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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3901905..3903562+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012552-T1 ID=KJC3_012552-T1|Name=KJC3_012552-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1658bp|location=Sequence derived from alignment at ch8:3901905..3903562+ (Aspergillus niger KJC3)
ATGAGCATGGAAACCAAGACACACCATGAGCGAACGGACACGATCGACCC
ACTTGCCCAACCCAACATCAAGACAGAGCTCGGAAATGGGCTCGAGAACA
TCGATCCTAATGCCCCAGTGCGGGTGCGCAGAGGATTTCTCCCGTGGTTG
TGTATGGTCCCATCTGTACAGGATCCCAGATCCTACAGCTCGGGCGTAAA
GTGGTTCTTGACCTTCATCGTTGCTGCTGGTGGTCTAGTCGTTCCATTGA
GCAGCGGCGTCTTGTTCCGTAAATTATCTCCGTTCCCCTTCGTAGACACA
GTGAAAGCTAACATGATGGTCGTCAAATAGCCTGCTTGCTTGAAATCGCC
GCGGACCTCGACACCACCGAATCTGTGGTCAACCTGTCCATCGCCTTTGG
TTCCCTTGCCGTGGCCATCACCCCCCTCTGGTGGTCCTACATCGCCGAAC
TCTACGGTCGCCGTCTCGTATATCTACTATCTTTCTTTTTCCTCGGCGTT
TTCTGTATTCTAGCAGCCATTAGCCCCAACATCGCCATGTTCATCGCCAT
GCGCCTTCTCGGCAGCGCCTCAAGCGCCTCCCTCCAATCCGTCAGCGCAG
GCACCATCTCTGACATGTTTGACACACACGAGCGCGGCAAGGCCATGGGC
GCCTTCATGCTAGGGCCCATGCTGGGCCCCATGTTTGCTCCCATCATCGG
CGGGGCGCTCACGATGCGTTGGGGCTGGCGCAGTACACAATGGTTCATGG
TAATCTACGGCTGGGCGGTGTTCATGGTGATGGTCTTCTTTTTACCAGAG
ACAGCGACAAATCTGGCAGAGACTCAGCGCGAGCACCGCGCTAACGCTAG
CAGCCCTGTCAAGAAAGCCGCCCACTTTCTCCTCAAGCCCATAGAGGCTG
CCAAGCTCCTCCAGTACCCGCCTATCCTAATTACGGTCTACTATACAGCG
ATTGTGTTTGCGACCTATTACCTTATTTGCGTCTCAATCGAGGATACCTT
CGCCGTGGCCCCCTACTATTGGAGTCCCGTGATTGTCGGGGTCGCGTACA
TTCCCGGAGGGCTGGGGTTGTTGTTCGGGGCAATCATCGGTGGTCGCTGG
CAGGATGCAATCATGGCACGCACGGCGCGCAAGGAGGGCCGATATGACGA
TGCAGGAGAGCTGATACTGCATCCCGTAGACCGGTTGGGGGAGAATTGCC
TGATGGCGGGCATTCTCTTCCCTGGTGCACTTTTGTGGTGGGGATGGTCA
GCCGAGAAGCAGATCTTCTGGCTGGTGCCGGTGAGTTCGCCATGTTATAC
CCTGATCGACATTTCCAGAACGGACAGAATGACTAATGCCCCTGATACTA
CTTAGCTGATCGGAAATTTCTTCTATGGCTTCAGTGGAATGATCCTCACC
AACGTGACCATGACCATGCTGACCGAGTTCACCCCTAAGAAATCGACCGT
TGGTGTGGCGGTGAACAACCTGCTCCGGAACAGCCTGTCGTGTGTCAGTG
CAGTCATCGCTCAACCGCTATTTGATGCCATCGGGACCGGATGGTCTTTC
ACAGCCGCTTGTATCTTCTGTCTGCTAAGTGGCATTCCGTTGATCCTTCT
GCGGATGAAGCGGGAGGAATGGAGCCGGAAGATGAAGGCTACGCTAGGGA
GTGAATAG back to topCoding sequence (CDS) from alignment at ch8:3901905..3903562+ >KJC3_012552-T1 ID=KJC3_012552-T1|Name=KJC3_012552-T1|organism=Aspergillus niger KJC3|type=CDS|length=4563bp|location=Sequence derived from alignment at ch8:3901905..3903562+ (Aspergillus niger KJC3)
ATGAGCATGGAAACCAAGACACACCATGAGCGAACGGACACGATCGACCC
