You are here

Home

KJC3_012419-T1, KJC3_012419-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012419-T1
Unique NameKJC3_012419-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3520739..3523173+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012419-T1 ID=KJC3_012419-T1|Name=KJC3_012419-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2435bp|location=Sequence derived from alignment at ch8:3520739..3523173+ (Aspergillus niger KJC3)
TATTTATCATCTCTGTGGTGTGTACACATCTCCAATATAGCCTGATACTA
CTACATACATGCATGCTAGCGGCATATCCGAATCTGGTTAGAGAATTGGA
CCCCATGACTCACTCATTGGTAGAGTCTTCAGCAGTGGATCATCATGGCC
TGAGCGGCAAAATCTGCGCTTTTCTTCCTTGCGTAATGCGATTACCGGAT
CCCTGACATCTCCCATACAAAACCTCTCTCTCCCTGCTGCCATTGATTCT
AATAAATCCTGCTGCTTCCCATTCCTGCGGGTCCAATCCCTCTCACACAA
CATACACACCCGCCCCCTGTCCTTCCCGTGCAATTGCGCGGATGACTGTA
CTGCAGTGATACATTAGCAGCAGCAATCCAACCAACCAAACCTTCTCCGT
GGAACCCATTTCCGACATGGCCCGCCGGAACAGCATACGCGGGATCACAG
ACGAGCAGCACGGCCGGTATAGATCCAGCTCGCCGCTCGCCCGCACTGCC
ATCGCCCGCGATATTGAAGACTACGCCGACGACGAAGGATCCATGCTCAC
CACCGACGACGAAGCCTCCGAAACCTCCACCATCCGCGCCATTAACAGCC
AGCCCGGCACGAATCCCCATTCGCTGGCCGGGTCGTACCAGCGGCCCGGA
TTCTTCACTACCGTCTCGCACGCGACGGTTGTGCCGCATCGGCCGGATAA
CGAGGGGTTAACGCGGCGGGAGCGGGAGCGGGCCATTGAGGATGAGCGGA
ATCTTCTCACTGATAATCGATGCATTGAGCCGGGTGTGCAGAAGGGAGGG
CGCATGAGACGCGGGTCGGGTGTGGAAGCGACGGAGACGGCTGCATTGTT
GGGCGGGCAGCGTCGCGGATCACAGTATGAGACGGTTGAGGATCAGGAGG
AGATTGATCGGAAGTGGGAGGAGGCTGTTACCGCTGGGTTGATTCAGACG
ACGTGGAAGCGTGAAGCTCAGGTCATTGGGAAGAATGCCGCGCCGTTGGT
GGTTACCTTTCTGCTGCAGTATTCGTTGACCGTGGCGAGTATTTTTACCC
TCGGGCATTTGGGCAAGAAGGAGCTTGGGGCCGTTAGTTTGGCTAGTATG
AGTGCGAGTATTACGGGTTATGCTGGTATGTTGCTGTTTAGACCTTCCCT
TGGGTTTCTGATATTGATTGACTGTGTTCAGTTTACCAAGGTCTGGCGAC
GAGTTTGGATACCCTGTGTGCGCAGGCGTATGGCTCCGGGAGGAAGAAGC
TGGTAGGTCTGCAGATGCAAAAGATGGTCTTCTTCCTCTGGGCTATCTCC
ATACCTATTATTTTGTTGTGGTTCTTCGCCGACCGCATCCTCGTCCGGAT
CGTGCCGGAAAGAGAGGTCGCCATGCTGGCGGGCTTGTACTTGAAGGTGG
TTGCGCTGGGTGCTCCAGGGTACGCTTGCTTCGAGAGTGGCAAGCGGTTC
GTGCAGGCGCAGGGACTCTTCTCTGCCTCGCTTTATGTGCTTCTCATCTG
