATATGATCGA
CCTTGGTGCCAATCTCTCCGCGGGGGTTGCTCGAGATGAAGCCGAAGACC
GGGGAATTGCGAATGCAATCAACGTCCGCGTCGGCGGGAAGCCGTTTACC
TATCGTCATGACAAGCGCGACAGCTCGGCTAAAGGGGAACTGCTCGCGAC
CTTCCGGAAGACTGTCGAGGATCTCCGACGTAATCTTCGCTCGGAGACTG
AGGCCGCAAGCAAATCCACCGAGTCATTCGGCTACCTGGGCGTCCGGCGC
CCCTCCCATTCCCCCATGCCGGATCAGTATGACGGCGGCGAAAGCACCCG
CGACAAGCCGGAGGTGCGTATCGATGTGGATGGAAAGCAACAGAATCTTC
GTTGGGTGGACGGGCAGGTGGACGAATTGGATATTGACATCGCCCTGCAG
CGGTTTGAGGAGGCTGTGTCTAACGTCGAGCGGCTTCGCAAGCTCGCCAA
GGGCCTGAAGGGCAACGCGGTCGCGCAGGACGTGATCAATACGAAGGTCG
ACGAGCGTGCAGCCACCCTGGCGGAGGTACTTCTGCGAGCGCTCGTGGAT
ACACACTCATTTCCCGTGTCGACCAAAACGAGGGTCTCCTGGCTCACGCG
GCTAGGCTTTGAAGATCAAGCCCGGGAAGCTTACTTGAAAACCCGCTCGG
AAATCGTCTCCAAACGGATCCGGTATGTCTCCCGATACCGCTCACCCAGT
CGCACGAATACTAACCTACTGCAGTGCCTGTATCTTCGAGGGAGACCTCC
CACTCTACATTTTCCAGATCTCCTACGTCTACTTCACGTTGATCAAGAAC
ACCATTAGCATCTACCAACAGTGTTTTCCGCCGGTCATGTCCAGCGCCAG
TATCCGTTGGGCAAAACACCACCTTGACGGCTTTAACGCCCTGCTCACGC
GCCAGCTCAGCAGCGTCCAACGCGGCACAACTGTCTGGCAGAAATGCATT
GACATCGTGCATGAGCAGGCTGATCAGCTGACCGAGGTAGGCGTGGACTT
TACCGACCTCGTCGCGAAGGACTTGGAGACGGGTGAAGAGTTCACCGAAC
GACCGCAGATGACCCGGTCTGAGTCCCTTATTTCCGGGTTAGCGGATACT
GCAGCGGCAGCTGCAATTATTTAAGTGACGCGTGTATATTGGCTTATCTT
TCTGTCTATTACCACTAGCCTCAGGAGGCTATGTTTGATGATGTGTGTTC
TGCGTCGCCCGTTTGTGCACTTTTATATTTTCAGTCTGTTTGACATAGAC
CCCACGCGCCGTGCTCCAGAATGGACCTATGTTCGTGTCTTCTATTCTGT
ATTCTCTAAATGTTCTACCCATACCCATGAACGCTGAGCTTCGTCGTGTA
TATGGCGCTATACCGACGTTCAATGGATCCATGTATACCCCGCACAAATT
ATTCCTCCCTTGAATTGAAACTTGCAATCGACAAGTCTGAAAAAATTCCT
ACAAGCAGAGATACGCAGATACCTGTCCTTCAAGCTACCTCCATCATGTT
ACTGAAGCGGGGGATAGAGTAGTAGGAAAAGCGTCTAGAGGATCTCCGAA
GTCGGC back to topCoding sequence (CDS) from alignment at ch8:3444843..3447548+ >KJC3_012395-T2 ID=KJC3_012395-T2|Name=KJC3_012395-T2|organism=Aspergillus niger KJC3|type=CDS|length=4725bp|location=Sequence derived from alignment at ch8:3444843..3447548+ (Aspergillus niger KJC3)
ATGCCTCGGAAGAGGAAATCGAAGCATATCAGAAGAGCCTTCGCAAGGTC
AAAAACCGAACTTCGACCGATCTGCAGCAAAATGTTTACCAGAACCGCAC
TCAATTCATCAAGATCAACCACCATCGGCAACACCCCGAATCCCATGTCC
CCCGCCGTTGACGAGTACATGCCGAAACGTAATGCCAACCGGAGTTCTGT
CGCTAATCTGGAGAGCATGTGGAACGTCCAGCTTCAAACCCTCTGGAAGA
CGGTGGAGGGCTCCCAGAAGTTCCTACCGGTGGTACCTGGCCGACACATC
GTGATGGAGACGGGGCATTGGGTGGAACTGGACTCTGCAACCTGGAAGCC
CAGGCGACCAGTTCACATAGTGTTGCTCAACGACCACCTGCTGATCGCCG
CGAAGAAGCGCAAGCGGGTTGACCAGAGCAGCCATCGCGGGCCGGTCCCC
ACCAAGCTGGTCGCGGAAGAATGCTGGCCCTTACAAGACGTCGATATGAT
CGACCTTGGTGCCAATCTCTCCGCGGGGGTTGCTCGAGATGAAGCCGAAG
