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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3550333..3552297- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012428-T1 ID=KJC3_012428-T1|Name=KJC3_012428-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1965bp|location=Sequence derived from alignment at ch8:3550333..3552297- (Aspergillus niger KJC3)
ATGGGTGTTCATGACATCGAAAAGCAACGCCCTATGGCTCCTGGCGAGCC
CATAGCTGAGCGTAATGCCAAGGACCCCAGCACCTTAGCAACCGATTATC
TGGAGCCAGGGGCTCCCTATGTCAATGCGAATAAGCTGGCTCGGAAGCTC
TCTCCCCGCCAGGTGCAGATGATCGCCATCGGCGGCACCATTGGTACGGG
TCTGTTCCTGGGAACGGGTAAGGCGCTGGCCACCGGTGGGCCGGCCTCGA
TGCTGATCTCTTATACGATCTGTGGTGTGATTGTATTCATTACTATGTTG
TCGCTGGGTGAGATGGCGGCGTTTATCCCTGTTGCCGGGTCGTTCTGTAC
CTTTGCTGGGTGAGTTTCTGTTCGAACTTGATTGGCAGTGAGGATGATAT
GCTGATGGTGAGATAGTCGGTTCGTTGATGATGCTTTGGGCTTTGCTCTT
ACCTGGAACTACTGGTTCAATGATGCGGTGTCAACTGCGTCGGATATTAT
TGCGCTGCAGTTGCTGCTGGAGTATTGGACGGATAACTTCCCGGGATGGG
CGATAAGCTTGATCTTTTTGGTCGTGGTTATTGCGCTGAATATGCTTTCG
GTCAAGGTTTATGGCGAGGTTAGTTGCTAGTTGCTATCATTCAATTGACA
TGCATATACTGACTATCTGTCTTTGAATACTGGCTCAGTCTTCTCAAAGT
GGTGACTATCATCGTATGTCCCCCTACTTGAACCAACCTGTGTCACTCCA
TACTAAACCAACCACCAGATCTTCATCATCCTCGGTATTGTTGTAAACTG
CGGCGCAAACACCCAACACAAATATATCGGAAACAAGTACTTTTACACTG
GAGAGGCCCCCTTCGTCGGAGGTATTGGCGGCTTCGCCTCTGTCTTCGTC
ACAGCCTCTTTCGCCTAGTACGTTTACCCTCCACCATTGAAAAGCTCCAT
ACTGACCAACTCACAGCGGCGGCACCGAATCCATCGCCATCACCGCCGGT
GAAACCAAAGACCCCGCTAAGAATCTCCCCCGTGTCGTCCGCAACGTCTT
CTGGCGTATCATCCTCTTCTACATCGTCTCAATCGTCCTCATCGGCCTCG
ACGTCCCCTACAACTACCCGAACCTATCCTCCGAAACTACCGCCACGAGT
CCCTTCACCATCGTCTTCGTTGAAGCCGGCAGCGCCGTCGCCGGCAGTTT
CATCAACGCCGTAATCATGACCAGCGTCATCTCCGCCGCCAACCACGCCC
TCTTCGCCGGCTCTCGACTTCTCTACACCCTCGCCGTAGACGGCTACGCC
CCCCGCTTCTTCGGCCACCTGAACCGATTCCAAGTCCCCTGGGTAGCGGT
CCTCGCTACCTCTGTTATCAGTGGCCTCTGCTTCGGAGCGAGCTACATTG
GCGCCGGCCAGTTATGGTCGTGGCTGCAGAAGTAAGCCATCCCTCGCTCC
CAAAGTATCCTAATAACTAGTACTAATAACTATATAGTATCGTCGGTGTC
