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KJC3_012411-T1, KJC3_012411-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012411-T1
Unique NameKJC3_012411-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3492675..3494085+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012411-T1 ID=KJC3_012411-T1|Name=KJC3_012411-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1411bp|location=Sequence derived from alignment at ch8:3492675..3494085+ (Aspergillus niger KJC3)
GGGAGATCGACCTCGTAGGACAAGTAAGATGGTTGTTGACTTCCGGCCGG
TGTAAAGACAACCTGTTACACTCTTCTCTCCCAGATTTCCAGGATCATTG
TCTGATATAAAGGCCACATCTCCAATACGTGGAGCTAATCAACGCGGTCA
TATTTCTGTTCTCCATACTTCATCCATCATGTCCTCAGTAGCCAAACGTC
GTCTCCAAGCCGTGAGCCAGCAATTGGTGGAAGGCATTCCGGATGCAGGC
ACATTCGAGGGCATTCCTCGCATCCGCCAGGTTGCTGGCGATTCTGTCGG
ACCGTGAGCATATACTTACAACTCCTTGTATACATACTTCCCTCAAAACT
AACAACGTACCACCGAACCAGCCGAGTCAAGGACAAAGTCGCAATTGTAA
CCGGTAAAAACTCCCCTTCAACATACTACTCACTATCAGCATGCACAAAT
ACACACACACACATAGAAATACATACTAATAGCAACCAGGGGCCAACTCC
CCCGCAGGCATCGGCCGCGCCGCAGCGCACCAATATGCCCACAACGGCGC
CAAAGCCATCTACATCTGTGACTACGCTGACAGCCACCTGGCAACACACA
AGCGGGAGATTGAATCCCTGTATCCCGGTGTAGACATTCACATCCGCCAA
TTCGACGCCGCCGACGAAGAAGCCGTTAAAGCGGTCGTGCACGACGCACT
AGAGAAGTATAACCGACTGGATATATTTTTCGCCAATGCGGGCATCGTGG
GCCAGCCGAAGATCTTCACTGAGGTAACGGCGGAGGAGTTGATGAAGACG
TTGAATACGAATGTGGCTAGGTGAGCATCCTATCTGCATCGAGGGAGTGA
AATCCTAATATGATTCTTGAAATAGTGTCTTCCTAGCAGCCAAATACGCT
TCCGAGGGTATGAAGCGTACCTCGGAGGCGAAGCGGTACCCCGGAGGTTC
TATTATTTGCACAGCCTCTATTGCGGGCCTGCGCTCTAATGGTGGTTCGA
CGGATTACTCTGCTTCCAAGGCGGCGGTTGTTTCCATTGCCCAGACGTGT
GCGTATCAGTTGGCTGGGACGGGGATTCGCATCAATGCGATCTGTCCGGG
GTTGATCGAAACAGGCATGACTCAGGCGATGTTTGATGCCGCACGGGCGC
GAGGCACGGAGCGGAAGGTCGGGCAGCTGAATCCTCTGCAGCGCGGAGCG
GTTGCGGATGAGGTAGCTCGGGTGGCATTGTTCCTGGGGAGTGATGAGAG
TAGCTATGTTAATGGGCAGGCTTGGGCCGTATGTGGTGGTCTCAGTGCTG
GACATCCGTTTGTGCCGGGCAAGTTGGCATAGTGGGTATCCAGCATGTTA
TCTATCAAGTTACTCAAATTACTCTTCTAAAACGAATACAGAGTCTTCAA
ATGAGATTTGT
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Coding sequence (CDS) from alignment at ch8:3492675..3494085+

>KJC3_012411-T1 ID=KJC3_012411-T1|Name=KJC3_012411-T1|organism=Aspergillus niger KJC3|type=CDS|length=3780bp|location=Sequence derived from alignment at ch8:3492675..3494085+ (Aspergillus niger KJC3)
ATGTCCTCAGTAGCCAAACGTCGTCTCCAAGCCGTGAGCCAGCAATTGGT
