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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3979165..3980802+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012581-T2 ID=KJC3_012581-T2|Name=KJC3_012581-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1638bp|location=Sequence derived from alignment at ch8:3979165..3980802+ (Aspergillus niger KJC3)
ATGAGCTCCTCCGAGGTGGACAGCAAATATGCTTGGGTGATAGTGCTGGC
AGTGTTTTGGAACAATGCTCACCATTGGGGAATCCTATCTGTTAGTATCA
CCTTCTAGTTCACCACACTTGCACTGACACCATTCAGAGCTACGGTGTCT
TCCTTGCCTACTTTACCTCCCATTCCACATTCCCCGGGAGTCGAACTCTC
GATTATGCCTTTATCGGAGGTCTCTCCGCCTCGCAGGCACTATTTATCTC
CCCAATAGTCAGTATCCTCCACCGCCGCATGGGCTTGAAAGCAACAATGG
CATTGGGGGTCTTGCTCGAAACCGCTGCATTTTTGGGAGCTTCCTGGAGC
CATGAGATCTGGCAACTCTACCTTAGTCAAGGCGTCTGCTTCGGCTGGGG
TCTCGGATTGCAGTATCTCTCGACAACCTACCTCATACCCCAATGGTTCA
GCCGTCATCGCAGTCTCGCAGCCGGCATTGCAACCGGCGGCAGTGGAACA
GGAGGCTTGATTTACTCTCTTTCGACGCATGCCCTTCTCGCGCGGTTCGG
CCTCAGCTGGTCCTACCGTATCCTTGCCATTTGCCAGCTCGTCGTCAACG
CAACTTGTTTGCTTGTCATACGCGATAGGAAAACGGTAGCAGCACCCAGC
CGATCGGTTCATACTATCCTCCGTCTCTGCACCCGGTACGAGATGTGGTT
GTACCTCGGCTGGAGCTTCTTCAGTGTAATGGGGTTCATGGTCATCTGGT
TCTCGCTGGCCACGTATGGTCGCAGCGTTGGGTTGACCTTGAGCCAAGGC
TCGATTGTCACGGCGGTCATGAATGTTGGCCAGATGGTGGGGCGTCCGGC
CGTGGGGTTTATGTCAGATGCCGTCGGTCGCATCAACATCGCTACTATCG
CAACCTTCGTCAGTGGCTTGCTTTGTTTGTTGTTATGGACTTTTGCCCGC
ACTTACGCTGCTCTGATCTGCTTCGCCTTGTTTGCAGGCATCTTCTTTGG
CACCTTCTGGACGGTATCTCATTCCTCACTGTCTCCTGTCTTATCTTCTC
GGCGTGGACGCTAACAGTCAAATGAAACGGCATACAGGTGGTCGGTCCAC
TTGGAGCAGAGGTCTTCGCGTTGGAGGATCTGCAGTCGGGCTTGACAATT
ATATGGCTGATCTGTTCGGTCCCTGCTACGTGTAAGTCTTTCTGTTTCTT
CTCTGCACCACCACTTTTCTTCTGAAGATGACTTCTCAAGATACTGATCA
AGACGGGAAAAACAGTTGGAGAAGCCATCGGCCTCGAGCTGCGAACCTCG
GGAAGGCATGGATTTTTACACACGCAACTATTCACGGGATTCATGTACAT
CGGCGCCGCGCTATGCTTAGTCCTGCTCCGAGGGTGGAAGATTGGCGAAC
TCCGGAAACAGCAGCAGCAGCAGGAAGGCATTACAATGGCACGCGCCGCA
AGTAAGAAGTATCTGAACTTTGTCGCCGCGACGCCAAAGGTGTAACGCTA
TATAAACTGCGTATCTGGCTTTAGGGTACAGAGGATGAAAACTTTCTGGA
GCGATAAGTAGAGGGGATTAGTTATATCTTTTATTGTAACATTAGTCTAA
CCCCTGCTGCTCGGTGGCTTGCGATGTATCGTTTCTGC back to topCoding sequence (CDS) from alignment at ch8:3979165..3980802+ >KJC3_012581-T2 ID=KJC3_012581-T2|Name=KJC3_012581-T2|organism=Aspergillus niger KJC3|type=CDS|length=2034bp|location=Sequence derived from alignment at ch8:3979165..3980802+ (Aspergillus niger KJC3)
