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KJC3_012538-T1, KJC3_012538-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012538-T1
Unique NameKJC3_012538-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3862321..3864140-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012538-T1 ID=KJC3_012538-T1|Name=KJC3_012538-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1820bp|location=Sequence derived from alignment at ch8:3862321..3864140- (Aspergillus niger KJC3)
GCTTATTCCGAAAATAGAACCGGAAGCGACCGTGGGATCTGCTACTGTCT
TATGAACTTGTAAATATCACTTCGACATTTCCGGGTTTTACTGGAGAGCA
GCTCATAGCTCTCGCCGCAGAACGATGTGCGATAAACAGAAAATCGTCCT
CGCATGCACATAGTTGCCACTTCTTGTGTCAGCGCAAATTCCTTCTTACT
ATCCCACCAAGAACGGTCTTACGGAGTCAACAATGAAAGAGCACGCCTCA
GACAACTTTCTTCACAACGCATGGTGCGACGCTTCTCATAGTCCTGATGA
ATTACCAAGGCACGAAGGAAAGCGCAGGTTACTCCTGATATACATCCATG
GCTTTCTAGGGTCAGAGGACAGCTTTTGTAACTTTCCTAGGGATGTCCAC
GATCTCCTTAAGGCCTCGTTGGCTCAAACCCACATTACATACACCAAGAT
ATACCCCCGCTATAAGACCAGAGGACCTATACATGTTGCCCGCGACGATA
TCATCCGGTGGTAAGTAATATCTCAAGCTGTAGCAAATTTAGTCCTTTCA
TATCGAGCATTTCCGCAGGTTATCGCCACACATGGCTCCAGATCTGGATC
TCATACTGCTCGGTCACAGCATAGGAGGTCTTATCGCTGCAGACGTTGCA
CTTGCGCAATCCTACCCAACTGCTGGCCATTTTCCGAACAGTGACCTAAA
CAATATATTTGTCGGCCTAGTGGCCTTTGATACTCCTTTTCTCGGACTTC
ACCCGCGCGTCATTACGACGGCAGCCGGCAGGGTTTTTTGCCGGAAAGCA
AAGAATGACAGTAGGCGGACATCTCAGAGTACCACGAACAGCCGAATAGC
ACACGACGATCCGACGTTTGACCCAAACTTGACCAACGATGTCGACAGGA
TCCAATGGAAAGGGTGGAATGGAGCGCTCAATTTTCTTGCAAAGCATTCG
GGTCATTTGTCTCGGTCTGTCCTTCAGTATGTTTTCTCATACTATGATCA
TGTCGGATGTCTAAACGACTACTTTGGGCTTCTCAGACGACACAAGAAAC
TTTGCCGTTGGGCGAAGGGCGATGAATCTGGTAGACGGGCTGGCTTTGTC
AACTATTACACGACTGCCTGCCCACACAGCGGAACCATCAGCGGTGATGA
GCACGGGAACAGTAGGCTCTGGAGTGATAAGCAGTTTACCTGCCACGGAA
CGTCGCAAATACACGGCAATCATGTACAAGACCGAGACTCTGCGTTAGTG
GTGTCTGATATACGAGAAAAGGTGCCAGCCGACCGCTCGTCCGAACCACT
GTTAGACACAAAATTTCCTTTCACCAAAATCGATACACGGACCTCATCAA
GCTCAAGCTCACGTAATTCAGGCGAACACGGAGATAGGCGCAACAATTCT
GATGACATCAAACCACGGGGGCGACTGTTCTGCTATGTTCCAGAAAAAGC
CCGCAAAAAGCAGCTCTGGGTTTCGCTACGTATTGAAGGCATGGATGAAA
TCGCCGCCCATCAGTCCATGTTTTTTCCTCTTGGCAAGCACTACGACCGA
TTTGTTGCCGATACTGTGGCAAGAATTGAAAGCTGGCTGTTATGAGTGTG
TTTGCACAACTCCCAGCGGAGCGTATATAGAGAGACCCCCGGCGCTTAAA
ACGGCTTTTGATTGCCGGCCTTGATACTTCTAGAGATACCTTCGGCTCTT
TTACAATGATCTCTGAGCTTTGCCCAAGATTTTGTGGCTATATAGCATCT
CAACCATGTATCATATCACATCTTTTAGAGTCCTTAGAAGGAAAAGCTCT
AACAACTCAATTATATAGAC
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Coding sequence (CDS) from alignment at ch8:3862321..3864140-

>KJC3_012538-T1 ID=KJC3_012538-T1|Name=KJC3_012538-T1|organism=Aspergillus niger KJC3|type=CDS|length=2610bp|location=Sequence derived from alignment at ch8:3862321..3864140- (Aspergillus niger KJC3)
GTTATCGCCACACATGGCTCCAGATCTGGATCTCATACTGCTCGGTCACA
GCATAGGAGGTCTTATCGCTGCAGACGTTGCACTTGCGCAATCCTACCCA
ACTGCTGGCCATTTTCCGAACAGTGACCTAAACAATATATTTGTCGGCCT
AGTGGCCTTTGATACTCCTTTTCTCGGACTTCACCCGCGCGTCATTACGA
CGGCAGCCGGCAGGGTTTTTTGCCGGAAAGCAAAGAATGACAGTAGGCGG
ACATCTCAGAGTACCACGAACAGCCGAATAGCACACGACGATCCGACGTT
TGACCCAAACTTGACCAACGATGTCGACAGGATCCAATGGAAAGGGTGGA