GGAAGGCATTCCGGATGCAGGCACATTCGAGGGCATTCCTCGCATCCGCC
AGGTTGCTGGCGATTCTGTCGGACCCCGAGTCAAGGACAAAGTCGCAATT
GTAACCGGGGCCAACTCCCCCGCAGGCATCGGCCGCGCCGCAGCGCACCA
ATATGCCCACAACGGCGCCAAAGCCATCTACATCTGTGACTACGCTGACA
GCCACCTGGCAACACACAAGCGGGAGATTGAATCCCTGTATCCCGGTGTA
GACATTCACATCCGCCAATTCGACGCCGCCGACGAAGAAGCCGTTAAAGC
GGTCGTGCACGACGCACTAGAGAAGTATAACCGACTGGATATATTTTTCG
CCAATGCGGGCATCGTGGGCCAGCCGAAGATCTTCACTGAGGTAACGGCG
GAGGAGTTGATGAAGACGTTGAATACGAATGTGGCTAGTGTCTTCCTAGC
AGCCAAATACGCTTCCGAGGGTATGAAGCGTACCTCGGAGGCGAAGCGGT
ACCCCGGAGGTTCTATTATTTGCACAGCCTCTATTGCGGGCCTGCGCTCT
AATGGTGGTTCGACGGATTACTCTGCTTCCAAGGCGGCGGTTGTTTCCAT
TGCCCAGACGTGTGCGTATCAGTTGGCTGGGACGGGGATTCGCATCAATG
CGATCTGTCCGGGGTTGATCGAAACAGGCATGACTCAGGCGATGTTTGAT
GCCGCACGGGCGCGAGGCACGGAGCGGAAGGTCGGGCAGCTGAATCCTCT
GCAGCGCGGAGCGGTTGCGGATGAGGTAGCTCGGGTGGCATTGTTCCTGG
GGAGTGATGAGAGTAGCTATGTTAATGGGCAGGCTTGGGCCGTATGTGGT
GGTCTCAGTGCTGGACATCCGTTTGTGCCGGGCAAGTTGGCATAGATGTC
CTCAGTAGCCAAACGTCGTCTCCAAGCCGTGAGCCAGCAATTGGTGGAAG
GCATTCCGGATGCAGGCACATTCGAGGGCATTCCTCGCATCCGCCAGGTT
GCTGGCGATTCTGTCGGACCCCGAGTCAAGGACAAAGTCGCAATTGTAAC
CGGGGCCAACTCCCCCGCAGGCATCGGCCGCGCCGCAGCGCACCAATATG
CCCACAACGGCGCCAAAGCCATCTACATCTGTGACTACGCTGACAGCCAC
CTGGCAACACACAAGCGGGAGATTGAATCCCTGTATCCCGGTGTAGACAT
TCACATCCGCCAATTCGACGCCGCCGACGAAGAAGCCGTTAAAGCGGTCG
TGCACGACGCACTAGAGAAGTATAACCGACTGGATATATTTTTCGCCAAT
GCGGGCATCGTGGGCCAGCCGAAGATCTTCACTGAGGTAACGGCGGAGGA
GTTGATGAAGACGTTGAATACGAATGTGGCTAGTGTCTTCCTAGCAGCCA
AATACGCTTCCGAGGGTATGAAGCGTACCTCGGAGGCGAAGCGGTACCCC
GGAGGTTCTATTATTTGCACAGCCTCTATTGCGGGCCTGCGCTCTAATGG
TGGTTCGACGGATTACTCTGCTTCCAAGGCGGCGGTTGTTTCCATTGCCC
AGACGTGTGCGTATCAGTTGGCTGGGACGGGGATTCGCATCAATGCGATC
TGTCCGGGGTTGATCGAAACAGGCATGACTCAGGCGATGTTTGATGCCGC
ACGGGCGCGAGGCACGGAGCGGAAGGTCGGGCAGCTGAATCCTCTGCAGC
GCGGAGCGGTTGCGGATGAGGTAGCTCGGGTGGCATTGTTCCTGGGGAGT
GATGAGAGTAGCTATGTTAATGGGCAGGCTTGGGCCGTATGTGGTGGTCT
CAGTGCTGGACATCCGTTTGTGCCGGGCAAGTTGGCATAGATGTCCTCAG
TAGCCAAACGTCGTCTCCAAGCCGTGAGCCAGCAATTGGTGGAAGGCATT
CCGGATGCAGGCACATTCGAGGGCATTCCTCGCATCCGCCAGGTTGCTGG
CGATTCTGTCGGACCCCGAGTCAAGGACAAAGTCGCAATTGTAACCGGGG
CCAACTCCCCCGCAGGCATCGGCCGCGCCGCAGCGCACCAATATGCCCAC
AACGGCGCCAAAGCCATCTACATCTGTGACTACGCTGACAGCCACCTGGC
AACACACAAGCGGGAGATTGAATCCCTGTATCCCGGTGTAGACATTCACA
TCCGCCAATTCGACGCCGCCGACGAAGAAGCCGTTAAAGCGGTCGTGCAC
GACGCACTAGAGAAGTATAACCGACTGGATATATTTTTCGCCAATGCGGG
