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KJC3_012506-T1, KJC3_012506-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012506-T1
Unique NameKJC3_012506-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3776170..3777964-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012506-T1 ID=KJC3_012506-T1|Name=KJC3_012506-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1795bp|location=Sequence derived from alignment at ch8:3776170..3777964- (Aspergillus niger KJC3)
TGCCAAACAAACACACCCTCTTCTCAGGCTCATACCTCACATTGATCCAA
CATGGGCCAAATAGAAGAACTCCCCGACGACTACGATGAGTCGCTCGAAG
TCAACAAGCAGCCTCAACCCCCCGCGACCGAATCCAAAGATGAATTCACC
CCACCTCCCCCGGAGGAGCTCCCCATTCCCATCAAGGAAGAGCGCCTCAA
AGACCTGAATGCGGGCGCGGACCCCATGGCGCCTCAAATGCCGCCTGCCA
TGGAGGCTGTGAGCACCCACACGACAGATGAGCTGGCGGAGATTCTGAAT
CGCACGCCGCTGTTCATGACGGATATTAACAAGGCGTATGATGAGAGTTA
GTTTTCCTCTTTTAGTCTAGTCCTGGAAATATCTAGGTAGAATGTATGGG
CTAACAGGGTATGTGGGTAGAGGGCGAAAACCCCATGCTTGATGCGATCC
GCGCCCTCCAGAACGAAGGTACCCGCGGCGATGTCGCGCAGAATTTCCGT
GAACAAGGAAACGAAGCTGCTCGGGAGAAGCGCTGGGTTGACGCGAAGGA
GCATTACTCGAAGGGTATTGCCGTCTTGCTGGCCAAGGAGGATAAGTGGG
ATAAGCCTGAGGATGAGAAGGAGGAGGCCCGGTTGCGGAGGGAGGCCGAG
GAGGCGTGCTATATCAATCGCGCGCTGTGCCATTTGGAGTTGAGTATGTG
TTTTCTTGTCCTGAAGTGAGGAAAAGGTTGCTAACGTGGATAGAAAACTA
CCGATCTACGACCCTCGACTGCGCAGCCGTGCTGAAGCTGAACCCCAAGA
ACGTGAAAGCATACTATCGGTCCGCTATGGCGCTGTTTTCGCTAGATAAG
ATTATCGAGGCGGAGGATGTGGCGACCCGGGGATTGAAACTGGATCCGGC
CAACAAGGCTCTTCAAATGGTTGCTGGAAAGATCGGCGAGCGCAAGGCTG
TGATTGAGCGTATCGCGGCTAGAAAGAAGGCCGAGGATGAGCGCACACGC
AAGGAGAAGACGCTGCTTAGCGTTGCGCTGAAGGCGCGCCAGATCCGTAC
GCGCAAGACGGATCAGCCTCCTGAGATGGAGGACGTGGGCATCAAACTTT
CGCCCGATCCGCTGTCGCCCGAGAGTACGCTTGAGTTCCCGGCTGTGTTC
CTGTACCATATGGATGCGCAGACGGATTTCATCAAGGCATTCTCCGAAAT
GCATTCGATCGAGGATCATCTCGACTATATGTTCCCGTTGCCGTGGGATG
AGAAGGGAGAGTACAAGATCAATACGGTGGAGTGCTTCATGGAGACGGTT
ACCGGAGGTTTGATCCGCGCTGGCAAGAAGGTACCATTAGTACAGATTCT
GAGTGGAGGAAAGGTTGAGGTTGTGGATGAGTTGGTGAAGATTTACATCG
TGCCGACCAGCAAGAGCGCTAAGTTTATTGCTGAGATGAAGGCGCGCAAG
GAGGCTTGAGACCAGCCGGTTGTCTGAGTCTATTGCAGATGTTGAAAGCC
GCTGCGTGGCGCCAGAGGCCACTTGAATGGACAGCATGTCTATTCGCTTG
TGTTGCGGTCACTCCCGCGACATTCTCAAGTCGAGCCCAAAGTTGAGCAT
ATATACTGCCTGGACCGGCTCTTCTACTATATACCCATTGAGGTTTTGCG
GCTGATAGCCGTTGTATATAACGTCTTATGATGACGCCTAGACTTTGAAC
GAACTTTTCTACAATGGGCGTATTATATATCCAACTACCACCTTTGCAGC
TAAAGTGGCCATTCTTTGTTTACTGCCTAGCTTGATAGTACTAAC
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Coding sequence (CDS) from alignment at ch8:3776170..3777964-

