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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3793387..3794855+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012513-T1 ID=KJC3_012513-T1|Name=KJC3_012513-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1469bp|location=Sequence derived from alignment at ch8:3793387..3794855+ (Aspergillus niger KJC3)
ACAGCATTTTTTTCAGCGCATTCGAAACATAATCCTCCTCACTGACGCAC
CTGCGAGTATACCGATTCCATATATTACCTGAATTGACTCTGTGTATACA
CAAGAGCCTCTTGCTTTGTCGCAGAGGCTTCCAGCAACATGCCCATCAAC
CAACCATCAAATCAGATTAAATTTACCAACGTATCAGTCGTCAGGCTAAA
AAAGGGTACGTATTGATATGCATGTGTGGCCCTTCATTTGCGATCGTCTT
GCGTGGCATGTCTGTCAATAATGTGGGGAGATCATGCGCAAATTCAGCGT
AGAAAGAAAAACTGCCTGCGAAACTTCCAGTCGGCCCCGCAACCCCGCTA
ACCGTTTCACCAACAGGTAAAAAGCGCTTCGAACTCGCCTGCTACAAGAA
CAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAGGATCTCGACAATGTCC
TCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAAAGCGCAAACAGCCCCA
TCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACACGCCTGCAGATGAGAT
CCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAAGTTGGCGAGCGTGAGC
GCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGTGTTGGATATCGTATCA
GGACGGCTTGTTGATCCTACGACGAAGCGAGTCTATACCCCCGGAATGAT
TTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGTGGTCAACAGCAGTCGC
AAACGTCTGGCAATGGGGAGACTAATGGGGACGACAGCGAGGAGAGCCGC
CCGAGGAAACCGCTCTGGACGGGTGTGACGGCCAACAAGTCGGCGAAGAG
TCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCATGGCAACCTATCCCTG
TGATGCGGGCGCGGATGCGCCTCCGTGTCACCTGTCCTGTGTCACTGTTG
AAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTGCTGCCGCGGGTGGTAA
AGAAAAGGAGGCGCCGTCCAAGAGCGGCTCCAAGTCGAACAAGAAGGGTG
GAAAGGGGTCCAAGAAAGCCCGTCAGCAGGAATCCGAGGATGAGGCAGGT
GGATCTGACGCAGAGTCCGCACCTGCCAAGGGTCCGAGCAATGTCAAGGA
TAAGATCCTGAGCTATATCGAATCTATTGAGGCTCAGGAGGTTGTCGGCG
GAGACGAGTGGGAGATCATTGGCTTTGCTGAGCCGGGAGCTTTCAAGGGA
TTGAATGAATTTGTGGGCAACGAGACCCGGGGCAGAGGACGTGTGGAGGT
GCTGGATATGACGGTGACCCATGAAGAGTAAGCCCCGCCGGGATTACTTC
TGGTGCAACCATGTACAGCCTGCTATGATTGATGACTAGGAAGGATACCA
AAATTATGCCATAAATGTGACCATACTACAATATACTAGAATCCAAGCAT
ATCATGATTAGATACCATA back to topCoding sequence (CDS) from alignment at ch8:3793387..3794855+ >KJC3_012513-T1 ID=KJC3_012513-T1|Name=KJC3_012513-T1|organism=Aspergillus niger KJC3|type=CDS|length=2064bp|location=Sequence derived from alignment at ch8:3793387..3794855+ (Aspergillus niger KJC3)
ATGCCCATCAACCAACCATCAAATCAGATTAAATTTACCAACGTATCAGT
CGTCAGGCTAAAAAAGGGTAAAAAGCGCTTCGAACTCGCCTGCTACAAGA
ACAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAGGATCTCGACAATGTC
CTCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAAAGCGCAAACAGCCCC
ATCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACACGCCTGCAGATGAGA
TCCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAAGTTGGCGAGCGTGAG
CGCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGTGTTGGATATCGTATC
AGGACGGCTTGTTGATCCTACGACGAAGCGAGTCTATACCCCCGGAATGA
TTTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGTGGTCAACAGCAGTCG
CAAACGTCTGGCAATGGGGAGACTAATGGGGACGACAGCGAGGAGAGCCG
CCCGAGGAAACCGCTCTGGACGGGTGTGACGGCCAACAAGTCGGCGAAGA
GTCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCATGGCAACCTATCCCT
GTGATGCGGGCGCGGATGCGCCTCCGTGTCACCTGTCCTGTGTCACTGTT
GAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTGCTGCCGCGGGTGGTA
AAGAAAAGGAGGCGCCGTCCAAGAGCGGCTCCAAGTCGAACAAGAAGGGT
GGAAAGGGGTCCAAGAAAGCCCGTCAGCAGGAATCCGAGGATGAGGCAGG
TGGATCTGACGCAGAGTCCGCACCTGCCAAGGGTCCGAGCAATGTCAAGG
ATAAGATCCTGAGCTATATCGAATCTATTGAGGCTCAGGAGGTTGTCGGC
GGAGACGAGTGGGAGATCATTGGCTTTGCTGAGCCGGGAGCTTTCAAGGG
ATTGAATGAATTTGTGGGCAACGAGACCCGGGGCAGAGGACGTGTGGAGG
TGCTGGATATGACGGTGACCCATGAAGAGTAAATGCCCATCAACCAACCA
TCAAATCAGATTAAATTTACCAACGTATCAGTCGTCAGGCTAAAAAAGGG
TAAAAAGCGCTTCGAACTCGCCTGCTACAAGAACAAACTCCTCGAGTACC
GCTCCGGAGCAGAGAAGGATCTCGACAATGTCCTCCAAGTCCCCACGATC
TTCCTGTCGGTTTCCAAAGCGCAAACAGCCCCATCCGCCGAGTTAACAAA
GGCCTTCGGCGCCGACACGCCTGCAGATGAGATCCGGCAAGAAATTCTAC
GAAAGGGTGAAGTGCAAGTTGGCGAGCGTGAGCGCAAGGAAATCATCGAG
CGCGTGGAGAAGGAGGTGTTGGATATCGTATCAGGACGGCTTGTTGATCC
TACGACGAAGCGAGTCTATACCCCCGGAATGATTTCCAAGGCCTTGGACC
AGCTCAGCTCGGCTAGTGGTCAACAGCAGTCGCAAACGTCTGGCAATGGG
GAGACTAATGGGGACGACAGCGAGGAGAGCCGCCCGAGGAAACCGCTCTG
GACGGGTGTGACGGCCAACAAGTCGGCGAAGAGTCAAGCGCTTGAAGCTA
TGAAGGCGCTTATTGCATGGCAACCTATCCCTGTGATGCGGGCGCGGATG
CGCCTCCGTGTCACCTGTCCTGTGTCACTGTTGAAGCAGAGTGTTAAGGG
TGGTGCGGCCGGTGGTGCTGCCGCGGGTGGTAAAGAAAAGGAGGCGCCGT
CCAAGAGCGGCTCCAAGTCGAACAAGAAGGGTGGAAAGGGGTCCAAGAAA
GCCCGTCAGCAGGAATCCGAGGATGAGGCAGGTGGATCTGACGCAGAGTC
CGCACCTGCCAAGGGTCCGAGCAATGTCAAGGATAAGATCCTGAGCTATA
TCGAATCTATTGAGGCTCAGGAGGTTGTCGGCGGAGACGAGTGGGAGATC
ATTGGCTTTGCTGAGCCGGGAGCTTTCAAGGGATTGAATGAATTTGTGGG
CAACGAGACCCGGGGCAGAGGACGTGTGGAGGTGCTGGATATGACGGTGA
CCCATGAAGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042256 | mature ribosome assembly |
| GO:0042254 | ribosome biogenesis |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012513-T1.utr5p1 | KJC3_012513-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012513-T1.utr3p1 | KJC3_012513-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926400M |
| DBxref | InterPro:IPR019783 |
| DBxref | InterPro:IPR037188 |
| DBxref | InterPro:IPR002140 |
| DBxref | InterPro:IPR036786 |
| DBxref | InterPro:IPR018978 |
| DBxref | PFAM:PF09377 |
| DBxref | PFAM:PF01172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3793387..3794855 + |
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