CATCGTGGGCCAGCCGAAGATCTTCACTGAGGTAACGGCGGAGGAGTTGA
TGAAGACGTTGAATACGAATGTGGCTAGTGTCTTCCTAGCAGCCAAATAC
GCTTCCGAGGGTATGAAGCGTACCTCGGAGGCGAAGCGGTACCCCGGAGG
TTCTATTATTTGCACAGCCTCTATTGCGGGCCTGCGCTCTAATGGTGGTT
CGACGGATTACTCTGCTTCCAAGGCGGCGGTTGTTTCCATTGCCCAGACG
TGTGCGTATCAGTTGGCTGGGACGGGGATTCGCATCAATGCGATCTGTCC
GGGGTTGATCGAAACAGGCATGACTCAGGCGATGTTTGATGCCGCACGGG
CGCGAGGCACGGAGCGGAAGGTCGGGCAGCTGAATCCTCTGCAGCGCGGA
GCGGTTGCGGATGAGGTAGCTCGGGTGGCATTGTTCCTGGGGAGTGATGA
GAGTAGCTATGTTAATGGGCAGGCTTGGGCCGTATGTGGTGGTCTCAGTG
CTGGACATCCGTTTGTGCCGGGCAAGTTGGCATAGATGTCCTCAGTAGCC
AAACGTCGTCTCCAAGCCGTGAGCCAGCAATTGGTGGAAGGCATTCCGGA
TGCAGGCACATTCGAGGGCATTCCTCGCATCCGCCAGGTTGCTGGCGATT
CTGTCGGACCCCGAGTCAAGGACAAAGTCGCAATTGTAACCGGGGCCAAC
TCCCCCGCAGGCATCGGCCGCGCCGCAGCGCACCAATATGCCCACAACGG
CGCCAAAGCCATCTACATCTGTGACTACGCTGACAGCCACCTGGCAACAC
ACAAGCGGGAGATTGAATCCCTGTATCCCGGTGTAGACATTCACATCCGC
CAATTCGACGCCGCCGACGAAGAAGCCGTTAAAGCGGTCGTGCACGACGC
ACTAGAGAAGTATAACCGACTGGATATATTTTTCGCCAATGCGGGCATCG
TGGGCCAGCCGAAGATCTTCACTGAGGTAACGGCGGAGGAGTTGATGAAG
ACGTTGAATACGAATGTGGCTAGTGTCTTCCTAGCAGCCAAATACGCTTC
CGAGGGTATGAAGCGTACCTCGGAGGCGAAGCGGTACCCCGGAGGTTCTA
TTATTTGCACAGCCTCTATTGCGGGCCTGCGCTCTAATGGTGGTTCGACG
GATTACTCTGCTTCCAAGGCGGCGGTTGTTTCCATTGCCCAGACGTGTGC
GTATCAGTTGGCTGGGACGGGGATTCGCATCAATGCGATCTGTCCGGGGT
TGATCGAAACAGGCATGACTCAGGCGATGTTTGATGCCGCACGGGCGCGA
GGCACGGAGCGGAAGGTCGGGCAGCTGAATCCTCTGCAGCGCGGAGCGGT
TGCGGATGAGGTAGCTCGGGTGGCATTGTTCCTGGGGAGTGATGAGAGTA
GCTATGTTAATGGGCAGGCTTGGGCCGTATGTGGTGGTCTCAGTGCTGGA
CATCCGTTTGTGCCGGGCAAGTTGGCATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012411KJC3_012411Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012411-T1KJC3_012411-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012411-T1.utr5p1KJC3_012411-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012411-T1.exon1KJC3_012411-T1.exon1Aspergillus niger KJC3exon
KJC3_012411-T1.exon2KJC3_012411-T1.exon2Aspergillus niger KJC3exon
KJC3_012411-T1.exon3KJC3_012411-T1.exon3Aspergillus niger KJC3exon
KJC3_012411-T1.exon4KJC3_012411-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012411-T1.cdsKJC3_012411-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012411-T1.utr3p1KJC3_012411-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3492675..3494085 +
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