TGCCCCGTTGAATGCAGTGATGAACTACGTATTCGTATGGCAGTTCGGCT
GGGGCTTCATCGGAGCTCCCATCGCTGTAGCCATCACAGACAACCTGATG
CCTCTCTTCCTCTTCCTGTACGTGTACTTCATCGACGGCTCCGAATGCTG
GAACGGCGTCACCACCCGCGCCCTACGCAACTGGGGCCCCATGATCAAGC
TCGCCCTTCCCGGGCTCCTCATGGTCGAAGCCGAATGTCTCGCCTTTGAA
GTTCTGACCCTGGCGTCTTCGTATCTCGGCACCACCCCATTAGCCGCCCA
ATCCATCCTGTCCACCATCTCCAGCATCACCTTCCAAATCCCCTTCCCCG
TCTCCATCTCCGGTAGCACCCGCGTCGCCAACCTCATCGGCGCGACGCTT
GTCGACGCCGCCAAGCTATCCGCCAAGGTATCCATGATTGGCGCCGTCAT
CGTCGGGCTGCTGAACATGCTCCTCCTCTCTTCCCTGCGCTACTACATCC
CGTACCTGTTCACCTCGGACGAGGAGGTCATTGAGCTCGTCGCCCAGGTC
CTGCCTCTCTGTGCGGCGTTCCAGCTCTTTGATGCCTTGGCTGCCAACTG
TAACGGAATTCTGCGCGGTATCGGTCGCCAGGAAATTGGCGGCTATGTGC
AGCTGTTTTGCTACTATGCTATTGCTATGCCAATTAGTTTCGGCACGACA
TTTGGATTGAACTGGGGCTTGTTTGGACTGTGGTCTGGTGTTGCGTTGGC
CTTGTTATTGGTCTCGGTCATTGAGGCGTTCTTTTTGACGCAGACGAATT
GGCATCGCTCGGTGGAGGATGCGCTGCGCCGGAATGCGATGACTTGATAT
GTACCTGTTAGTGAATGTGTGTGATGATGTGATGTATTATGATATGAAGT
AGTGGAGTGAATGTACAAGATGATATCTCATCCCC
back to top

Coding sequence (CDS) from alignment at ch8:3520739..3523173+

>KJC3_012419-T1 ID=KJC3_012419-T1|Name=KJC3_012419-T1|organism=Aspergillus niger KJC3|type=CDS|length=3750bp|location=Sequence derived from alignment at ch8:3520739..3523173+ (Aspergillus niger KJC3)
ATGGCCCGCCGGAACAGCATACGCGGGATCACAGACGAGCAGCACGGCCG
GTATAGATCCAGCTCGCCGCTCGCCCGCACTGCCATCGCCCGCGATATTG
AAGACTACGCCGACGACGAAGGATCCATGCTCACCACCGACGACGAAGCC
TCCGAAACCTCCACCATCCGCGCCATTAACAGCCAGCCCGGCACGAATCC
CCATTCGCTGGCCGGGTCGTACCAGCGGCCCGGATTCTTCACTACCGTCT
CGCACGCGACGGTTGTGCCGCATCGGCCGGATAACGAGGGGTTAACGCGG
CGGGAGCGGGAGCGGGCCATTGAGGATGAGCGGAATCTTCTCACTGATAA
TCGATGCATTGAGCCGGGTGTGCAGAAGGGAGGGCGCATGAGACGCGGGT
CGGGTGTGGAAGCGACGGAGACGGCTGCATTGTTGGGCGGGCAGCGTCGC
GGATCACAGTATGAGACGGTTGAGGATCAGGAGGAGATTGATCGGAAGTG
GGAGGAGGCTGTTACCGCTGGGTTGATTCAGACGACGTGGAAGCGTGAAG
CTCAGGTCATTGGGAAGAATGCCGCGCCGTTGGTGGTTACCTTTCTGCTG
CAGTATTCGTTGACCGTGGCGAGTATTTTTACCCTCGGGCATTTGGGCAA
GAAGGAGCTTGGGGCCGTTAGTTTGGCTAGTATGAGTGCGAGTATTACGG
