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KJC3_012559-T1, KJC3_012559-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012559-T1
Unique NameKJC3_012559-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:3916241..3917860-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012559-T1 ID=KJC3_012559-T1|Name=KJC3_012559-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1620bp|location=Sequence derived from alignment at ch8:3916241..3917860- (Aspergillus niger KJC3)
ATGCCTGTCCAATGGATACGAGATAGCTTCCTCGGCCAGACTTTGCGTCT
AATTTGTCGACCATCCTGTTTGGCGTATGCCGAAGAGCAAGAAGGCTGGA
TAGATACTGTCGAGATTAAACCCCTACCGCTTGACAACGAAAAAATCATT
TGCGTGGAATGGTATTCTGCCGATGACGAAGAGAACCCCCATAACTGGTC
TCAACTTAAGAAAGCATATATCCTTGGTGTCATTGGTGCGTACAGCTTTG
TGGTCTACATGTCCGCACCAATCTACACACCGAGCGAAAATGCCTTCATC
GAGGAATATCATGTGAACAAAGCCGAATCATCCCTAGGACTCGCTCTTTA
CGTGTAAGCACATTTCATTTAAGCATTTACTTCCCCGCTGCCCCGGATAA
GTTACTGACTGTTATTTAGTCTAGGTTACGGTGCAGGCCCCATGTTCTTC
AGTCCCCTCAGTGAGATCCCGCGTATAGGCCGTAGCCTCCCATACGTTAT
ATCCTTCATCTTTTACTGCATATTAAGCATACCCACGGCTTTGAGCCCTT
CCGCTACTGGCTTCTACGTTCTTCGCTTCCTCCAAGGATTCTTCGGAAGC
CCTTGTCTCGCTACTGGTGGCGCCTCAATTGCGGACATTTATTCCTCCGA
TGTATTGCCTCATGCAATGACGACCTGGGTACTGTCTGTCTTTTGTGCAC
CTGCTATTGGTGTATTAGTGTCCGGGTTTGCCATCCCAGTTCTTGGATGG
CGGTTCTCAATGTGGGAGATCCTGATCGCCTCTGCTCCAATCCTCATTCT
CCTTCTACTCCTCCCCGAAACTAGCTCAGCTACAATCTTACATCGCCGTG
CCCGTTGCTTGGAAAAGAACAACAAACCCGGAACACACAAATACCAGACA
GTGGCTGATATCCGTCAAGGAGATACGTCCTTCCATGCTGTCCTCCGAGA
GTCGCTACTCATCCCCTCAAAAATCACCCTTCTGGACCCGGCCATCCTAT
TCCTGAACTGCTACACCTCTCTCACGTACGGCATTTACTACTCCTTCTTC
GAAGCCTTCCCAATAGTATACCAAGGAATATACGGTTTCAACCTAGGGGA
AATGGGAATCGCTTTCCTCGCCATTGTGGTCGGATCGATCATTTCCTTCC
TCGTCTACAATTTCTACATCCACCGCGTTTATGCGCCCACTGTACGAAGC
AGTGGTCTTAAAAAGCCTGAGGATGTCTTGGTGCCCGCTCTTTTTGCATG
CTTTGGGCCATCTATTGGGCTTTTCCTCTTTGGCTGGGCGGCCAGGTCCG
ATGTCCATTGGATTGTCCCTACCATCGGCATTGTCATCTACCCCGGATGT
GTCTTCATTATAATGCAGTGTGTGTTTCTGTACATACCTGCTTGTCATCC
ACACTACGCGGCGAGTGTCTTTGCTGCCACTGACTTTACTCGAAGTGCTT
TTGCCTGTGGTTCTGTGATGTTCTCGCGGCCACTCTACGAGAACTTGGGC
TTGGGTCCAGGGTGCAGTCTCTTGGCTGGGTTAACTATTGGCTGTGTGGT