ATGGAGCGCTCAATTTTCTTGCAAAGCATTCGGGTCATTTGTCTCGGTCT
GTCCTTCAGTATGTTTTCTCATACTATGATCATGTCGGATGTCTAAACGA
CTACTTTGGGCTTCTCAGACGACACAAGAAACTTTGCCGTTGGGCGAAGG
GCGATGAATCTGGTAGACGGGCTGGCTTTGTCAACTATTACACGACTGCC
TGCCCACACAGCGGAACCATCAGCGGTGATGAGCACGGGAACAGTAGGCT
CTGGAGTGATAAGCAGTTTACCTGCCACGGAACGTCGCAAATACACGGCA
ATCATGTACAAGACCGAGACTCTGCGTTAGTGGTGTCTGATATACGAGAA
AAGGTGCCAGCCGACCGCTCGTCCGAACCACTGTTAGACACAAAATTTCC
TTTCACCAAAATCGATACACGGACCTCATCAAGCTCAAGCTCACGTAATT
CAGGCGAACACGGAGATAGGCGCAACAATTCTGATGACATCAAACCACGG
GGGCGACTGTTCTGCTATGTTCCAGAAAAAGCCCGCAAAAAGCAGCTCTG
GGTTTCGCTACGTATTGAAGGCATGGATGAAATCGCCGCCCATCAGTCCA
TGTTTTTTCCTCTTGGCAAGCACTACGACCGATTTGTTGCCGATACTGTG
GCAAGAATTGAAAGCTGGCTGTTATGAATGAAAGAGCACGCCTCAGACAA
CTTTCTTCACAACGCATGGTGCGACGCTTCTCATAGTCCTGATGAATTAC
CAAGGCACGAAGGAAAGCGCAGGTTACTCCTGATATACATCCATGGCTTT
CTAGGGTCAGAGGACAGCTTTTGTAACTTTCCTAGGGATGTCCACGATCT
CCTTAAGGCCTCGTTGGCTCAAACCCACATTACATACACCAAGATATACC
CCCGCTATAAGACCAGAGGACCTATACATGTTGCCCGCGACGATATCATC
CGGTGGTTATCGCCACACATGGCTCCAGATCTGGATCTCATACTGCTCGG
TCACAGCATAGGAGGTCTTATCGCTGCAGACGTTGCACTTGCGCAATCCT
ACCCAACTGCTGGCCATTTTCCGAACAGTGACCTAAACAATATATTTGTC
GGCCTAGTGGCCTTTGATACTCCTTTTCTCGGACTTCACCCGCGCGTCAT
TACGACGGCAGCCGGCAGGGTTTTTTGCCGGAAAGCAAAGAATGACAGTA
GGCGGACATCTCAGAGTACCACGAACAGCCGAATAGCACACGACGATCCG
ACGTTTGACCCAAACTTGACCAACGATGTCGACAGGATCCAATGGAAAGG
GTGGAATGGAGCGCTCAATTTTCTTGCAAAGCATTCGGGTCATTTGTCTC
GGTCTGTCCTTCAGTATGTTTTCTCATACTATGATCATGTCGGATGTCTA
AACGACTACTTTGGGCTTCTCAGACGACACAAGAAACTTTGCCGTTGGGC
GAAGGGCGATGAATCTGGTAGACGGGCTGGCTTTGTCAACTATTACACGA
CTGCCTGCCCACACAGCGGAACCATCAGCGGTGATGAGCACGGGAACAGT
AGGCTCTGGAGTGATAAGCAGTTTACCTGCCACGGAACGTCGCAAATACA
CGGCAATCATGTACAAGACCGAGACTCTGCGTTAGTGGTGTCTGATATAC
GAGAAAAGGTGCCAGCCGACCGCTCGTCCGAACCACTGTTAGACACAAAA
TTTCCTTTCACCAAAATCGATACACGGACCTCATCAAGCTCAAGCTCACG
TAATTCAGGCGAACACGGAGATAGGCGCAACAATTCTGATGACATCAAAC
CACGGGGGCGACTGTTCTGCTATGTTCCAGAAAAAGCCCGCAAAAAGCAG
CTCTGGGTTTCGCTACGTATTGAAGGCATGGATGAAATCGCCGCCCATCA
GTCCATGTTTTTTCCTCTTGGCAAGCACTACGACCGATTTGTTGCCGATA
CTGTGGCAAGAATTGAAAGCTGGCTGTTATGAATGAAAGAGCACGCCTCA
GACAACTTTCTTCACAACGCATGGTGCGACGCTTCTCATAGTCCTGATGA
ATTACCAAGGCACGAAGGAAAGCGCAGGTTACTCCTGATATACATCCATG
GCTTTCTAGGGTCAGAGGACAGCTTTTGTAACTTTCCTAGGGATGTCCAC
GATCTCCTTAAGGCCTCGTTGGCTCAAACCCACATTACATACACCAAGAT
ATACCCCCGCTATAAGACCAGAGGACCTATACATGTTGCCCGCGACGATA
TCATCCGGTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012538KJC3_012538Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012538-T1KJC3_012538-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012538-T1.cdsKJC3_012538-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012538-T1.utr3p1KJC3_012538-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012538-T1.exon2KJC3_012538-T1.exon2Aspergillus niger KJC3exon
KJC3_012538-T1.exon1KJC3_012538-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012538-T1.utr5p1KJC3_012538-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029058
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3862321..3864140 -
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