>KJC3_012506-T1 ID=KJC3_012506-T1|Name=KJC3_012506-T1|organism=Aspergillus niger KJC3|type=CDS|length=3852bp|location=Sequence derived from alignment at ch8:3776170..3777964- (Aspergillus niger KJC3)
AAAACTACCGATCTACGACCCTCGACTGCGCAGCCGTGCTGAAGCTGAAC
CCCAAGAACGTGAAAGCATACTATCGGTCCGCTATGGCGCTGTTTTCGCT
AGATAAGATTATCGAGGCGGAGGATGTGGCGACCCGGGGATTGAAACTGG
ATCCGGCCAACAAGGCTCTTCAAATGGTTGCTGGAAAGATCGGCGAGCGC
AAGGCTGTGATTGAGCGTATCGCGGCTAGAAAGAAGGCCGAGGATGAGCG
CACACGCAAGGAGAAGACGCTGCTTAGCGTTGCGCTGAAGGCGCGCCAGA
TCCGTACGCGCAAGACGGATCAGCCTCCTGAGATGGAGGACGTGGGCATC
AAACTTTCGCCCGATCCGCTGTCGCCCGAGAGTACGCTTGAGTTCCCGGC
TGTGTTCCTGTACCATATGGATGCGCAGACGGATTTCATCAAGGCATTCT
CCGAAATGCATTCGATCGAGGATCATCTCGACTATATGTTCCCGTTGCCG
TGGGATGAGAAGGGAGAGTACAAGATCAATACGGTGGAGTGCTTCATGGA
GACGGTTACCGGAGGTTTGATCCGCGCTGGCAAGAAGGTACCATTAGTAC
AGATTCTGAGTGGAGGAAAGGTTGAGGTTGTGGATGAGTTGGTGAAGATT
TACATCGTGCCGACCAGCAAGAGCGCTAAGTTTATTGCTGAGATGAAGGC
GCGCAAGGAGGCTTGAAGGGCGAAAACCCCATGCTTGATGCGATCCGCGC
CCTCCAGAACGAAGGTACCCGCGGCGATGTCGCGCAGAATTTCCGTGAAC
AAGGAAACGAAGCTGCTCGGGAGAAGCGCTGGGTTGACGCGAAGGAGCAT
TACTCGAAGGGTATTGCCGTCTTGCTGGCCAAGGAGGATAAGTGGGATAA
GCCTGAGGATGAGAAGGAGGAGGCCCGGTTGCGGAGGGAGGCCGAGGAGG
CGTGCTATATCAATCGCGCGCTGTGCCATTTGGAGTTGAATGGGCCAAAT
AGAAGAACTCCCCGACGACTACGATGAGTCGCTCGAAGTCAACAAGCAGC
CTCAACCCCCCGCGACCGAATCCAAAGATGAATTCACCCCACCTCCCCCG
GAGGAGCTCCCCATTCCCATCAAGGAAGAGCGCCTCAAAGACCTGAATGC
GGGCGCGGACCCCATGGCGCCTCAAATGCCGCCTGCCATGGAGGCTGTGA
GCACCCACACGACAGATGAGCTGGCGGAGATTCTGAATCGCACGCCGCTG
TTCATGACGGATATTAACAAGGCGTATGATGAGAAAAACTACCGATCTAC
GACCCTCGACTGCGCAGCCGTGCTGAAGCTGAACCCCAAGAACGTGAAAG
CATACTATCGGTCCGCTATGGCGCTGTTTTCGCTAGATAAGATTATCGAG
GCGGAGGATGTGGCGACCCGGGGATTGAAACTGGATCCGGCCAACAAGGC
TCTTCAAATGGTTGCTGGAAAGATCGGCGAGCGCAAGGCTGTGATTGAGC
GTATCGCGGCTAGAAAGAAGGCCGAGGATGAGCGCACACGCAAGGAGAAG
ACGCTGCTTAGCGTTGCGCTGAAGGCGCGCCAGATCCGTACGCGCAAGAC
GGATCAGCCTCCTGAGATGGAGGACGTGGGCATCAAACTTTCGCCCGATC
CGCTGTCGCCCGAGAGTACGCTTGAGTTCCCGGCTGTGTTCCTGTACCAT
ATGGATGCGCAGACGGATTTCATCAAGGCATTCTCCGAAATGCATTCGAT
CGAGGATCATCTCGACTATATGTTCCCGTTGCCGTGGGATGAGAAGGGAG
AGTACAAGATCAATACGGTGGAGTGCTTCATGGAGACGGTTACCGGAGGT
TTGATCCGCGCTGGCAAGAAGGTACCATTAGTACAGATTCTGAGTGGAGG
AAAGGTTGAGGTTGTGGATGAGTTGGTGAAGATTTACATCGTGCCGACCA
GCAAGAGCGCTAAGTTTATTGCTGAGATGAAGGCGCGCAAGGAGGCTTGA
AGGGCGAAAACCCCATGCTTGATGCGATCCGCGCCCTCCAGAACGAAGGT
ACCCGCGGCGATGTCGCGCAGAATTTCCGTGAACAAGGAAACGAAGCTGC
TCGGGAGAAGCGCTGGGTTGACGCGAAGGAGCATTACTCGAAGGGTATTG
CCGTCTTGCTGGCCAAGGAGGATAAGTGGGATAAGCCTGAGGATGAGAAG