CGGGATTCATGTCCTGTATCGCTATGGGGAGGCATTGCGGCGGAGGTCGA
AGTTCAGTCGCGAGATTTGA
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Coding sequence (CDS) from alignment at ch8:3916241..3917860-

>KJC3_012559-T1 ID=KJC3_012559-T1|Name=KJC3_012559-T1|organism=Aspergillus niger KJC3|type=CDS|length=3108bp|location=Sequence derived from alignment at ch8:3916241..3917860- (Aspergillus niger KJC3)
TCTAGGTTACGGTGCAGGCCCCATGTTCTTCAGTCCCCTCAGTGAGATCC
CGCGTATAGGCCGTAGCCTCCCATACGTTATATCCTTCATCTTTTACTGC
ATATTAAGCATACCCACGGCTTTGAGCCCTTCCGCTACTGGCTTCTACGT
TCTTCGCTTCCTCCAAGGATTCTTCGGAAGCCCTTGTCTCGCTACTGGTG
GCGCCTCAATTGCGGACATTTATTCCTCCGATGTATTGCCTCATGCAATG
ACGACCTGGGTACTGTCTGTCTTTTGTGCACCTGCTATTGGTGTATTAGT
GTCCGGGTTTGCCATCCCAGTTCTTGGATGGCGGTTCTCAATGTGGGAGA
TCCTGATCGCCTCTGCTCCAATCCTCATTCTCCTTCTACTCCTCCCCGAA
ACTAGCTCAGCTACAATCTTACATCGCCGTGCCCGTTGCTTGGAAAAGAA
CAACAAACCCGGAACACACAAATACCAGACAGTGGCTGATATCCGTCAAG
GAGATACGTCCTTCCATGCTGTCCTCCGAGAGTCGCTACTCATCCCCTCA
AAAATCACCCTTCTGGACCCGGCCATCCTATTCCTGAACTGCTACACCTC
TCTCACGTACGGCATTTACTACTCCTTCTTCGAAGCCTTCCCAATAGTAT
ACCAAGGAATATACGGTTTCAACCTAGGGGAAATGGGAATCGCTTTCCTC
GCCATTGTGGTCGGATCGATCATTTCCTTCCTCGTCTACAATTTCTACAT
CCACCGCGTTTATGCGCCCACTGTACGAAGCAGTGGTCTTAAAAAGCCTG
AGGATGTCTTGGTGCCCGCTCTTTTTGCATGCTTTGGGCCATCTATTGGG
CTTTTCCTCTTTGGCTGGGCGGCCAGGTCCGATGTCCATTGGATTGTCCC
TACCATCGGCATTGTCATCTACCCCGGATGTGTCTTCATTATAATGCAGT
GTGTGTTTCTGTACATACCTGCTTGTCATCCACACTACGCGGCGAGTGTC
TTTGCTGCCACTGACTTTACTCGAAGTGCTTTTGCCTGTGGTTCTGTGAT
GTTCTCGCGGCCACTCTACGAGAACTTGGGCTTGGGTCCAGGGTGCAGTC
TCTTGGCTGGGTTAACTATTGGCTGTGTGGTCGGGATTCATGTCCTGTAT
CGCTATGGGGAGGCATTGCGGCGGAGGTCGAAGTTCAGTCGCGAGATTTG
AATGCCTGTCCAATGGATACGAGATAGCTTCCTCGGCCAGACTTTGCGTC
TAATTTGTCGACCATCCTGTTTGGCGTATGCCGAAGAGCAAGAAGGCTGG
ATAGATACTGTCGAGATTAAACCCCTACCGCTTGACAACGAAAAAATCAT
TTGCGTGGAATGGTATTCTGCCGATGACGAAGAGAACCCCCATAACTGGT
CTCAACTTAAGAAAGCATATATCCTTGGTGTCATTGGTGCGTACAGCTTT
GTGGTCTACATGTCCGCACCAATCTACACACCGAGCGAAAATGCCTTCAT
CGAGGAATATCATGTGAACAAAGCCGAATCATCCCTAGGACTCGCTCTTT
ACGTTCTAGGTTACGGTGCAGGCCCCATGTTCTTCAGTCCCCTCAGTGAG
ATCCCGCGTATAGGCCGTAGCCTCCCATACGTTATATCCTTCATCTTTTA
