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KJC3_012531-T1, KJC3_012531-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012531-T1
Unique NameKJC3_012531-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3841918..3843879-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012531-T1 ID=KJC3_012531-T1|Name=KJC3_012531-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1962bp|location=Sequence derived from alignment at ch8:3841918..3843879- (Aspergillus niger KJC3)
AACCTAGTTAGTTAACTAGTTAACTGGCCGACGCTGCCTACTCTCGCTGC
AAGAGGACAACTTCCCCAGTCCATTGTGCATATCTACCCGTCTACCTTCT
TCCCTTCCTTTGCACCACTCCCTTCCCCCCCTTTATCCACTTTCCCACGA
CCTTCCTTCTTTGATCGACTCTCCTCCGACACCTTTATCGTGTGACGTGA
TCTGTCTCCTTAGGCTGACTGTCTCCGGACACCCCTCGATCCCCTCCAAC
CCGTCGCAACCCCAATACAGACCATGGCTGATGATACCGCCGCGGCCGAG
GATGCGCACATCACTTTCAACGTGAAGTCATCCAATGATGCTAAATATAC
ACTCACTCTGCCATCATCAACCTCGGTCTCTGATCTGAAAGAGAAGCTAG
CGTCTTCGGAATATGCTGATACCCCAGCTGAGCGCCAGCGTCTGATCTAC
TCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCAACGTACAACATCAA
GGATGGACACACTATTCACCTGGTGAAGAGTGCACCCAGCAACCGGCCCC
CTAGTGGTGCTGCGACGACGACGTCAACATCCGCACCTGGTGGTGCGGCT
GCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTCGCTGCCGGCACGGG
CAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATATGCCGGGTTCGCGC
AACTGCCAGGTGCAGGAATGTTCGGGCCTGATGGCGGGGTAAGTCGTTTG
CCTTGATGTTGTCCTGACAGGCTTCTTGTGTCATCGACAAACCAACTAAT
ACGCTGTTTCTAGATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACA
TGCTCGAAAACCCTCAATTTCAGTCTACGATCAACGAAGCTCTGCAAAAC
CCCGCCATGATTGACATGATGATCCAACAGAACCCCATGCTGCGCGAAAT
GGGTCCTGGCGTACGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGC
TCACCGACCCCAACTCGATACGTCAGATGGTACAGATGCAGAGAGCCATG
GGTGGCGGGGGCCTTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACCAA
CACAACACCCGAGGAAAACAGAGACGCTCAGAACAATACCGGTACCACGC
CCACTCCTGGCGCCGCGTTCAACCCTTTTATGCCGGCCGGTCTCGGCGCT
GGAAATCCTTTCGCAGCCCTTTTTGGAGGCAATCCCATGATGGGCAACCC
TGCTGCAGGAGCGACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTC
AACCGGACAGCACCGAGCGAGCCGCTGGGGGTGATAACGCTACGGGACAA
GGACAGAACCAGCAGGGCTTCCAGAATCCGTTCAGCATGTTCATGAACCC
AGCGCTCTTTGGCGGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATC
CGCAACAGAATCCTTTCCTCCGGGACCCAGCACTGCTGCAACAATGGATG
CAGAACCTAGGTGCCGCACCGGGAGAAGGAGGCGCGGCTGGTACCAATCC
TCTGGCGGCACTGTTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATA
ACCGGCCCCCCGAGGAACGGTATGCAGAGCAGCTTCGTCAATTGAACGAC
ATGGGATTTTTCGAGTTTGAGAGGAATATCGAGGCTCTTCGCCGAGCAGG
AGGCAGCGTGCAAGGGGCAGTGGAGTATCTATTGAGCCACCCCTCTTAAA
TCACGCCTTAATCCCGACCGTGATGAGTTGCATTATTGTTTTTCTTCCTT
CGAAATTTTTCCAGTTGATTTATATCCTTTATTGACCATGCATTTCTGCG
TACGTGTCAATGAGGGATGACCCTTATTATGTAGCAAATATCCTCTCAGC
CTAGTTGCACGGCGTTACTTTAGCAGGAATCATGACAGATTACAATCGCA
AGCGGAATGGTA
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Coding sequence (CDS) from alignment at ch8:3841918..3843879-

>KJC3_012531-T1 ID=KJC3_012531-T1|Name=KJC3_012531-T1|organism=Aspergillus niger KJC3|type=CDS|length=2802bp|location=Sequence derived from alignment at ch8:3841918..3843879- (Aspergillus niger KJC3)
ATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCC
TCAATTTCAGTCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTG
ACATGATGATCCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGTA
CGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAA
CTCGATACGTCAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCC
TTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGAG
GAAAACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGC
CGCGTTCAACCCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCG
CAGCCCTTTTTGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGCG
ACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCAC
CGAGCGAGCCGCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGC
AGGGCTTCCAGAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGGC
GGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCC
TTTCCTCCGGGACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTG
CCGCACCGGGAGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACTG
TTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCGA
GGAACGGTATGCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTCG
AGTTTGAGAGGAATATCGAGGCTCTTCGCCGAGCAGGAGGCAGCGTGCAA
GGGGCAGTGGAGTATCTATTGAGCCACCCCTCTTAAATGGCTGATGATAC
CGCCGCGGCCGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAATG
ATGCTAAATATACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCTG
AAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACCCCAGCTGAGCGCCA
GCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCAA
CGTACAACATCAAGGATGGACACACTATTCACCTGGTGAAGAGTGCACCC
AGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACGTCAACATCCGCACC
TGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTCG
CTGCCGGCACGGGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATAT
GCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTCGGGCCTGATGGCGG
GATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACC
CTCAATTTCAGTCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATT
GACATGATGATCCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGT
ACGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCA
ACTCGATACGTCAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGC
CTTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGA
GGAAAACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCG
CCGCGTTCAACCCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTC
GCAGCCCTTTTTGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGC
GACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCA
CCGAGCGAGCCGCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAG
CAGGGCTTCCAGAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGG
CGGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATC
CTTTCCTCCGGGACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGT
GCCGCACCGGGAGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACT
GTTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCG
AGGAACGGTATGCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTC
GAGTTTGAGAGGAATATCGAGGCTCTTCGCCGAGCAGGAGGCAGCGTGCA
AGGGGCAGTGGAGTATCTATTGAGCCACCCCTCTTAAATGGCTGATGATA
CCGCCGCGGCCGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAAT
GATGCTAAATATACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCT
GAAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACCCCAGCTGAGCGCC
AGCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCA
ACGTACAACATCAAGGATGGACACACTATTCACCTGGTGAAGAGTGCACC
CAGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACGTCAACATCCGCAC
CTGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTC
GCTGCCGGCACGGGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATA
TGCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTCGGGCCTGATGGCG
GG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012531KJC3_012531Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012531-T1KJC3_012531-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012531-T1.cdsKJC3_012531-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012531-T1.utr3p1KJC3_012531-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012531-T1.exon2KJC3_012531-T1.exon2Aspergillus niger KJC3exon
KJC3_012531-T1.exon1KJC3_012531-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012531-T1.utr5p1KJC3_012531-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264JQ1
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR006636
DBxrefInterPro:IPR015940
DBxrefInterPro:IPR000626
DBxrefPFAM:PF00240
DBxrefPFAM:PF00627
DBxrefPFAM:PF13881
DBxrefPFAM:PF11976
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3841918..3843879 -
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