|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3717629..3718780+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012488-T1 ID=KJC3_012488-T1|Name=KJC3_012488-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1152bp|location=Sequence derived from alignment at ch8:3717629..3718780+ (Aspergillus niger KJC3)
ATGATCGAGGCGCCTTCTATATTCAGATTACAGGCGCTCTTCTTGATAAT
CCAGTATCATGCTGAAGTTGGCAGGTTTGAAAGAGCTTTCATGATGGCTT
CCATTGCCAGCCGTCATGTTACTGCTCTCCAGCTGAACCATGAGAGTCCA
CACCTCAGCTTTGTCACCCAGGAGATTCGACGAAGAGCTGCCTGGACGAT
GGCACTGCTTGATGGGTACTTTTCTGTAGGCCTGCCTGGCTACAGTACGA
TAAATTATGAAGAGATTTATCAGCAATACCCATGTCGTGAAGATGAATTT
GGCTCAAGGGATTCTGACACCATAGAGGGCCCTTCCACCGCTCGGGGTGA
AGATAAAGCTCACTCCAGCATGCTGGAGCTGATACTGCGTATCTCCAGGG
TGCGCAGAGATATCATGCGCTTCACCAGGCAGTTGGCCCTGCTGGAGCAG
CCTCTCGAAGAGTTCCAGGGTATTGTGCAAGGATTTCAAATGAATCTCGC
TCAACTCCAGGAGAAAATAGCGTCCGTGGTGGGTTCTTCAGCCACTGGGT
CCATGATCCGGCCAAATTTCCGGTGGGTTGTGAGAGCCTTAGAAATCCAA
ATAGCTTGGCGTCAGGCACACTGTGACTTGTTTCGCCTCTTCCTCCTCGG
ACATCCCAATGCGGCCCCTGATGTGGTATTGCGTCCCTTGGGATCAAGTA
CCTATGCCAGTCAAGCCCAGGCAATATGTCAAGAACACAGTGGCTGGATC
GTAGAAACCATATCGCAAGTTCGAAATAGCGATCTCCAAGTGCTCTTCTC
ATTCGATATTGCGAGATGTGCTTATCAGGCTGCACGCCTCAATCTCTTTC
TCGCTCATATGCCAAATGCGCGGTCGCAGCTAACATCAGACTCTGCCGTT
TCTAATGCTGCAGCATGTCTAGCTTTTATCAAGGAGAAATTCGCATCGTC
TGCTCATGCTCAACGAATGATCTCAGACCTTAGTCTGTTGATAGGAGCCT
ACGAGACGCGCGATGGCCATTTTGGAGCGGCGATGGCGCTTGATTCGTTG
CGGTTTTCTGGGGATGCACTCGAAAAGCACAAACAACTATCGGCACACAG
CCTCATTCATCAGGCCAACTTCGTGGATGACAGCTATCTCTATGAATTGT
GA back to topCoding sequence (CDS) from alignment at ch8:3717629..3718780+ >KJC3_012488-T1 ID=KJC3_012488-T1|Name=KJC3_012488-T1|organism=Aspergillus niger KJC3|type=CDS|length=1152bp|location=Sequence derived from alignment at ch8:3717629..3718780+ (Aspergillus niger KJC3)
ATGATCGAGGCGCCTTCTATATTCAGATTACAGGCGCTCTTCTTGATAAT
CCAGTATCATGCTGAAGTTGGCAGGTTTGAAAGAGCTTTCATGATGGCTT
CCATTGCCAGCCGTCATGTTACTGCTCTCCAGCTGAACCATGAGAGTCCA
CACCTCAGCTTTGTCACCCAGGAGATTCGACGAAGAGCTGCCTGGACGAT
GGCACTGCTTGATGGGTACTTTTCTGTAGGCCTGCCTGGCTACAGTACGA
TAAATTATGAAGAGATTTATCAGCAATACCCATGTCGTGAAGATGAATTT
GGCTCAAGGGATTCTGACACCATAGAGGGCCCTTCCACCGCTCGGGGTGA
AGATAAAGCTCACTCCAGCATGCTGGAGCTGATACTGCGTATCTCCAGGG
TGCGCAGAGATATCATGCGCTTCACCAGGCAGTTGGCCCTGCTGGAGCAG
CCTCTCGAAGAGTTCCAGGGTATTGTGCAAGGATTTCAAATGAATCTCGC
TCAACTCCAGGAGAAAATAGCGTCCGTGGTGGGTTCTTCAGCCACTGGGT
CCATGATCCGGCCAAATTTCCGGTGGGTTGTGAGAGCCTTAGAAATCCAA
ATAGCTTGGCGTCAGGCACACTGTGACTTGTTTCGCCTCTTCCTCCTCGG
ACATCCCAATGCGGCCCCTGATGTGGTATTGCGTCCCTTGGGATCAAGTA
CCTATGCCAGTCAAGCCCAGGCAATATGTCAAGAACACAGTGGCTGGATC
GTAGAAACCATATCGCAAGTTCGAAATAGCGATCTCCAAGTGCTCTTCTC
ATTCGATATTGCGAGATGTGCTTATCAGGCTGCACGCCTCAATCTCTTTC
TCGCTCATATGCCAAATGCGCGGTCGCAGCTAACATCAGACTCTGCCGTT
TCTAATGCTGCAGCATGTCTAGCTTTTATCAAGGAGAAATTCGCATCGTC
TGCTCATGCTCAACGAATGATCTCAGACCTTAGTCTGTTGATAGGAGCCT
ACGAGACGCGCGATGGCCATTTTGGAGCGGCGATGGCGCTTGATTCGTTG
CGGTTTTCTGGGGATGCACTCGAAAAGCACAAACAACTATCGGCACACAG
CCTCATTCATCAGGCCAACTTCGTGGATGACAGCTATCTCTATGAATTGT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3717629..3718780 + |
|
