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KJC3_012421-T1, KJC3_012421-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012421-T1
Unique NameKJC3_012421-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3524636..3527434+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012421-T1 ID=KJC3_012421-T1|Name=KJC3_012421-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2799bp|location=Sequence derived from alignment at ch8:3524636..3527434+ (Aspergillus niger KJC3)
ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACAT
CACCAATGCGCTGTTTCAAAATGACAGCGACTCCGACAACGAGGCCCCCG
CGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT
TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTAT
CGCGGAGACGCAGGCGTCTGCGAACCGAAAGGCGTCGAATTTGAAGGGTC
GCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC
TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCA
GCGCAAGACGATCCCAGTGGTTATGGAGGATCAGGATGTCGTGGGCATGG
CGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG
AAGTTGAAGAGCCATAGCACCCAGGTTGGAGCCCGTGGGCTGATCTTGTC
GCCGTCGCGTGAGTTGGCGCTGCAGACTTTGAAGGTCGTGAAGGAGCTTG
GTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTTTG
GAGGAACAGTTCTCGATGATGGCTGGTAACCCCGATATTGTGATTGCGAC
GCCCGGTCGGTTCCTGCACTTGAAGGTCGAAATGAACCTCGATTTGTCGA
GTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT
TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGCCA
GACCCTGCTTTTCTCGGCTACCCTTCCCAAATCCCTGGTGGAATTCGCGC
GCGCTGGTCTGCAGGAGCCTACGCTCGTTCGTTTGGATACTGAGAGCAAG
ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAA
GGAGGGCGCGCTGATGTATATCCTCCACAACGTGATTAAGATGCCTACGG
GTCCGACGGAGGCCGCGCAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG
AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAA
CTTTAAGGAGTCGCCCACGAAGCATTCCACGATCATTTTCGCCGCTACCA
AGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG
ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGT
GCACAACTTCCGTACCGGCATTTCGAACATCCTGGTCGTCACTGACGTCG
CAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC
TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCG
TGCTGGCCGCACCGGTTGGAGTTACAGTCTGGTCCGCGATTCCGATGCCC
CCTATCTGCTCGATCTGCAGCTGTTCCTCGGCCGGCGACTGGTCCTCGGC
CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGG
CTTCCCCCGCGACGGCCTGTCTCAGAGCTGCGAGTGGGTGAACAAGGTCT
TGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT
GAAAAGCTCTACTTGCGCACGCGTAACGCCGCGTCTCTGGAGAGTGCCAA
GCGCTCGAAAGAGGTCGTTTCATCCGACAATTGGACGGCCCTGCACCCCC
TGTTCAACGACGAGACCAGTCAACTCGAAGCCGAGCGCGAGAAGATGCTG
GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAA
CCGCCGCAGCGGCAAGCCCGAGAACGAGGAGGCGCTCACGACAATCAAGC
GCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA
TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGC
CGACGACGCCGAAGATGGTGCCTTCTCCGACGAAGACGAAGCCGGCGAAG
GCGCCGCCGACAACATGTCACTTGCATCGGAATCCGACCTCGAAGTTACC
TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCGG
TGCCACCTCCTTCCAGAACCCCGAATACTTCATGTCCTACACCCCCAACA
ACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC
GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGA
TGAAGGCAGCCGCGGGTTCGGCGAGCCTCGCACCATGATGCGCTGGGACA
AGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG
GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTT
CCGCAGTGGACGCTTCGACGCCTGGAAGAAGGGCAAGCGACTGACTCGTC
TGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC
CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAA
GCGGGCTGATCCGCTCCGCGGAGATTATGATAAGATGAAGAAGAAGAATG
AGGCGGCCAAGGAGCGCCAGTTGGGTAAGTTCGGAGGAGCCGCTGCGGGC
GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTT
GAAGCAGAAGAGACGCGAGAAGAATGCTCGACCGTCGAGGAAGAAGTAG
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Coding sequence (CDS) from alignment at ch8:3524636..3527434+