ACTTGCCCAACCCAACATCAAGACAGAGCTCGGAAATGGGCTCGAGAACA
TCGATCCTAATGCCCCAGTGCGGGTGCGCAGAGGATTTCTCCCGTGGTTG
TGTATGGTCCCATCTGTACAGGATCCCAGATCCTACAGCTCGGGCGTAAA
GTGGTTCTTGACCTTCATCGTTGCTGCTGGTGGTCTAGTCGTTCCATTGA
GCAGCGGCGTCTTGTTCCCCTGCTTGCTTGAAATCGCCGCGGACCTCGAC
ACCACCGAATCTGTGGTCAACCTGTCCATCGCCTTTGGTTCCCTTGCCGT
GGCCATCACCCCCCTCTGGTGGTCCTACATCGCCGAACTCTACGGTCGCC
GTCTCGTATATCTACTATCTTTCTTTTTCCTCGGCGTTTTCTGTATTCTA
GCAGCCATTAGCCCCAACATCGCCATGTTCATCGCCATGCGCCTTCTCGG
CAGCGCCTCAAGCGCCTCCCTCCAATCCGTCAGCGCAGGCACCATCTCTG
ACATGTTTGACACACACGAGCGCGGCAAGGCCATGGGCGCCTTCATGCTA
GGGCCCATGCTGGGCCCCATGTTTGCTCCCATCATCGGCGGGGCGCTCAC
GATGCGTTGGGGCTGGCGCAGTACACAATGGTTCATGGTAATCTACGGCT
GGGCGGTGTTCATGGTGATGGTCTTCTTTTTACCAGAGACAGCGACAAAT
CTGGCAGAGACTCAGCGCGAGCACCGCGCTAACGCTAGCAGCCCTGTCAA
GAAAGCCGCCCACTTTCTCCTCAAGCCCATAGAGGCTGCCAAGCTCCTCC
AGTACCCGCCTATCCTAATTACGGTCTACTATACAGCGATTGTGTTTGCG
ACCTATTACCTTATTTGCGTCTCAATCGAGGATACCTTCGCCGTGGCCCC
CTACTATTGGAGTCCCGTGATTGTCGGGGTCGCGTACATTCCCGGAGGGC
TGGGGTTGTTGTTCGGGGCAATCATCGGTGGTCGCTGGCAGGATGCAATC
ATGGCACGCACGGCGCGCAAGGAGGGCCGATATGACGATGCAGGAGAGCT
GATACTGCATCCCGTAGACCGGTTGGGGGAGAATTGCCTGATGGCGGGCA
TTCTCTTCCCTGGTGCACTTTTGTGGTGGGGATGGTCAGCCGAGAAGCAG
ATCTTCTGGCTGGTGCCGCTGATCGGAAATTTCTTCTATGGCTTCAGTGG
AATGATCCTCACCAACGTGACCATGACCATGCTGACCGAGTTCACCCCTA
AGAAATCGACCGTTGGTGTGGCGGTGAACAACCTGCTCCGGAACAGCCTG
TCGTGTGTCAGTGCAGTCATCGCTCAACCGCTATTTGATGCCATCGGGAC
CGGATGGTCTTTCACAGCCGCTTGTATCTTCTGTCTGCTAAGTGGCATTC
CGTTGATCCTTCTGCGGATGAAGCGGGAGGAATGGAGCCGGAAGATGAAG
GCTACGCTAGGGAGTGAATAGATGAGCATGGAAACCAAGACACACCATGA
GCGAACGGACACGATCGACCCACTTGCCCAACCCAACATCAAGACAGAGC
TCGGAAATGGGCTCGAGAACATCGATCCTAATGCCCCAGTGCGGGTGCGC
AGAGGATTTCTCCCGTGGTTGTGTATGGTCCCATCTGTACAGGATCCCAG
ATCCTACAGCTCGGGCGTAAAGTGGTTCTTGACCTTCATCGTTGCTGCTG
GTGGTCTAGTCGTTCCATTGAGCAGCGGCGTCTTGTTCCCCTGCTTGCTT
GAAATCGCCGCGGACCTCGACACCACCGAATCTGTGGTCAACCTGTCCAT
CGCCTTTGGTTCCCTTGCCGTGGCCATCACCCCCCTCTGGTGGTCCTACA
TCGCCGAACTCTACGGTCGCCGTCTCGTATATCTACTATCTTTCTTTTTC
CTCGGCGTTTTCTGTATTCTAGCAGCCATTAGCCCCAACATCGCCATGTT
CATCGCCATGCGCCTTCTCGGCAGCGCCTCAAGCGCCTCCCTCCAATCCG
TCAGCGCAGGCACCATCTCTGACATGTTTGACACACACGAGCGCGGCAAG
GCCATGGGCGCCTTCATGCTAGGGCCCATGCTGGGCCCCATGTTTGCTCC
CATCATCGGCGGGGCGCTCACGATGCGTTGGGGCTGGCGCAGTACACAAT
GGTTCATGGTAATCTACGGCTGGGCGGTGTTCATGGTGATGGTCTTCTTT
TTACCAGAGACAGCGACAAATCTGGCAGAGACTCAGCGCGAGCACCGCGC
TAACGCTAGCAGCCCTGTCAAGAAAGCCGCCCACTTTCTCCTCAAGCCCA
TAGAGGCTGCCAAGCTCCTCCAGTACCCGCCTATCCTAATTACGGTCTAC