GTTATGCTGTTTACCAAGGTCTGGCGACGAGTTTGGATACCCTGTGTGCG
CAGGCGTATGGCTCCGGGAGGAAGAAGCTGGTAGGTCTGCAGATGCAAAA
GATGGTCTTCTTCCTCTGGGCTATCTCCATACCTATTATTTTGTTGTGGT
TCTTCGCCGACCGCATCCTCGTCCGGATCGTGCCGGAAAGAGAGGTCGCC
ATGCTGGCGGGCTTGTACTTGAAGGTGGTTGCGCTGGGTGCTCCAGGGTA
CGCTTGCTTCGAGAGTGGCAAGCGGTTCGTGCAGGCGCAGGGACTCTTCT
CTGCCTCGCTTTATGTGCTTCTCATCTGTGCCCCGTTGAATGCAGTGATG
AACTACGTATTCGTATGGCAGTTCGGCTGGGGCTTCATCGGAGCTCCCAT
CGCTGTAGCCATCACAGACAACCTGATGCCTCTCTTCCTCTTCCTGTACG
TGTACTTCATCGACGGCTCCGAATGCTGGAACGGCGTCACCACCCGCGCC
CTACGCAACTGGGGCCCCATGATCAAGCTCGCCCTTCCCGGGCTCCTCAT
GGTCGAAGCCGAATGTCTCGCCTTTGAAGTTCTGACCCTGGCGTCTTCGT
ATCTCGGCACCACCCCATTAGCCGCCCAATCCATCCTGTCCACCATCTCC
AGCATCACCTTCCAAATCCCCTTCCCCGTCTCCATCTCCGGTAGCACCCG
CGTCGCCAACCTCATCGGCGCGACGCTTGTCGACGCCGCCAAGCTATCCG
CCAAGGTATCCATGATTGGCGCCGTCATCGTCGGGCTGCTGAACATGCTC
CTCCTCTCTTCCCTGCGCTACTACATCCCGTACCTGTTCACCTCGGACGA
GGAGGTCATTGAGCTCGTCGCCCAGGTCCTGCCTCTCTGTGCGGCGTTCC
AGCTCTTTGATGCCTTGGCTGCCAACTGTAACGGAATTCTGCGCGGTATC
GGTCGCCAGGAAATTGGCGGCTATGTGCAGCTGTTTTGCTACTATGCTAT
TGCTATGCCAATTAGTTTCGGCACGACATTTGGATTGAACTGGGGCTTGT
TTGGACTGTGGTCTGGTGTTGCGTTGGCCTTGTTATTGGTCTCGGTCATT
GAGGCGTTCTTTTTGACGCAGACGAATTGGCATCGCTCGGTGGAGGATGC
GCTGCGCCGGAATGCGATGACTTGAATGGCCCGCCGGAACAGCATACGCG
GGATCACAGACGAGCAGCACGGCCGGTATAGATCCAGCTCGCCGCTCGCC
CGCACTGCCATCGCCCGCGATATTGAAGACTACGCCGACGACGAAGGATC
CATGCTCACCACCGACGACGAAGCCTCCGAAACCTCCACCATCCGCGCCA
TTAACAGCCAGCCCGGCACGAATCCCCATTCGCTGGCCGGGTCGTACCAG
CGGCCCGGATTCTTCACTACCGTCTCGCACGCGACGGTTGTGCCGCATCG
GCCGGATAACGAGGGGTTAACGCGGCGGGAGCGGGAGCGGGCCATTGAGG
ATGAGCGGAATCTTCTCACTGATAATCGATGCATTGAGCCGGGTGTGCAG
AAGGGAGGGCGCATGAGACGCGGGTCGGGTGTGGAAGCGACGGAGACGGC
TGCATTGTTGGGCGGGCAGCGTCGCGGATCACAGTATGAGACGGTTGAGG
ATCAGGAGGAGATTGATCGGAAGTGGGAGGAGGCTGTTACCGCTGGGTTG
ATTCAGACGACGTGGAAGCGTGAAGCTCAGGTCATTGGGAAGAATGCCGC
GCCGTTGGTGGTTACCTTTCTGCTGCAGTATTCGTTGACCGTGGCGAGTA
TTTTTACCCTCGGGCATTTGGGCAAGAAGGAGCTTGGGGCCGTTAGTTTG
GCTAGTATGAGTGCGAGTATTACGGGTTATGCTGTTTACCAAGGTCTGGC