TCCAACCAACTCTCCTGGACCTTTATCGGTCTCGCCTCCCTCCGCTTCCG
CGCCGCAATCCGCAAACAGAACCTGGAACATCTCCTTCCCTACAAGAACT
GGACGTATCCCGTGGGACCGGTTCTTGCCATAGGACTGAATATCATTCTG
ATTCTGGTTCAGGGTTGGTCGTGCTTTAGCCCGCATTTCAAGGCCGTGGA
TTTCGTCTCGTATTATATCGAGTTGCCGATCATGCTGGTGATGTTCTTGG
TGTGGAAGTTGGTGAAGAGGACGAAGTTGGTGAAATTGGAGGTTATGGAT
TTGGTTACCGATCGATATAATCTGGAGGTTGTTGGGGGGAGGGAGGTGGA
GGAAGATGATGGGGACGGTAGTAATAATGGGGAGGGTGATGGGGATGGGG
GATGGAGGAGTGAGAAGGGGGTTGTGGGGAAGGTGAAGAAGGTGGGGATG
TGGTTGTTTCTGTGA back to topCoding sequence (CDS) from alignment at ch8:3550333..3552297- >KJC3_012428-T1 ID=KJC3_012428-T1|Name=KJC3_012428-T1|organism=Aspergillus niger KJC3|type=CDS|length=8265bp|location=Sequence derived from alignment at ch8:3550333..3552297- (Aspergillus niger KJC3)
TATCGTCGGTGTCTCCAACCAACTCTCCTGGACCTTTATCGGTCTCGCCT
CCCTCCGCTTCCGCGCCGCAATCCGCAAACAGAACCTGGAACATCTCCTT
CCCTACAAGAACTGGACGTATCCCGTGGGACCGGTTCTTGCCATAGGACT
GAATATCATTCTGATTCTGGTTCAGGGTTGGTCGTGCTTTAGCCCGCATT
TCAAGGCCGTGGATTTCGTCTCGTATTATATCGAGTTGCCGATCATGCTG
GTGATGTTCTTGGTGTGGAAGTTGGTGAAGAGGACGAAGTTGGTGAAATT
GGAGGTTATGGATTTGGTTACCGATCGATATAATCTGGAGGTTGTTGGGG
GGAGGGAGGTGGAGGAAGATGATGGGGACGGTAGTAATAATGGGGAGGGT
GATGGGGATGGGGGATGGAGGAGTGAGAAGGGGGTTGTGGGGAAGGTGAA
GAAGGTGGGGATGTGGTTGTTTCTGTGACGGCGGCACCGAATCCATCGCC
ATCACCGCCGGTGAAACCAAAGACCCCGCTAAGAATCTCCCCCGTGTCGT
CCGCAACGTCTTCTGGCGTATCATCCTCTTCTACATCGTCTCAATCGTCC
TCATCGGCCTCGACGTCCCCTACAACTACCCGAACCTATCCTCCGAAACT
ACCGCCACGAGTCCCTTCACCATCGTCTTCGTTGAAGCCGGCAGCGCCGT
CGCCGGCAGTTTCATCAACGCCGTAATCATGACCAGCGTCATCTCCGCCG
CCAACCACGCCCTCTTCGCCGGCTCTCGACTTCTCTACACCCTCGCCGTA
GACGGCTACGCCCCCCGCTTCTTCGGCCACCTGAACCGATTCCAAGTCCC
CTGGGTAGCGGTCCTCGCTACCTCTGTTATCAGTGGCCTCTGCTTCGGAG
CGAGCTACATTGGCGCCGGCCAGTTATGGTCGTGGCTGCAGAAATCTTCA
TCATCCTCGGTATTGTTGTAAACTGCGGCGCAAACACCCAACACAAATAT
ATCGGAAACAAGTACTTTTACACTGGAGAGGCCCCCTTCGTCGGAGGTAT
TGGCGGCTTCGCCTCTGTCTTCGTCACAGCCTCTTTCGCCTATCGGTTCG
