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KJC3_012420-T1, KJC3_012420-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012420-T1
Unique NameKJC3_012420-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3523271..3524344-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012420-T1 ID=KJC3_012420-T1|Name=KJC3_012420-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1074bp|location=Sequence derived from alignment at ch8:3523271..3524344- (Aspergillus niger KJC3)
ATGGGTGAGTATATTCTGTTCGCACTCTATCGCATGACCCCTCTACCACA
ATAACCTTCCTTGCACCCCACCCTCCTCACCATACTCACCTCACGCGTCC
ACGCATCCCCAACTAACCACCCCTCCAGACGGCGGCTACAACAACTACAG
CAGCACCTACAGCGGCGGTGGTGGCGGCGGCGGCGGCTTCATGCCGGGCG
AGATGAACAACAGCCCATCCGGAGGAAAGGTACACTCACCAACCCCTCAC
CCCATCCCATCTATCCCATATCCCCCCCCCCCCCCACTAACAAGAAATTC
ATCATATAACAGTCCGACTACACCAACTCCACCCTCCGCCCCATAACCAT
CAAACAAGCTCTGGACGCAGTCCAGCCATACCCGGAAGCGCCCTACCAAA
TCGACTCCGCCGAAATCTCCAGCATCTGCTTCATCGGACAAGTACGCAAC
ATCAGCTCGCAAAGCACAAACGTCACATACAAGATCGACGACGGCACAGG
CGAGATCGAAGCCAAGCAATGGATCGACTCCATGACGGCCGACTCCATGG
ACACGGACGACATCAACAATACTAAGGCCGCCACCGGCAGGAGAGACGGT
AAGGTAGAGTTGAACGGGTACGCGAAGGTGTTCGGAAAGTTGAAGTCGTT
TGGGAATAAGAGGTTTGTGGGTGCGCATTGCGTCCGCCCTGTTAAGAGTC
TGGATGAGGTGCATTGTCATTTGTTGGAGGCGAGTGCTGTGCATTTGTTT
TTCACGAGGGGGCCGCCTGGGGGTGGTGCCTCTGGTGCTGGGGGAGTGGG
TGATGTGGGTGCTAAGGGGGATGCGGCAATGGGAGGTACAGGGGATGACT
ACGGGGCTGGAAAGAATCTGCCTGCTATGAGTCCTGTTGCGAAGAGAGTG
TATCAATTGCTTAGGACGGAGCCGCAGAGCAATGAGGGGTTGCATGCGCA
GTTGATTGCGGCGAAGCTGAGTTTGCCGATGCCGGATGTGGCCAGGGCGG
GAGATGAGTTGCTCACTGCGGGTGTGATCTTTTCGACAGTGGATGAGCAG
ACGTGGGCGATTTTGGAGTTTTAA
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Coding sequence (CDS) from alignment at ch8:3523271..3524344-

>KJC3_012420-T1 ID=KJC3_012420-T1|Name=KJC3_012420-T1|organism=Aspergillus niger KJC3|type=CDS|length=2601bp|location=Sequence derived from alignment at ch8:3523271..3524344- (Aspergillus niger KJC3)
TCCGACTACACCAACTCCACCCTCCGCCCCATAACCATCAAACAAGCTCT
GGACGCAGTCCAGCCATACCCGGAAGCGCCCTACCAAATCGACTCCGCCG
AAATCTCCAGCATCTGCTTCATCGGACAAGTACGCAACATCAGCTCGCAA
AGCACAAACGTCACATACAAGATCGACGACGGCACAGGCGAGATCGAAGC
CAAGCAATGGATCGACTCCATGACGGCCGACTCCATGGACACGGACGACA
TCAACAATACTAAGGCCGCCACCGGCAGGAGAGACGGTAAGGTAGAGTTG
AACGGGTACGCGAAGGTGTTCGGAAAGTTGAAGTCGTTTGGGAATAAGAG
GTTTGTGGGTGCGCATTGCGTCCGCCCTGTTAAGAGTCTGGATGAGGTGC
ATTGTCATTTGTTGGAGGCGAGTGCTGTGCATTTGTTTTTCACGAGGGGG
CCGCCTGGGGGTGGTGCCTCTGGTGCTGGGGGAGTGGGTGATGTGGGTGC
TAAGGGGGATGCGGCAATGGGAGGTACAGGGGATGACTACGGGGCTGGAA
AGAATCTGCCTGCTATGAGTCCTGTTGCGAAGAGAGTGTATCAATTGCTT
AGGACGGAGCCGCAGAGCAATGAGGGGTTGCATGCGCAGTTGATTGCGGC
GAAGCTGAGTTTGCCGATGCCGGATGTGGCCAGGGCGGGAGATGAGTTGC
TCACTGCGGGTGTGATCTTTTCGACAGTGGATGAGCAGACGTGGGCGATT
