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KJC3_012477-T1, KJC3_012477-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012477-T1
Unique NameKJC3_012477-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3686994..3688207+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012477-T1 ID=KJC3_012477-T1|Name=KJC3_012477-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1214bp|location=Sequence derived from alignment at ch8:3686994..3688207+ (Aspergillus niger KJC3)
GGTGACCAGAGTTTCTTGAAGCATCATCCGTTTCTCTTCAATTCCTTCGA
GCATTGTTCCACTACAAGGTCTACACGATGCCGCCTAGCACTAGAAGCCG
TGTTGTTCTAGAGAGGTTATACAAAACCATCATGGATTGGAAGAACGTGG
TGCCCAAAGACGGCCACGTAGATATTAGCCAGCTGACGGATGTTGAATAT
GAGCCCCTATTCGACTTTCATGACCTGGAACACAGTGCGGAGTGGGACCG
GTCGTTATGTCCCCCTTTTCTATTCGAGCCTATGGAATCGAGAAAGCTGG
AAGAATCCCCACTCGATCCGGCTGAGGCCAGAGCATTTTTCGATATCGAT
AAGAACAAACCTCTTTTCCCTCTGGGGCCTATGGACCGTGTCGAGCAAAT
TTCCAGCCTCCTCGAAGACCGGGCCACGACTGAGGCTGAGTCTGAGCAAG
GCCTGCAGGTAGTTGAGTAAGTTTTGCTCCTCTCTGAATCACACATTTCC
TAACTTTATTACGAAACAGATCGCCGTTCTCGACTTTTTGGTTAGACGCC
CTCCTCTCATGGCCCTATGGCAAATCCGACTGGTGGGATACGCAATGTGT
CAGGGAACCATGTCCGAAAGCAGGGAAGGTTTTCCCTCATCTGGCCTTCC
ACCTCATTGATGAGAAAGCGGCCCGGGATGGCTCGATACTCTTTTCGGAG
TTCAGTGCTCTCGTTATAGCCATGAGAGGCCGGGCGAACCAGAGGAAGGT
GGACTCGGAGGACAAGCGGGAAGAGCTTTGGAAAAACGATGGCGAGGGCA
AAGAAGATTATCCGTATCTCTTCAAAGATGAAGAGTATTTTCCTGTCCTT
GTGGTGTCCTGTGTCCTGCCGCAACACGCGAGACTTCTGACGGCTTGTAT
GAACCAGCGAAAGTTGGTGATCAGGCAATCAAAGCTGTATAGTTTTGAAC
ATAAAAAGACAGCACCGGTGGACTTTTTTACCCGTTTGTTTCTCAGCAAG
CCACTGGAACCACGGAGAGAGGCTGAGTTCGGGGTTTTGGGGCCGGAAAA
GGGAGGAGGGTGAGCACCATAACGTGGGGGTAATTTGGTACTGCTCGTGC
GTTGATTTTTTACCTTGCTACATCGCAAGCATTGTTGACATTTGTCTGAT
GATATGGATTAAGGATTTGGGTCAAGTCTATTACGGGGTTACCTACAATC
GGGTGCGAACAGGG
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Coding sequence (CDS) from alignment at ch8:3686994..3688207+

>KJC3_012477-T1 ID=KJC3_012477-T1|Name=KJC3_012477-T1|organism=Aspergillus niger KJC3|type=CDS|length=1866bp|location=Sequence derived from alignment at ch8:3686994..3688207+ (Aspergillus niger KJC3)
ATGCCGCCTAGCACTAGAAGCCGTGTTGTTCTAGAGAGGTTATACAAAAC
CATCATGGATTGGAAGAACGTGGTGCCCAAAGACGGCCACGTAGATATTA
GCCAGCTGACGGATGTTGAATATGAGCCCCTATTCGACTTTCATGACCTG
GAACACAGTGCGGAGTGGGACCGGTCGTTATGTCCCCCTTTTCTATTCGA
GCCTATGGAATCGAGAAAGCTGGAAGAATCCCCACTCGATCCGGCTGAGG