ACCGGGGAATTGCGAATGCAATCAACGTCCGCGTCGGCGGGAAGCCGTTT
ACCTATCGTCATGACAAGCGCGACAGCTCGGCTAAAGGGGAACTGCTCGC
GACCTTCCGGAAGACTGTCGAGGATCTCCGACGTAATCTTCGCTCGGAGA
CTGAGGCCGCAAGCAAATCCACCGAGTCATTCGGCTACCTGGGCGTCCGG
CGCCCCTCCCATTCCCCCATGCCGGATCAGTATGACGGCGGCGAAAGCAC
CCGCGACAAGCCGGAGGTGCGTATCGATGTGGATGGAAAGCAACAGAATC
TTCGTTGGGTGGACGGGCAGGTGGACGAATTGGATATTGACATCGCCCTG
CAGCGGTTTGAGGAGGCTGTGTCTAACGTCGAGCGGCTTCGCAAGCTCGC
CAAGGGCCTGAAGGGCAACGCGGTCGCGCAGGACGTGATCAATACGAAGG
TCGACGAGCGTGCAGCCACCCTGGCGGAGGTACTTCTGCGAGCGCTCGTG
GATACACACTCATTTCCCGTGTCGACCAAAACGAGGGTCTCCTGGCTCAC
GCGGCTAGGCTTTGAAGATCAAGCCCGGGAAGCTTACTTGAAAACCCGCT
CGGAAATCGTCTCCAAACGGATCCGTGCCTGTATCTTCGAGGGAGACCTC
CCACTCTACATTTTCCAGATCTCCTACGTCTACTTCACGTTGATCAAGAA
CACCATTAGCATCTACCAACAGTGTTTTCCGCCGGTCATGTCCAGCGCCA
GTATCCGTTGGGCAAAACACCACCTTGACGGCTTTAACGCCCTGCTCACG
CGCCAGCTCAGCAGCGTCCAACGCGGCACAACTGTCTGGCAGAAATGCAT
TGACATCGTGCATGAGCAGGCTGATCAGCTGACCGAGGTAGGCGTGGACT
TTACCGACCTCGTCGCGAAGGACTTGGAGACGGGTGAAGAGTTCACCGAA
CGACCGCAGATGACCCGGTCTGAGTCCCTTATTTCCGGGTTAGCGGATAC
TGCAGCGGCAGCTGCAATTATTTAAATGCCTCGGAAGAGGAAATCGAAGC
ATATCAGAAGAGCCTTCGCAAGGTCAAAAACCGAACTTCGACCGATCTGC
AGCAAAATGTTTACCAGAACCGCACTCAATTCATCAAGATCAACCACCAT
CGGCAACACCCCGAATCCCATGTCCCCCGCCGTTGACGAGTACATGCCGA
AACGTAATGCCAACCGGAGTTCTGTCGCTAATCTGGAGAGCATGTGGAAC
GTCCAGCTTCAAACCCTCTGGAAGACGGTGGAGGGCTCCCAGAAGTTCCT
ACCGGTGGTACCTGGCCGACACATCGTGATGGAGACGGGGCATTGGGTGG
AACTGGACTCTGCAACCTGGAAGCCCAGGCGACCAGTTCACATAGTGTTG
CTCAACGACCACCTGCTGATCGCCGCGAAGAAGCGCAAGCGGGTTGACCA
GAGCAGCCATCGCGGGCCGGTCCCCACCAAGCTGGTCGCGGAAGAATGCT
GGCCCTTACAAGACGTCGATATGATCGACCTTGGTGCCAATCTCTCCGCG
GGGGTTGCTCGAGATGAAGCCGAAGACCGGGGAATTGCGAATGCAATCAA
CGTCCGCGTCGGCGGGAAGCCGTTTACCTATCGTCATGACAAGCGCGACA
GCTCGGCTAAAGGGGAACTGCTCGCGACCTTCCGGAAGACTGTCGAGGAT
CTCCGACGTAATCTTCGCTCGGAGACTGAGGCCGCAAGCAAATCCACCGA
GTCATTCGGCTACCTGGGCGTCCGGCGCCCCTCCCATTCCCCCATGCCGG
ATCAGTATGACGGCGGCGAAAGCACCCGCGACAAGCCGGAGGTGCGTATC
GATGTGGATGGAAAGCAACAGAATCTTCGTTGGGTGGACGGGCAGGTGGA
CGAATTGGATATTGACATCGCCCTGCAGCGGTTTGAGGAGGCTGTGTCTA
ACGTCGAGCGGCTTCGCAAGCTCGCCAAGGGCCTGAAGGGCAACGCGGTC
GCGCAGGACGTGATCAATACGAAGGTCGACGAGCGTGCAGCCACCCTGGC
GGAGGTACTTCTGCGAGCGCTCGTGGATACACACTCATTTCCCGTGTCGA
CCAAAACGAGGGTCTCCTGGCTCACGCGGCTAGGCTTTGAAGATCAAGCC
CGGGAAGCTTACTTGAAAACCCGCTCGGAAATCGTCTCCAAACGGATCCG
TGCCTGTATCTTCGAGGGAGACCTCCCACTCTACATTTTCCAGATCTCCT
ACGTCTACTTCACGTTGATCAAGAACACCATTAGCATCTACCAACAGTGT
TTTCCGCCGGTCATGTCCAGCGCCAGTATCCGTTGGGCAAAACACCACCT