>KJC3_012421-T1 ID=KJC3_012421-T1|Name=KJC3_012421-T1|organism=Aspergillus niger KJC3|type=CDS|length=2799bp|location=Sequence derived from alignment at ch8:3524636..3527434+ (Aspergillus niger KJC3)
ATGCCTGGTCGTGCCGCTTCTCCGGCCATGTCGGAGAATGAATTCGACAT
CACCAATGCGCTGTTTCAAAATGACAGCGACTCCGACAACGAGGCCCCCG
CGAAGCAAGCCAAGCGACAACCGAAGGCGGCGGCTCCCCAGCAGCTCGAT
TTTCTGAACGGCGGCGGCGATGACGACGACGAAGATGACGAGGCGTTTAT
CGCGGAGACGCAGGCGTCTGCGAACCGAAAGGCGTCGAATTTGAAGGGTC
GCACGGTGAAGAAGGGTGGTGGTTTCCAGGCCATGGGGCTGAATGCGAAC
TTGTTGAAGGCCATCACAAGGAAGGGTTTCTCGGTGCCGACACCTATTCA
GCGCAAGACGATCCCAGTGGTTATGGAGGATCAGGATGTCGTGGGCATGG
CGCGCACGGGTTCCGGAAAGACCGCTGCGTTCGTCATTCCCATGATTCAG
AAGTTGAAGAGCCATAGCACCCAGGTTGGAGCCCGTGGGCTGATCTTGTC
GCCGTCGCGTGAGTTGGCGCTGCAGACTTTGAAGGTCGTGAAGGAGCTTG
GTAAGGGGACGGATCTCAAGGCGGTGTTGTTGGTTGGTGGTGATAGTTTG
GAGGAACAGTTCTCGATGATGGCTGGTAACCCCGATATTGTGATTGCGAC
GCCCGGTCGGTTCCTGCACTTGAAGGTCGAAATGAACCTCGATTTGTCGA
GTATCCGTTATGTTGTGTTCGATGAGGCCGATCGCCTGTTCGAAATGGGT
TTCGCTGCTCAGTTGACCGAAATTCTTCACGGCTTGCCGTCTACTCGCCA
GACCCTGCTTTTCTCGGCTACCCTTCCCAAATCCCTGGTGGAATTCGCGC
GCGCTGGTCTGCAGGAGCCTACGCTCGTTCGTTTGGATACTGAGAGCAAG
ATCTCGCCGGATCTGCAGAATGCGTTCTTCTCTGTCAAGTCCGGAGACAA
GGAGGGCGCGCTGATGTATATCCTCCACAACGTGATTAAGATGCCTACGG
GTCCGACGGAGGCCGCGCAGCGCATGAAGGAAGAGAACGCCAGTGGAAAG
AGCTCGAAGTTCTCGAAGAAGCGGAAGCGATCGGACGACAAAGCAATCAA
CTTTAAGGAGTCGCCCACGAAGCATTCCACGATCATTTTCGCCGCTACCA
AGCACCACGTCGACTACTTGTACTCTCTGCTGAACGAAGCCGGATTTGCG
ACATCCTACGCTTACGGTTCCCTCGACCAGACGGCTCGTAAAATCCAAGT
GCACAACTTCCGTACCGGCATTTCGAACATCCTGGTCGTCACTGACGTCG
CAGCCAGAGGTATCGATATTCCCATTCTGGCCAATGTCATCAACTACGAC
TTTCCCTCCCAAGCCAAGATCTTCGTCCACCGTGTCGGTCGTACCGCGCG
TGCTGGCCGCACCGGTTGGAGTTACAGTCTGGTCCGCGATTCCGATGCCC
CCTATCTGCTCGATCTGCAGCTGTTCCTCGGCCGGCGACTGGTCCTCGGC
CGGGAGCATGGCGACCAAGTCAACTTCGCCGAGGATGTGGTCGTCGGAGG
CTTCCCCCGCGACGGCCTGTCTCAGAGCTGCGAGTGGGTGAACAAGGTCT
TGGACGATACGGTAGATATCGCCGCGCAGCGTTCCGTCGCCAGCAAGGGT
GAAAAGCTCTACTTGCGCACGCGTAACGCCGCGTCTCTGGAGAGTGCCAA
GCGCTCGAAAGAGGTCGTTTCATCCGACAATTGGACGGCCCTGCACCCCC
TGTTCAACGACGAGACCAGTCAACTCGAAGCCGAGCGCGAGAAGATGCTG
GCCCGCATCGGAGGCTACCGGCCGAATGAGACTATCTTCGAAGTGAACAA
CCGCCGCAGCGGCAAGCCCGAGAACGAGGAGGCGCTCACGACAATCAAGC
GCGTCCGAACCACGCTCGACTCGAAGAAGAAGCGCGCCCAGGAAGCGAAA
TCGGAATTCGTCGACGACGACGTCCCCACCAAGTCCGGAGACGCTGACGC
CGACGACGCCGAAGATGGTGCCTTCTCCGACGAAGACGAAGCCGGCGAAG
GCGCCGCCGACAACATGTCACTTGCATCGGAATCCGACCTCGAAGTTACC
TTCTCCTCCTACAACCAGCCCAGCAATAAGAAGGCCAAGAAAGAAGCCGG
TGCCACCTCCTTCCAGAACCCCGAATACTTCATGTCCTACACCCCCAACA
ACACCAACATGGCCGAAGACCGCGCGTACGGTGTGCACTCCGGCACCAAC
GCCAACTTCGCACAGGCATCCCGCGACGCAGCCATGGATCTGCTCGGCGA
TGAAGGCAGCCGCGGGTTCGGCGAGCCTCGCACCATGATGCGCTGGGACA
AGCGTCACAAGAAGTACGTGTCGCGACAGAACGACGAGGACGGATCGAAG
GGTACTCGTCTGGTGCGTGGTGAGAGTGGTGCCAAGATCGCCGCCAGCTT
CCGCAGTGGACGCTTCGACGCCTGGAAGAAGGGCAAGCGACTGACTCGTC
TGCCGCGTGTGGGTGAGGCCGAGACACCGGGTCTGGGGGCGGACCTGAAC
CACTACCGCGGTGGTAGACGCTTCAAGCATAACAAGGAGCAGGCGCCGAA
GCGGGCTGATCCGCTCCGCGGAGATTATGATAAGATGAAGAAGAAGAATG
AGGCGGCCAAGGAGCGCCAGTTGGGTAAGTTCGGAGGAGCCGCTGCGGGC
GGTAAGAGTGAGCTGAAGGGTACGGATGATATTCGGTTAGCCAGGAATTT
GAAGCAGAAGAGACGCGAGAAGAATGCTCGACCGTCGAGGAAGAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0003724RNA helicase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP10KJC3_012421Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012421-T1.exon1KJC3_012421-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012421-T1.cdsKJC3_012421-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012421-T1KJC3_012421-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR012541
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
DBxrefPFAM:PF08147
ProductATP-dependent RNA helicase dbp10
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3524636..3527434 +
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