GAGGAGGCCCGGTTGCGGAGGGAGGCCGAGGAGGCGTGCTATATCAATCG
CGCGCTGTGCCATTTGGAGTTGAATGGGCCAAATAGAAGAACTCCCCGAC
GACTACGATGAGTCGCTCGAAGTCAACAAGCAGCCTCAACCCCCCGCGAC
CGAATCCAAAGATGAATTCACCCCACCTCCCCCGGAGGAGCTCCCCATTC
CCATCAAGGAAGAGCGCCTCAAAGACCTGAATGCGGGCGCGGACCCCATG
GCGCCTCAAATGCCGCCTGCCATGGAGGCTGTGAGCACCCACACGACAGA
TGAGCTGGCGGAGATTCTGAATCGCACGCCGCTGTTCATGACGGATATTA
ACAAGGCGTATGATGAGAAAAACTACCGATCTACGACCCTCGACTGCGCA
GCCGTGCTGAAGCTGAACCCCAAGAACGTGAAAGCATACTATCGGTCCGC
TATGGCGCTGTTTTCGCTAGATAAGATTATCGAGGCGGAGGATGTGGCGA
CCCGGGGATTGAAACTGGATCCGGCCAACAAGGCTCTTCAAATGGTTGCT
GGAAAGATCGGCGAGCGCAAGGCTGTGATTGAGCGTATCGCGGCTAGAAA
GAAGGCCGAGGATGAGCGCACACGCAAGGAGAAGACGCTGCTTAGCGTTG
CGCTGAAGGCGCGCCAGATCCGTACGCGCAAGACGGATCAGCCTCCTGAG
ATGGAGGACGTGGGCATCAAACTTTCGCCCGATCCGCTGTCGCCCGAGAG
TACGCTTGAGTTCCCGGCTGTGTTCCTGTACCATATGGATGCGCAGACGG
ATTTCATCAAGGCATTCTCCGAAATGCATTCGATCGAGGATCATCTCGAC
TATATGTTCCCGTTGCCGTGGGATGAGAAGGGAGAGTACAAGATCAATAC
GGTGGAGTGCTTCATGGAGACGGTTACCGGAGGTTTGATCCGCGCTGGCA
AGAAGGTACCATTAGTACAGATTCTGAGTGGAGGAAAGGTTGAGGTTGTG
GATGAGTTGGTGAAGATTTACATCGTGCCGACCAGCAAGAGCGCTAAGTT
TATTGCTGAGATGAAGGCGCGCAAGGAGGCTTGAAGGGCGAAAACCCCAT
GCTTGATGCGATCCGCGCCCTCCAGAACGAAGGTACCCGCGGCGATGTCG
CGCAGAATTTCCGTGAACAAGGAAACGAAGCTGCTCGGGAGAAGCGCTGG
GTTGACGCGAAGGAGCATTACTCGAAGGGTATTGCCGTCTTGCTGGCCAA
GGAGGATAAGTGGGATAAGCCTGAGGATGAGAAGGAGGAGGCCCGGTTGC
GGAGGGAGGCCGAGGAGGCGTGCTATATCAATCGCGCGCTGTGCCATTTG
GAGTTGAATGGGCCAAATAGAAGAACTCCCCGACGACTACGATGAGTCGC
TCGAAGTCAACAAGCAGCCTCAACCCCCCGCGACCGAATCCAAAGATGAA
TTCACCCCACCTCCCCCGGAGGAGCTCCCCATTCCCATCAAGGAAGAGCG
CCTCAAAGACCTGAATGCGGGCGCGGACCCCATGGCGCCTCAAATGCCGC
CTGCCATGGAGGCTGTGAGCACCCACACGACAGATGAGCTGGCGGAGATT
CTGAATCGCACGCCGCTGTTCATGACGGATATTAACAAGGCGTATGATGA
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012506KJC3_012506Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012506-T1KJC3_012506-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012506-T1.cdsKJC3_012506-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012506-T1.utr3p1KJC3_012506-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012506-T1.exon3KJC3_012506-T1.exon3Aspergillus niger KJC3exon
KJC3_012506-T1.exon2KJC3_012506-T1.exon2Aspergillus niger KJC3exon
KJC3_012506-T1.exon1KJC3_012506-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012506-T1.utr5p1KJC3_012506-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3776170..3777964 -
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