GACGAGTTTGGATACCCTGTGTGCGCAGGCGTATGGCTCCGGGAGGAAGA
AGCTGGTAGGTCTGCAGATGCAAAAGATGGTCTTCTTCCTCTGGGCTATC
TCCATACCTATTATTTTGTTGTGGTTCTTCGCCGACCGCATCCTCGTCCG
GATCGTGCCGGAAAGAGAGGTCGCCATGCTGGCGGGCTTGTACTTGAAGG
TGGTTGCGCTGGGTGCTCCAGGGTACGCTTGCTTCGAGAGTGGCAAGCGG
TTCGTGCAGGCGCAGGGACTCTTCTCTGCCTCGCTTTATGTGCTTCTCAT
CTGTGCCCCGTTGAATGCAGTGATGAACTACGTATTCGTATGGCAGTTCG
GCTGGGGCTTCATCGGAGCTCCCATCGCTGTAGCCATCACAGACAACCTG
ATGCCTCTCTTCCTCTTCCTGTACGTGTACTTCATCGACGGCTCCGAATG
CTGGAACGGCGTCACCACCCGCGCCCTACGCAACTGGGGCCCCATGATCA
AGCTCGCCCTTCCCGGGCTCCTCATGGTCGAAGCCGAATGTCTCGCCTTT
GAAGTTCTGACCCTGGCGTCTTCGTATCTCGGCACCACCCCATTAGCCGC
CCAATCCATCCTGTCCACCATCTCCAGCATCACCTTCCAAATCCCCTTCC
CCGTCTCCATCTCCGGTAGCACCCGCGTCGCCAACCTCATCGGCGCGACG
CTTGTCGACGCCGCCAAGCTATCCGCCAAGGTATCCATGATTGGCGCCGT
CATCGTCGGGCTGCTGAACATGCTCCTCCTCTCTTCCCTGCGCTACTACA
TCCCGTACCTGTTCACCTCGGACGAGGAGGTCATTGAGCTCGTCGCCCAG
GTCCTGCCTCTCTGTGCGGCGTTCCAGCTCTTTGATGCCTTGGCTGCCAA
CTGTAACGGAATTCTGCGCGGTATCGGTCGCCAGGAAATTGGCGGCTATG
TGCAGCTGTTTTGCTACTATGCTATTGCTATGCCAATTAGTTTCGGCACG
ACATTTGGATTGAACTGGGGCTTGTTTGGACTGTGGTCTGGTGTTGCGTT
GGCCTTGTTATTGGTCTCGGTCATTGAGGCGTTCTTTTTGACGCAGACGA
ATTGGCATCGCTCGGTGGAGGATGCGCTGCGCCGGAATGCGATGACTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015297antiporter activity
GO:0042910xenobiotic transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012419KJC3_012419Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012419-T1.utr5p1KJC3_012419-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012419-T1.exon1KJC3_012419-T1.exon1Aspergillus niger KJC3exon
KJC3_012419-T1.exon2KJC3_012419-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012419-T1.cdsKJC3_012419-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012419-T1.utr3p1KJC3_012419-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012419-T1KJC3_012419-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002528
DBxrefPFAM:PF01554
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3520739..3523173 +
Powered by Drupal