TTGATGATGCTTTGGGCTTTGCTCTTACCTGGAACTACTGGTTCAATGAT
GCGGTGTCAACTGCGTCGGATATTATTGCGCTGCAGTTGCTGCTGGAGTA
TTGGACGGATAACTTCCCGGGATGGGCGATAAGCTTGATCTTTTTGGTCG
TGGTTATTGCGCTGAATATGCTTTCGGTCAAGGTTTATGGCGAGATGGGT
GTTCATGACATCGAAAAGCAACGCCCTATGGCTCCTGGCGAGCCCATAGC
TGAGCGTAATGCCAAGGACCCCAGCACCTTAGCAACCGATTATCTGGAGC
CAGGGGCTCCCTATGTCAATGCGAATAAGCTGGCTCGGAAGCTCTCTCCC
CGCCAGGTGCAGATGATCGCCATCGGCGGCACCATTGGTACGGGTCTGTT
CCTGGGAACGGGTAAGGCGCTGGCCACCGGTGGGCCGGCCTCGATGCTGA
TCTCTTATACGATCTGTGGTGTGATTGTATTCATTACTATGTTGTCGCTG
GGTGAGATGGCGGCGTTTATCCCTGTTGCCGGGTCGTTCTGTACCTTTGC
TGGTATCGTCGGTGTCTCCAACCAACTCTCCTGGACCTTTATCGGTCTCG
CCTCCCTCCGCTTCCGCGCCGCAATCCGCAAACAGAACCTGGAACATCTC
CTTCCCTACAAGAACTGGACGTATCCCGTGGGACCGGTTCTTGCCATAGG
ACTGAATATCATTCTGATTCTGGTTCAGGGTTGGTCGTGCTTTAGCCCGC
ATTTCAAGGCCGTGGATTTCGTCTCGTATTATATCGAGTTGCCGATCATG
CTGGTGATGTTCTTGGTGTGGAAGTTGGTGAAGAGGACGAAGTTGGTGAA
ATTGGAGGTTATGGATTTGGTTACCGATCGATATAATCTGGAGGTTGTTG
GGGGGAGGGAGGTGGAGGAAGATGATGGGGACGGTAGTAATAATGGGGAG
GGTGATGGGGATGGGGGATGGAGGAGTGAGAAGGGGGTTGTGGGGAAGGT
GAAGAAGGTGGGGATGTGGTTGTTTCTGTGACGGCGGCACCGAATCCATC
GCCATCACCGCCGGTGAAACCAAAGACCCCGCTAAGAATCTCCCCCGTGT
CGTCCGCAACGTCTTCTGGCGTATCATCCTCTTCTACATCGTCTCAATCG
TCCTCATCGGCCTCGACGTCCCCTACAACTACCCGAACCTATCCTCCGAA
ACTACCGCCACGAGTCCCTTCACCATCGTCTTCGTTGAAGCCGGCAGCGC
CGTCGCCGGCAGTTTCATCAACGCCGTAATCATGACCAGCGTCATCTCCG
CCGCCAACCACGCCCTCTTCGCCGGCTCTCGACTTCTCTACACCCTCGCC
GTAGACGGCTACGCCCCCCGCTTCTTCGGCCACCTGAACCGATTCCAAGT
CCCCTGGGTAGCGGTCCTCGCTACCTCTGTTATCAGTGGCCTCTGCTTCG
GAGCGAGCTACATTGGCGCCGGCCAGTTATGGTCGTGGCTGCAGAAATCT
TCATCATCCTCGGTATTGTTGTAAACTGCGGCGCAAACACCCAACACAAA
TATATCGGAAACAAGTACTTTTACACTGGAGAGGCCCCCTTCGTCGGAGG
TATTGGCGGCTTCGCCTCTGTCTTCGTCACAGCCTCTTTCGCCTATCGGT
TCGTTGATGATGCTTTGGGCTTTGCTCTTACCTGGAACTACTGGTTCAAT
GATGCGGTGTCAACTGCGTCGGATATTATTGCGCTGCAGTTGCTGCTGGA
GTATTGGACGGATAACTTCCCGGGATGGGCGATAAGCTTGATCTTTTTGG
TCGTGGTTATTGCGCTGAATATGCTTTCGGTCAAGGTTTATGGCGAGATG
GGTGTTCATGACATCGAAAAGCAACGCCCTATGGCTCCTGGCGAGCCCAT
