You are here

Home

KJC3_012452-T1, KJC3_012452-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012452-T1
Unique NameKJC3_012452-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3612430..3614010-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012452-T1 ID=KJC3_012452-T1|Name=KJC3_012452-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1581bp|location=Sequence derived from alignment at ch8:3612430..3614010- (Aspergillus niger KJC3)
ATGGCTACCCACGCCGATCGCATCACTCCTCTCTGCGCCCAAATCGCCCG
CTTTCACGAAACCTGCACTCCCTTCCGCATATACCATGGAAGCACCAACT
CCACCCGCAATGCCAGCCTCACCCCTACCAATACCATCAGTACTGCCCAC
CTGACGAACGTCCTCTCCGTTGATCATGCTGCCAAAACCGTTCAGGTAGA
GCCCAATGTCCCAATGGATGCTCTACTGAATGCCACACTTGCCCATAACT
TGGTCCCGCTAGTCGTCATGGAGTTTCCCGGCATCACCGCAGGCGGCGGA
TTCTCCGGCACCTCCGGCGAGAGCAGTTCGTTCCGACATGGCTTCTTCGA
TGCCACAGTGACTCGCATTGAGATAATCCTTGGTAATGGGGAGATTCGTA
TGGCCTCCCGCACCGAAAATGCGGAATTGTTCAATGCCGCAGCTTCCGCG
TTCGGTACCATGGGCGTGATCACCATGCTGGAGATCCAATGTCGTGACGC
CAAGCCGTTTGTCGAACTGTCCTATATTCCGGCTCGTAGCATCAGTGATG
CGAGGCAGATATTCAATGAGAAGACCCAGGACCCTGATGTTGATTACCTG
GACGGGATAGTCTTCGCCAAGGACCATGTAGTGGTATGCGCAGGGCGACT
GAGCGATGGTTCCCCCTCCACACACGACAAGACACAAAATTACAAGATTC
AACACTTCACCCGTCCCCACGATCCCTGGTTCTATCTTCATGCTCAACGC
TCGGGGCGTATACCGCCCCCATCATCAGCCCCCGTAGAACCAACGACCGA
GCTCGTACCCCTTCCTGACTATCTCTTCCGCTACGACCGCGGTGCCTTTT
GGACCGGCCGCTACGCCTATAAATACTTCATAACACCCTTCAACCGCATC
ACCCGCTACCTGCTTGACTACTTCATGCACACGCGCGTCATGTACCACGC
CCTGCACGCCAGTGGCCACTCCAATCAATACATCATTCAAGACGTAGCTG
TTCCATACTCCTCCGCAGACACCTTCGTCACGTGGCTCGACGAGCCAAAT
AACTTCGGCGCATATCCCATCTGGCTCTGTCCACTCAAAGTCACTGACAA
GACAAGCACAAGTAACCCCCAAATCCTCGGCCGAGGCAAACCCTCCCTTC
CCTCTCCCCCATCAGCAGAGAAGGGAGAAGATGAATATCTTCTCAACTTC
GGCCTCTGGGCGCCCTCCCCCTACCGCGGCGCCCAATTCATTGCCCAAAA
CCGGCGTCTCGAGCACAAAGTCCGCGATTTGGGCGGCAAGAAGTGGCTGT
ACGCATGCGCGTATTACACGGAAGACGAGTTCTGGGATATATACGATAAG
AAGCGGTATGATGCCCTCCGGGAGAAGTATCATGCGGGCTACCTGAAGAA
TCTGTATGAGAAGGTCCGGGTGGATTTGCACCCATCTATCACGGAGAAAG
AAAGGCAAGCAGAGATGGGATGGGGCCAGTGGGCGGGGAATGTGCTGTGG
AATGTGTGGCCGGTGAGTGGGTTGTATGGGGTTTATCGGGCGTGGTGGGG
AGGTGAGTATCTGTTGAAGAAGGGGAAGTAG
back to top