TATACAGCGATTGTGTTTGCGACCTATTACCTTATTTGCGTCTCAATCGA
GGATACCTTCGCCGTGGCCCCCTACTATTGGAGTCCCGTGATTGTCGGGG
TCGCGTACATTCCCGGAGGGCTGGGGTTGTTGTTCGGGGCAATCATCGGT
GGTCGCTGGCAGGATGCAATCATGGCACGCACGGCGCGCAAGGAGGGCCG
ATATGACGATGCAGGAGAGCTGATACTGCATCCCGTAGACCGGTTGGGGG
AGAATTGCCTGATGGCGGGCATTCTCTTCCCTGGTGCACTTTTGTGGTGG
GGATGGTCAGCCGAGAAGCAGATCTTCTGGCTGGTGCCGCTGATCGGAAA
TTTCTTCTATGGCTTCAGTGGAATGATCCTCACCAACGTGACCATGACCA
TGCTGACCGAGTTCACCCCTAAGAAATCGACCGTTGGTGTGGCGGTGAAC
AACCTGCTCCGGAACAGCCTGTCGTGTGTCAGTGCAGTCATCGCTCAACC
GCTATTTGATGCCATCGGGACCGGATGGTCTTTCACAGCCGCTTGTATCT
TCTGTCTGCTAAGTGGCATTCCGTTGATCCTTCTGCGGATGAAGCGGGAG
GAATGGAGCCGGAAGATGAAGGCTACGCTAGGGAGTGAATAGATGAGCAT
GGAAACCAAGACACACCATGAGCGAACGGACACGATCGACCCACTTGCCC
AACCCAACATCAAGACAGAGCTCGGAAATGGGCTCGAGAACATCGATCCT
AATGCCCCAGTGCGGGTGCGCAGAGGATTTCTCCCGTGGTTGTGTATGGT
CCCATCTGTACAGGATCCCAGATCCTACAGCTCGGGCGTAAAGTGGTTCT
TGACCTTCATCGTTGCTGCTGGTGGTCTAGTCGTTCCATTGAGCAGCGGC
GTCTTGTTCCCCTGCTTGCTTGAAATCGCCGCGGACCTCGACACCACCGA
ATCTGTGGTCAACCTGTCCATCGCCTTTGGTTCCCTTGCCGTGGCCATCA
CCCCCCTCTGGTGGTCCTACATCGCCGAACTCTACGGTCGCCGTCTCGTA
TATCTACTATCTTTCTTTTTCCTCGGCGTTTTCTGTATTCTAGCAGCCAT
TAGCCCCAACATCGCCATGTTCATCGCCATGCGCCTTCTCGGCAGCGCCT
CAAGCGCCTCCCTCCAATCCGTCAGCGCAGGCACCATCTCTGACATGTTT
GACACACACGAGCGCGGCAAGGCCATGGGCGCCTTCATGCTAGGGCCCAT
GCTGGGCCCCATGTTTGCTCCCATCATCGGCGGGGCGCTCACGATGCGTT
GGGGCTGGCGCAGTACACAATGGTTCATGGTAATCTACGGCTGGGCGGTG
TTCATGGTGATGGTCTTCTTTTTACCAGAGACAGCGACAAATCTGGCAGA
GACTCAGCGCGAGCACCGCGCTAACGCTAGCAGCCCTGTCAAGAAAGCCG
CCCACTTTCTCCTCAAGCCCATAGAGGCTGCCAAGCTCCTCCAGTACCCG
CCTATCCTAATTACGGTCTACTATACAGCGATTGTGTTTGCGACCTATTA
CCTTATTTGCGTCTCAATCGAGGATACCTTCGCCGTGGCCCCCTACTATT
GGAGTCCCGTGATTGTCGGGGTCGCGTACATTCCCGGAGGGCTGGGGTTG
TTGTTCGGGGCAATCATCGGTGGTCGCTGGCAGGATGCAATCATGGCACG
CACGGCGCGCAAGGAGGGCCGATATGACGATGCAGGAGAGCTGATACTGC
ATCCCGTAGACCGGTTGGGGGAGAATTGCCTGATGGCGGGCATTCTCTTC
CCTGGTGCACTTTTGTGGTGGGGATGGTCAGCCGAGAAGCAGATCTTCTG
GCTGGTGCCGCTGATCGGAAATTTCTTCTATGGCTTCAGTGGAATGATCC
TCACCAACGTGACCATGACCATGCTGACCGAGTTCACCCCTAAGAAATCG
ACCGTTGGTGTGGCGGTGAACAACCTGCTCCGGAACAGCCTGTCGTGTGT
CAGTGCAGTCATCGCTCAACCGCTATTTGATGCCATCGGGACCGGATGGT
CTTTCACAGCCGCTTGTATCTTCTGTCTGCTAAGTGGCATTCCGTTGATC
CTTCTGCGGATGAAGCGGGAGGAATGGAGCCGGAAGATGAAGGCTACGCT
AGGGAGTGAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.8 |
| Note | SMCOG1106:major facilitator transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3901905..3903562 + |
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