AGCTGAGCGTAATGCCAAGGACCCCAGCACCTTAGCAACCGATTATCTGG
AGCCAGGGGCTCCCTATGTCAATGCGAATAAGCTGGCTCGGAAGCTCTCT
CCCCGCCAGGTGCAGATGATCGCCATCGGCGGCACCATTGGTACGGGTCT
GTTCCTGGGAACGGGTAAGGCGCTGGCCACCGGTGGGCCGGCCTCGATGC
TGATCTCTTATACGATCTGTGGTGTGATTGTATTCATTACTATGTTGTCG
CTGGGTGAGATGGCGGCGTTTATCCCTGTTGCCGGGTCGTTCTGTACCTT
TGCTGGTATCGTCGGTGTCTCCAACCAACTCTCCTGGACCTTTATCGGTC
TCGCCTCCCTCCGCTTCCGCGCCGCAATCCGCAAACAGAACCTGGAACAT
CTCCTTCCCTACAAGAACTGGACGTATCCCGTGGGACCGGTTCTTGCCAT
AGGACTGAATATCATTCTGATTCTGGTTCAGGGTTGGTCGTGCTTTAGCC
CGCATTTCAAGGCCGTGGATTTCGTCTCGTATTATATCGAGTTGCCGATC
ATGCTGGTGATGTTCTTGGTGTGGAAGTTGGTGAAGAGGACGAAGTTGGT
GAAATTGGAGGTTATGGATTTGGTTACCGATCGATATAATCTGGAGGTTG
TTGGGGGGAGGGAGGTGGAGGAAGATGATGGGGACGGTAGTAATAATGGG
GAGGGTGATGGGGATGGGGGATGGAGGAGTGAGAAGGGGGTTGTGGGGAA
GGTGAAGAAGGTGGGGATGTGGTTGTTTCTGTGACGGCGGCACCGAATCC
ATCGCCATCACCGCCGGTGAAACCAAAGACCCCGCTAAGAATCTCCCCCG
TGTCGTCCGCAACGTCTTCTGGCGTATCATCCTCTTCTACATCGTCTCAA
TCGTCCTCATCGGCCTCGACGTCCCCTACAACTACCCGAACCTATCCTCC
GAAACTACCGCCACGAGTCCCTTCACCATCGTCTTCGTTGAAGCCGGCAG
CGCCGTCGCCGGCAGTTTCATCAACGCCGTAATCATGACCAGCGTCATCT
CCGCCGCCAACCACGCCCTCTTCGCCGGCTCTCGACTTCTCTACACCCTC
GCCGTAGACGGCTACGCCCCCCGCTTCTTCGGCCACCTGAACCGATTCCA
AGTCCCCTGGGTAGCGGTCCTCGCTACCTCTGTTATCAGTGGCCTCTGCT
TCGGAGCGAGCTACATTGGCGCCGGCCAGTTATGGTCGTGGCTGCAGAAA
TCTTCATCATCCTCGGTATTGTTGTAAACTGCGGCGCAAACACCCAACAC
AAATATATCGGAAACAAGTACTTTTACACTGGAGAGGCCCCCTTCGTCGG
AGGTATTGGCGGCTTCGCCTCTGTCTTCGTCACAGCCTCTTTCGCCTATC
GGTTCGTTGATGATGCTTTGGGCTTTGCTCTTACCTGGAACTACTGGTTC
AATGATGCGGTGTCAACTGCGTCGGATATTATTGCGCTGCAGTTGCTGCT
GGAGTATTGGACGGATAACTTCCCGGGATGGGCGATAAGCTTGATCTTTT
TGGTCGTGGTTATTGCGCTGAATATGCTTTCGGTCAAGGTTTATGGCGAG
ATGGGTGTTCATGACATCGAAAAGCAACGCCCTATGGCTCCTGGCGAGCC
CATAGCTGAGCGTAATGCCAAGGACCCCAGCACCTTAGCAACCGATTATC
TGGAGCCAGGGGCTCCCTATGTCAATGCGAATAAGCTGGCTCGGAAGCTC
TCTCCCCGCCAGGTGCAGATGATCGCCATCGGCGGCACCATTGGTACGGG
TCTGTTCCTGGGAACGGGTAAGGCGCTGGCCACCGGTGGGCCGGCCTCGA