TTGGAGTTTTAAACGGCGGCTACAACAACTACAGCAGCACCTACAGCGGC
GGTGGTGGCGGCGGCGGCGGCTTCATGCCGGGCGAGATGAACAACAGCCC
ATCCGGAGGAAAGATGGTCCGACTACACCAACTCCACCCTCCGCCCCATA
ACCATCAAACAAGCTCTGGACGCAGTCCAGCCATACCCGGAAGCGCCCTA
CCAAATCGACTCCGCCGAAATCTCCAGCATCTGCTTCATCGGACAAGTAC
GCAACATCAGCTCGCAAAGCACAAACGTCACATACAAGATCGACGACGGC
ACAGGCGAGATCGAAGCCAAGCAATGGATCGACTCCATGACGGCCGACTC
CATGGACACGGACGACATCAACAATACTAAGGCCGCCACCGGCAGGAGAG
ACGGTAAGGTAGAGTTGAACGGGTACGCGAAGGTGTTCGGAAAGTTGAAG
TCGTTTGGGAATAAGAGGTTTGTGGGTGCGCATTGCGTCCGCCCTGTTAA
GAGTCTGGATGAGGTGCATTGTCATTTGTTGGAGGCGAGTGCTGTGCATT
TGTTTTTCACGAGGGGGCCGCCTGGGGGTGGTGCCTCTGGTGCTGGGGGA
GTGGGTGATGTGGGTGCTAAGGGGGATGCGGCAATGGGAGGTACAGGGGA
TGACTACGGGGCTGGAAAGAATCTGCCTGCTATGAGTCCTGTTGCGAAGA
GAGTGTATCAATTGCTTAGGACGGAGCCGCAGAGCAATGAGGGGTTGCAT
GCGCAGTTGATTGCGGCGAAGCTGAGTTTGCCGATGCCGGATGTGGCCAG
GGCGGGAGATGAGTTGCTCACTGCGGGTGTGATCTTTTCGACAGTGGATG
AGCAGACGTGGGCGATTTTGGAGTTTTAAACGGCGGCTACAACAACTACA
GCAGCACCTACAGCGGCGGTGGTGGCGGCGGCGGCGGCTTCATGCCGGGC
GAGATGAACAACAGCCCATCCGGAGGAAAGATGGTCCGACTACACCAACT
CCACCCTCCGCCCCATAACCATCAAACAAGCTCTGGACGCAGTCCAGCCA
TACCCGGAAGCGCCCTACCAAATCGACTCCGCCGAAATCTCCAGCATCTG
CTTCATCGGACAAGTACGCAACATCAGCTCGCAAAGCACAAACGTCACAT
ACAAGATCGACGACGGCACAGGCGAGATCGAAGCCAAGCAATGGATCGAC
TCCATGACGGCCGACTCCATGGACACGGACGACATCAACAATACTAAGGC
CGCCACCGGCAGGAGAGACGGTAAGGTAGAGTTGAACGGGTACGCGAAGG
TGTTCGGAAAGTTGAAGTCGTTTGGGAATAAGAGGTTTGTGGGTGCGCAT
TGCGTCCGCCCTGTTAAGAGTCTGGATGAGGTGCATTGTCATTTGTTGGA
GGCGAGTGCTGTGCATTTGTTTTTCACGAGGGGGCCGCCTGGGGGTGGTG
CCTCTGGTGCTGGGGGAGTGGGTGATGTGGGTGCTAAGGGGGATGCGGCA
ATGGGAGGTACAGGGGATGACTACGGGGCTGGAAAGAATCTGCCTGCTAT
GAGTCCTGTTGCGAAGAGAGTGTATCAATTGCTTAGGACGGAGCCGCAGA
GCAATGAGGGGTTGCATGCGCAGTTGATTGCGGCGAAGCTGAGTTTGCCG
ATGCCGGATGTGGCCAGGGCGGGAGATGAGTTGCTCACTGCGGGTGTGAT
CTTTTCGACAGTGGATGAGCAGACGTGGGCGATTTTGGAGTTTTAAACGG
CGGCTACAACAACTACAGCAGCACCTACAGCGGCGGTGGTGGCGGCGGCG
GCGGCTTCATGCCGGGCGAGATGAACAACAGCCCATCCGGAGGAAAGATG
G
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
GO:0006260DNA replication
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012420KJC3_012420Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012420-T1KJC3_012420-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012420-T1.cdsKJC3_012420-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012420-T1.exon3KJC3_012420-T1.exon3Aspergillus niger KJC3exon
KJC3_012420-T1.exon2KJC3_012420-T1.exon2Aspergillus niger KJC3exon
KJC3_012420-T1.exon1KJC3_012420-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR014646
DBxrefInterPro:IPR014892
DBxrefInterPro:IPR036388
DBxrefPFAM:PF08784
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3523271..3524344 -
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