CTGCATATTAAGCATACCCACGGCTTTGAGCCCTTCCGCTACTGGCTTCT
ACGTTCTTCGCTTCCTCCAAGGATTCTTCGGAAGCCCTTGTCTCGCTACT
GGTGGCGCCTCAATTGCGGACATTTATTCCTCCGATGTATTGCCTCATGC
AATGACGACCTGGGTACTGTCTGTCTTTTGTGCACCTGCTATTGGTGTAT
TAGTGTCCGGGTTTGCCATCCCAGTTCTTGGATGGCGGTTCTCAATGTGG
GAGATCCTGATCGCCTCTGCTCCAATCCTCATTCTCCTTCTACTCCTCCC
CGAAACTAGCTCAGCTACAATCTTACATCGCCGTGCCCGTTGCTTGGAAA
AGAACAACAAACCCGGAACACACAAATACCAGACAGTGGCTGATATCCGT
CAAGGAGATACGTCCTTCCATGCTGTCCTCCGAGAGTCGCTACTCATCCC
CTCAAAAATCACCCTTCTGGACCCGGCCATCCTATTCCTGAACTGCTACA
CCTCTCTCACGTACGGCATTTACTACTCCTTCTTCGAAGCCTTCCCAATA
GTATACCAAGGAATATACGGTTTCAACCTAGGGGAAATGGGAATCGCTTT
CCTCGCCATTGTGGTCGGATCGATCATTTCCTTCCTCGTCTACAATTTCT
ACATCCACCGCGTTTATGCGCCCACTGTACGAAGCAGTGGTCTTAAAAAG
CCTGAGGATGTCTTGGTGCCCGCTCTTTTTGCATGCTTTGGGCCATCTAT
TGGGCTTTTCCTCTTTGGCTGGGCGGCCAGGTCCGATGTCCATTGGATTG
TCCCTACCATCGGCATTGTCATCTACCCCGGATGTGTCTTCATTATAATG
CAGTGTGTGTTTCTGTACATACCTGCTTGTCATCCACACTACGCGGCGAG
TGTCTTTGCTGCCACTGACTTTACTCGAAGTGCTTTTGCCTGTGGTTCTG
TGATGTTCTCGCGGCCACTCTACGAGAACTTGGGCTTGGGTCCAGGGTGC
AGTCTCTTGGCTGGGTTAACTATTGGCTGTGTGGTCGGGATTCATGTCCT
GTATCGCTATGGGGAGGCATTGCGGCGGAGGTCGAAGTTCAGTCGCGAGA
TTTGAATGCCTGTCCAATGGATACGAGATAGCTTCCTCGGCCAGACTTTG
CGTCTAATTTGTCGACCATCCTGTTTGGCGTATGCCGAAGAGCAAGAAGG
CTGGATAGATACTGTCGAGATTAAACCCCTACCGCTTGACAACGAAAAAA
TCATTTGCGTGGAATGGTATTCTGCCGATGACGAAGAGAACCCCCATAAC
TGGTCTCAACTTAAGAAAGCATATATCCTTGGTGTCATTGGTGCGTACAG
CTTTGTGGTCTACATGTCCGCACCAATCTACACACCGAGCGAAAATGCCT
TCATCGAGGAATATCATGTGAACAAAGCCGAATCATCCCTAGGACTCGCT
CTTTACGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012559KJC3_012559Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012559-T1KJC3_012559-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012559-T1.cdsKJC3_012559-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012559-T1.exon2KJC3_012559-T1.exon2Aspergillus niger KJC3exon
KJC3_012559-T1.exon1KJC3_012559-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_8.8
NoteSMCOG1106:major facilitator transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:3916241..3917860 -
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