TGCTGATCTCTTATACGATCTGTGGTGTGATTGTATTCATTACTATGTTG
TCGCTGGGTGAGATGGCGGCGTTTATCCCTGTTGCCGGGTCGTTCTGTAC
CTTTGCTGGTATCGTCGGTGTCTCCAACCAACTCTCCTGGACCTTTATCG
GTCTCGCCTCCCTCCGCTTCCGCGCCGCAATCCGCAAACAGAACCTGGAA
CATCTCCTTCCCTACAAGAACTGGACGTATCCCGTGGGACCGGTTCTTGC
CATAGGACTGAATATCATTCTGATTCTGGTTCAGGGTTGGTCGTGCTTTA
GCCCGCATTTCAAGGCCGTGGATTTCGTCTCGTATTATATCGAGTTGCCG
ATCATGCTGGTGATGTTCTTGGTGTGGAAGTTGGTGAAGAGGACGAAGTT
GGTGAAATTGGAGGTTATGGATTTGGTTACCGATCGATATAATCTGGAGG
TTGTTGGGGGGAGGGAGGTGGAGGAAGATGATGGGGACGGTAGTAATAAT
GGGGAGGGTGATGGGGATGGGGGATGGAGGAGTGAGAAGGGGGTTGTGGG
GAAGGTGAAGAAGGTGGGGATGTGGTTGTTTCTGTGACGGCGGCACCGAA
TCCATCGCCATCACCGCCGGTGAAACCAAAGACCCCGCTAAGAATCTCCC
CCGTGTCGTCCGCAACGTCTTCTGGCGTATCATCCTCTTCTACATCGTCT
CAATCGTCCTCATCGGCCTCGACGTCCCCTACAACTACCCGAACCTATCC
TCCGAAACTACCGCCACGAGTCCCTTCACCATCGTCTTCGTTGAAGCCGG
CAGCGCCGTCGCCGGCAGTTTCATCAACGCCGTAATCATGACCAGCGTCA
TCTCCGCCGCCAACCACGCCCTCTTCGCCGGCTCTCGACTTCTCTACACC
CTCGCCGTAGACGGCTACGCCCCCCGCTTCTTCGGCCACCTGAACCGATT
CCAAGTCCCCTGGGTAGCGGTCCTCGCTACCTCTGTTATCAGTGGCCTCT
GCTTCGGAGCGAGCTACATTGGCGCCGGCCAGTTATGGTCGTGGCTGCAG
AAATCTTCATCATCCTCGGTATTGTTGTAAACTGCGGCGCAAACACCCAA
CACAAATATATCGGAAACAAGTACTTTTACACTGGAGAGGCCCCCTTCGT
CGGAGGTATTGGCGGCTTCGCCTCTGTCTTCGTCACAGCCTCTTTCGCCT
ATCGGTTCGTTGATGATGCTTTGGGCTTTGCTCTTACCTGGAACTACTGG
TTCAATGATGCGGTGTCAACTGCGTCGGATATTATTGCGCTGCAGTTGCT
GCTGGAGTATTGGACGGATAACTTCCCGGGATGGGCGATAAGCTTGATCT
TTTTGGTCGTGGTTATTGCGCTGAATATGCTTTCGGTCAAGGTTTATGGC
GAGATGGGTGTTCATGACATCGAAAAGCAACGCCCTATGGCTCCTGGCGA
GCCCATAGCTGAGCGTAATGCCAAGGACCCCAGCACCTTAGCAACCGATT
ATCTGGAGCCAGGGGCTCCCTATGTCAATGCGAATAAGCTGGCTCGGAAG
CTCTCTCCCCGCCAGGTGCAGATGATCGCCATCGGCGGCACCATTGGTAC
GGGTCTGTTCCTGGGAACGGGTAAGGCGCTGGCCACCGGTGGGCCGGCCT
CGATGCTGATCTCTTATACGATCTGTGGTGTGATTGTATTCATTACTATG
TTGTCGCTGGGTGAGATGGCGGCGTTTATCCCTGTTGCCGGGTCGTTCTG
TACCTTTGCTGGTATCGTCGGTGTCTCCAACCAACTCTCCTGGACCTTTA
TCGGTCTCGCCTCCCTCCGCTTCCGCGCCGCAATCCGCAAACAGAACCTG