Coding sequence (CDS) from alignment at ch8:3612430..3614010-

>KJC3_012452-T1 ID=KJC3_012452-T1|Name=KJC3_012452-T1|organism=Aspergillus niger KJC3|type=CDS|length=1581bp|location=Sequence derived from alignment at ch8:3612430..3614010- (Aspergillus niger KJC3)
ATGGCTACCCACGCCGATCGCATCACTCCTCTCTGCGCCCAAATCGCCCG
CTTTCACGAAACCTGCACTCCCTTCCGCATATACCATGGAAGCACCAACT
CCACCCGCAATGCCAGCCTCACCCCTACCAATACCATCAGTACTGCCCAC
CTGACGAACGTCCTCTCCGTTGATCATGCTGCCAAAACCGTTCAGGTAGA
GCCCAATGTCCCAATGGATGCTCTACTGAATGCCACACTTGCCCATAACT
TGGTCCCGCTAGTCGTCATGGAGTTTCCCGGCATCACCGCAGGCGGCGGA
TTCTCCGGCACCTCCGGCGAGAGCAGTTCGTTCCGACATGGCTTCTTCGA
TGCCACAGTGACTCGCATTGAGATAATCCTTGGTAATGGGGAGATTCGTA
TGGCCTCCCGCACCGAAAATGCGGAATTGTTCAATGCCGCAGCTTCCGCG
TTCGGTACCATGGGCGTGATCACCATGCTGGAGATCCAATGTCGTGACGC
CAAGCCGTTTGTCGAACTGTCCTATATTCCGGCTCGTAGCATCAGTGATG
CGAGGCAGATATTCAATGAGAAGACCCAGGACCCTGATGTTGATTACCTG
GACGGGATAGTCTTCGCCAAGGACCATGTAGTGGTATGCGCAGGGCGACT
GAGCGATGGTTCCCCCTCCACACACGACAAGACACAAAATTACAAGATTC
AACACTTCACCCGTCCCCACGATCCCTGGTTCTATCTTCATGCTCAACGC
TCGGGGCGTATACCGCCCCCATCATCAGCCCCCGTAGAACCAACGACCGA
GCTCGTACCCCTTCCTGACTATCTCTTCCGCTACGACCGCGGTGCCTTTT
GGACCGGCCGCTACGCCTATAAATACTTCATAACACCCTTCAACCGCATC
ACCCGCTACCTGCTTGACTACTTCATGCACACGCGCGTCATGTACCACGC
CCTGCACGCCAGTGGCCACTCCAATCAATACATCATTCAAGACGTAGCTG
TTCCATACTCCTCCGCAGACACCTTCGTCACGTGGCTCGACGAGCCAAAT
AACTTCGGCGCATATCCCATCTGGCTCTGTCCACTCAAAGTCACTGACAA
GACAAGCACAAGTAACCCCCAAATCCTCGGCCGAGGCAAACCCTCCCTTC
CCTCTCCCCCATCAGCAGAGAAGGGAGAAGATGAATATCTTCTCAACTTC
GGCCTCTGGGCGCCCTCCCCCTACCGCGGCGCCCAATTCATTGCCCAAAA
CCGGCGTCTCGAGCACAAAGTCCGCGATTTGGGCGGCAAGAAGTGGCTGT
ACGCATGCGCGTATTACACGGAAGACGAGTTCTGGGATATATACGATAAG
AAGCGGTATGATGCCCTCCGGGAGAAGTATCATGCGGGCTACCTGAAGAA
TCTGTATGAGAAGGTCCGGGTGGATTTGCACCCATCTATCACGGAGAAAG
AAAGGCAAGCAGAGATGGGATGGGGCCAGTGGGCGGGGAATGTGCTGTGG
AATGTGTGGCCGGTGAGTGGGTTGTATGGGGTTTATCGGGCGTGGTGGGG
AGGTGAGTATCTGTTGAAGAAGGGGAAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012452KJC3_012452Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012452-T1.cdsKJC3_012452-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012452-T1.exon1KJC3_012452-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012452-T1KJC3_012452-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036318
DBxrefInterPro:IPR016166
DBxrefInterPro:IPR006094
DBxrefInterPro:IPR016169
DBxrefPFAM:PF01565
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3612430..3614010 -
Powered by Drupal