ATGAGCTCCTCCGAGGTGGACAGCAAATATGCTTGGGTGATAGTGCTGGC
AGTGTTTTGGAACAATGCTCACCATTGGGGAATCCTATCTAGCTACGGTG
TCTTCCTTGCCTACTTTACCTCCCATTCCACATTCCCCGGGAGTCGAACT
CTCGATTATGCCTTTATCGGAGGTCTCTCCGCCTCGCAGGCACTATTTAT
CTCCCCAATAGTCAGTATCCTCCACCGCCGCATGGGCTTGAAAGCAACAA
TGGCATTGGGGGTCTTGCTCGAAACCGCTGCATTTTTGGGAGCTTCCTGG
AGCCATGAGATCTGGCAACTCTACCTTAGTCAAGGCGTCTGCTTCGGCTG
GGGTCTCGGATTGCAGTATCTCTCGACAACCTACCTCATACCCCAATGGT
TCAGCCGTCATCGCAGTCTCGCAGCCGGCATTGCAACCGGCGGCAGTGGA
ACAGGAGGCTTGATTTACTCTCTTTCGACGCATGCCCTTCTCGCGCGGTT
CGGCCTCAGCTGGTCCTACCGTATCCTTGCCATTTGCCAGCTCGTCGTCA
ACGCAACTTGTTTGCTTGTCATACGCGATAGGAAAACGGTAGCAGCACCC
AGCCGATCGGTTCATACTATCCTCCGTCTCTGCACCCGGTACGAGATGTG
GTTGTACCTCGGCTGGAGCTTCTTCAGTGTAATGGGGTTCATGGTCATCT
GGTTCTCGCTGGCCACGTATGGTCGCAGCGTTGGGTTGACCTTGAGCCAA
GGCTCGATTGTCACGGCGGTCATGAATGTTGGCCAGATGGTGGGGCGTCC
GGCCGTGGGGTTTATGTCAGATGCCGTCGGTCGCATCAACATCGCTACTA
TCGCAACCTTCGTCAGTGGCTTGCTTTGTTTGTTGTTATGGACTTTTGCC
CGCACTTACGCTGCTCTGATCTGCTTCGCCTTGTTTGCAGGCATCTTCTT
TGGCACCTTCTGGACGGTATCTCATTCCTCACTGTCTCCTGTCTTATCTT
CTCGGCGTGGACGCTAAATGAGCTCCTCCGAGGTGGACAGCAAATATGCT
TGGGTGATAGTGCTGGCAGTGTTTTGGAACAATGCTCACCATTGGGGAAT
CCTATCTAGCTACGGTGTCTTCCTTGCCTACTTTACCTCCCATTCCACAT
TCCCCGGGAGTCGAACTCTCGATTATGCCTTTATCGGAGGTCTCTCCGCC
TCGCAGGCACTATTTATCTCCCCAATAGTCAGTATCCTCCACCGCCGCAT
GGGCTTGAAAGCAACAATGGCATTGGGGGTCTTGCTCGAAACCGCTGCAT
TTTTGGGAGCTTCCTGGAGCCATGAGATCTGGCAACTCTACCTTAGTCAA
GGCGTCTGCTTCGGCTGGGGTCTCGGATTGCAGTATCTCTCGACAACCTA
CCTCATACCCCAATGGTTCAGCCGTCATCGCAGTCTCGCAGCCGGCATTG
CAACCGGCGGCAGTGGAACAGGAGGCTTGATTTACTCTCTTTCGACGCAT
GCCCTTCTCGCGCGGTTCGGCCTCAGCTGGTCCTACCGTATCCTTGCCAT
TTGCCAGCTCGTCGTCAACGCAACTTGTTTGCTTGTCATACGCGATAGGA
AAACGGTAGCAGCACCCAGCCGATCGGTTCATACTATCCTCCGTCTCTGC
ACCCGGTACGAGATGTGGTTGTACCTCGGCTGGAGCTTCTTCAGTGTAAT
GGGGTTCATGGTCATCTGGTTCTCGCTGGCCACGTATGGTCGCAGCGTTG
GGTTGACCTTGAGCCAAGGCTCGATTGTCACGGCGGTCATGAATGTTGGC
CAGATGGTGGGGCGTCCGGCCGTGGGGTTTATGTCAGATGCCGTCGGTCG
CATCAACATCGCTACTATCGCAACCTTCGTCAGTGGCTTGCTTTGTTTGT
TGTTATGGACTTTTGCCCGCACTTACGCTGCTCTGATCTGCTTCGCCTTG
TTTGCAGGCATCTTCTTTGGCACCTTCTGGACGGTATCTCATTCCTCACT
GTCTCCTGTCTTATCTTCTCGGCGTGGACGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3979165..3980802 + |
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