TGACGGCTTTAACGCCCTGCTCACGCGCCAGCTCAGCAGCGTCCAACGCG
GCACAACTGTCTGGCAGAAATGCATTGACATCGTGCATGAGCAGGCTGAT
CAGCTGACCGAGGTAGGCGTGGACTTTACCGACCTCGTCGCGAAGGACTT
GGAGACGGGTGAAGAGTTCACCGAACGACCGCAGATGACCCGGTCTGAGT
CCCTTATTTCCGGGTTAGCGGATACTGCAGCGGCAGCTGCAATTATTTAA
ATGCCTCGGAAGAGGAAATCGAAGCATATCAGAAGAGCCTTCGCAAGGTC
AAAAACCGAACTTCGACCGATCTGCAGCAAAATGTTTACCAGAACCGCAC
TCAATTCATCAAGATCAACCACCATCGGCAACACCCCGAATCCCATGTCC
CCCGCCGTTGACGAGTACATGCCGAAACGTAATGCCAACCGGAGTTCTGT
CGCTAATCTGGAGAGCATGTGGAACGTCCAGCTTCAAACCCTCTGGAAGA
CGGTGGAGGGCTCCCAGAAGTTCCTACCGGTGGTACCTGGCCGACACATC
GTGATGGAGACGGGGCATTGGGTGGAACTGGACTCTGCAACCTGGAAGCC
CAGGCGACCAGTTCACATAGTGTTGCTCAACGACCACCTGCTGATCGCCG
CGAAGAAGCGCAAGCGGGTTGACCAGAGCAGCCATCGCGGGCCGGTCCCC
ACCAAGCTGGTCGCGGAAGAATGCTGGCCCTTACAAGACGTCGATATGAT
CGACCTTGGTGCCAATCTCTCCGCGGGGGTTGCTCGAGATGAAGCCGAAG
ACCGGGGAATTGCGAATGCAATCAACGTCCGCGTCGGCGGGAAGCCGTTT
ACCTATCGTCATGACAAGCGCGACAGCTCGGCTAAAGGGGAACTGCTCGC
GACCTTCCGGAAGACTGTCGAGGATCTCCGACGTAATCTTCGCTCGGAGA
CTGAGGCCGCAAGCAAATCCACCGAGTCATTCGGCTACCTGGGCGTCCGG
CGCCCCTCCCATTCCCCCATGCCGGATCAGTATGACGGCGGCGAAAGCAC
CCGCGACAAGCCGGAGGTGCGTATCGATGTGGATGGAAAGCAACAGAATC
TTCGTTGGGTGGACGGGCAGGTGGACGAATTGGATATTGACATCGCCCTG
CAGCGGTTTGAGGAGGCTGTGTCTAACGTCGAGCGGCTTCGCAAGCTCGC
CAAGGGCCTGAAGGGCAACGCGGTCGCGCAGGACGTGATCAATACGAAGG
TCGACGAGCGTGCAGCCACCCTGGCGGAGGTACTTCTGCGAGCGCTCGTG
GATACACACTCATTTCCCGTGTCGACCAAAACGAGGGTCTCCTGGCTCAC
GCGGCTAGGCTTTGAAGATCAAGCCCGGGAAGCTTACTTGAAAACCCGCT
CGGAAATCGTCTCCAAACGGATCCGTGCCTGTATCTTCGAGGGAGACCTC
CCACTCTACATTTTCCAGATCTCCTACGTCTACTTCACGTTGATCAAGAA
CACCATTAGCATCTACCAACAGTGTTTTCCGCCGGTCATGTCCAGCGCCA
GTATCCGTTGGGCAAAACACCACCTTGACGGCTTTAACGCCCTGCTCACG
CGCCAGCTCAGCAGCGTCCAACGCGGCACAACTGTCTGGCAGAAATGCAT
TGACATCGTGCATGAGCAGGCTGATCAGCTGACCGAGGTAGGCGTGGACT
TTACCGACCTCGTCGCGAAGGACTTGGAGACGGGTGAAGAGTTCACCGAA
CGACCGCAGATGACCCGGTCTGAGTCCCTTATTTCCGGGTTAGCGGATAC
TGCAGCGGCAGCTGCAATTATTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012395-T2.utr5p1 | KJC3_012395-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012395-T2.utr3p1 | KJC3_012395-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016159 |
| DBxref | InterPro:IPR042560 |
| DBxref | InterPro:IPR032403 |
| DBxref | InterPro:IPR042561 |
| DBxref | InterPro:IPR011993 |
| DBxref | PFAM:PF16528 |
| Product | variant 2 |
| Product | exocyst complex component exo84 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3444843..3447548 + |
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