GAACATCTCCTTCCCTACAAGAACTGGACGTATCCCGTGGGACCGGTTCT
TGCCATAGGACTGAATATCATTCTGATTCTGGTTCAGGGTTGGTCGTGCT
TTAGCCCGCATTTCAAGGCCGTGGATTTCGTCTCGTATTATATCGAGTTG
CCGATCATGCTGGTGATGTTCTTGGTGTGGAAGTTGGTGAAGAGGACGAA
GTTGGTGAAATTGGAGGTTATGGATTTGGTTACCGATCGATATAATCTGG
AGGTTGTTGGGGGGAGGGAGGTGGAGGAAGATGATGGGGACGGTAGTAAT
AATGGGGAGGGTGATGGGGATGGGGGATGGAGGAGTGAGAAGGGGGTTGT
GGGGAAGGTGAAGAAGGTGGGGATGTGGTTGTTTCTGTGACGGCGGCACC
GAATCCATCGCCATCACCGCCGGTGAAACCAAAGACCCCGCTAAGAATCT
CCCCCGTGTCGTCCGCAACGTCTTCTGGCGTATCATCCTCTTCTACATCG
TCTCAATCGTCCTCATCGGCCTCGACGTCCCCTACAACTACCCGAACCTA
TCCTCCGAAACTACCGCCACGAGTCCCTTCACCATCGTCTTCGTTGAAGC
CGGCAGCGCCGTCGCCGGCAGTTTCATCAACGCCGTAATCATGACCAGCG
TCATCTCCGCCGCCAACCACGCCCTCTTCGCCGGCTCTCGACTTCTCTAC
ACCCTCGCCGTAGACGGCTACGCCCCCCGCTTCTTCGGCCACCTGAACCG
ATTCCAAGTCCCCTGGGTAGCGGTCCTCGCTACCTCTGTTATCAGTGGCC
TCTGCTTCGGAGCGAGCTACATTGGCGCCGGCCAGTTATGGTCGTGGCTG
CAGAAATCTTCATCATCCTCGGTATTGTTGTAAACTGCGGCGCAAACACC
CAACACAAATATATCGGAAACAAGTACTTTTACACTGGAGAGGCCCCCTT
CGTCGGAGGTATTGGCGGCTTCGCCTCTGTCTTCGTCACAGCCTCTTTCG
CCTATCGGTTCGTTGATGATGCTTTGGGCTTTGCTCTTACCTGGAACTAC
TGGTTCAATGATGCGGTGTCAACTGCGTCGGATATTATTGCGCTGCAGTT
GCTGCTGGAGTATTGGACGGATAACTTCCCGGGATGGGCGATAAGCTTGA
TCTTTTTGGTCGTGGTTATTGCGCTGAATATGCTTTCGGTCAAGGTTTAT
GGCGAGATGGGTGTTCATGACATCGAAAAGCAACGCCCTATGGCTCCTGG
CGAGCCCATAGCTGAGCGTAATGCCAAGGACCCCAGCACCTTAGCAACCG
ATTATCTGGAGCCAGGGGCTCCCTATGTCAATGCGAATAAGCTGGCTCGG
AAGCTCTCTCCCCGCCAGGTGCAGATGATCGCCATCGGCGGCACCATTGG
TACGGGTCTGTTCCTGGGAACGGGTAAGGCGCTGGCCACCGGTGGGCCGG
CCTCGATGCTGATCTCTTATACGATCTGTGGTGTGATTGTATTCATTACT
ATGTTGTCGCTGGGTGAGATGGCGGCGTTTATCCCTGTTGCCGGGTCGTT
CTGTACCTTTGCTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006865 | amino acid transport |
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004840 |
| DBxref | InterPro:IPR004841 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3550333..3552297 - |
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