CCAGAGCATTTTTCGATATCGATAAGAACAAACCTCTTTTCCCTCTGGGG
CCTATGGACCGTGTCGAGCAAATTTCCAGCCTCCTCGAAGACCGGGCCAC
GACTGAGGCTGAGTCTGAGCAAGGCCTGCAGGTAGTTGAATCGCCGTTCT
CGACTTTTTGGTTAGACGCCCTCCTCTCATGGCCCTATGGCAAATCCGAC
TGGTGGGATACGCAATGTGTCAGGGAACCATGTCCGAAAGCAGGGAAGGT
TTTCCCTCATCTGGCCTTCCACCTCATTGATGAGAAAGCGGCCCGGGATG
GCTCGATACTCTTTTCGGAGTTCAGTGCTCTCGTTATAGCCATGAGAGGC
CGGGCGAACCAGAGGAAGGTGGACTCGGAGGACAAGCGGGAAGAGCTTTG
GAAAAACGATGGCGAGGGCAAAGAAGATTATCCGTATCTCTTCAAAGATG
AAGAGTATTTTCCTGTCCTTGTGGTGTCCTGTGTCCTGCCGCAACACGCG
AGACTTCTGACGGCTTGTATGAACCAGCGAAAGTTGGTGATCAGGCAATC
AAAGCTGTATAGTTTTGAACATAAAAAGACAGCACCGGTGGACTTTTTTA
CCCGTTTGTTTCTCAGCAAGCCACTGGAACCACGGAGAGAGGCTGAGTTC
GGGGTTTTGGGGCCGGAAAAGGGAGGAGGGTGAATGCCGCCTAGCACTAG
AAGCCGTGTTGTTCTAGAGAGGTTATACAAAACCATCATGGATTGGAAGA
ACGTGGTGCCCAAAGACGGCCACGTAGATATTAGCCAGCTGACGGATGTT
GAATATGAGCCCCTATTCGACTTTCATGACCTGGAACACAGTGCGGAGTG
GGACCGGTCGTTATGTCCCCCTTTTCTATTCGAGCCTATGGAATCGAGAA
AGCTGGAAGAATCCCCACTCGATCCGGCTGAGGCCAGAGCATTTTTCGAT
ATCGATAAGAACAAACCTCTTTTCCCTCTGGGGCCTATGGACCGTGTCGA
GCAAATTTCCAGCCTCCTCGAAGACCGGGCCACGACTGAGGCTGAGTCTG
AGCAAGGCCTGCAGGTAGTTGAATCGCCGTTCTCGACTTTTTGGTTAGAC
GCCCTCCTCTCATGGCCCTATGGCAAATCCGACTGGTGGGATACGCAATG
TGTCAGGGAACCATGTCCGAAAGCAGGGAAGGTTTTCCCTCATCTGGCCT
TCCACCTCATTGATGAGAAAGCGGCCCGGGATGGCTCGATACTCTTTTCG
GAGTTCAGTGCTCTCGTTATAGCCATGAGAGGCCGGGCGAACCAGAGGAA
GGTGGACTCGGAGGACAAGCGGGAAGAGCTTTGGAAAAACGATGGCGAGG
GCAAAGAAGATTATCCGTATCTCTTCAAAGATGAAGAGTATTTTCCTGTC
CTTGTGGTGTCCTGTGTCCTGCCGCAACACGCGAGACTTCTGACGGCTTG
TATGAACCAGCGAAAGTTGGTGATCAGGCAATCAAAGCTGTATAGTTTTG
AACATAAAAAGACAGCACCGGTGGACTTTTTTACCCGTTTGTTTCTCAGC
AAGCCACTGGAACCACGGAGAGAGGCTGAGTTCGGGGTTTTGGGGCCGGA
AAAGGGAGGAGGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012477KJC3_012477Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012477-T1.utr5p1KJC3_012477-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012477-T1.exon1KJC3_012477-T1.exon1Aspergillus niger KJC3exon
KJC3_012477-T1.exon2KJC3_012477-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012477-T1.cdsKJC3_012477-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012477-T1.utr3p1KJC3_012477-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012477-T1KJC3_012477-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3686994..3688207 +
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