You are here

Home

KJC3_012596-T1, KJC3_012596-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012596-T1
Unique NameKJC3_012596-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4023352..4024560-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012596-T1 ID=KJC3_012596-T1|Name=KJC3_012596-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1209bp|location=Sequence derived from alignment at ch8:4023352..4024560- (Aspergillus niger KJC3)
ATGGCTGCATCTGAGACCAGCATTCCTTCCCACTGCAAGGCGGGTGTTGT
TGTCAATCCGGGGCCCAACTTTGAGGTCCGAGTGGAAATGGTAGAAGTAC
CGCAACCAGGTAAACTTTCGAGTCCTCTTCAAATCACACTCCGCCGGTTC
TGTGTCGCTGACATATACAGGCCCGGACGATCTACTCGTTCGTCTGCGAG
CTACAGGTATCTGTTCATCCGATCTTCATATGATGCAAGGCGACCTTGGT
ACGCCGCCAATGTCAGCTTTCGGCGTTCGATCACCGGGTCATGAAGGAGT
AGGCATCGTAGTCAAGATCGGTGCAAATGTGCGCAATTTTAAAGTCGGGG
ATCGAGCTGGAATCAAGCCATTGCTTGACACGTGTGGAGCATGCGAGAGA
TGCTGGGGGGACAAGGAGATGCACTGCCGGAGTGGTATTCATACAGGGCT
CATGGCACCTGGTAGGCTATGAGATTATACGTACCTCTGAGACCTTCTTG
ATCTAACTCGACGATAGGAACATATCAGCAATATATTGTCTCCCCCGCTC
GCTATGCTTCACCAATTCCGGATACCGTACCCGATAATGTTGCTGCTCCT
ATTATGTGTAGCGCAGCCACTATGTATAGGTCTTTGAGAGAATCTGGGCT
GAAGGCCGGAGATTGGGCTGTGTTTCCTGGTGGTGGCGGTGGTGTGGGTA
TCCAGGGAGTCCAAATTGCCAAAGCGATGGGCATCCGACCGATTGTTGTC
GATTCCGGGGAGACTAAGCGCGCTCTGGCTCTGGAGATGGGTGCCGAGAG
CTTCGTGGACTTCAAAGAGACGACTGACACAGCAGCTTCTGTCATTGCTG
TAGCCGACAACATTGGGGCTCATGGGGTATTTGTCACAGCACCTGCTGCC
TATCGAAATGCATTATCTTATCTGGGAGACCGCATAGGGGCTATCGTGAT
GTGTGTTGGACTGGCCCCGAAGGACTCGATGACAATCAGCAGTGATCCTA
ACTTTCTTATTTTTAACAATACGACCATCAAAGGAACCCTGGTTGGGAGC
CGCAGCGACGTTGCAGCGTCGTTAGACTTGGCTTGCCGAGGACACTTGAA
ACAGATTTGCGAGGTATATCCCATTGACCAACTACCCGAAGCAGTGAAAA
GGCTCCGGACAGGCCAAGTTGCAGGCCGTATTGTCGTGAACTTTGACCTT
GCGAGCTAG
back to top

Coding sequence (CDS) from alignment at ch8:4023352..4024560-

>KJC3_012596-T1 ID=KJC3_012596-T1|Name=KJC3_012596-T1|organism=Aspergillus niger KJC3|type=CDS|length=3276bp|location=Sequence derived from alignment at ch8:4023352..4024560- (Aspergillus niger KJC3)
GAACATATCAGCAATATATTGTCTCCCCCGCTCGCTATGCTTCACCAATT
CCGGATACCGTACCCGATAATGTTGCTGCTCCTATTATGTGTAGCGCAGC
CACTATGTATAGGTCTTTGAGAGAATCTGGGCTGAAGGCCGGAGATTGGG
CTGTGTTTCCTGGTGGTGGCGGTGGTGTGGGTATCCAGGGAGTCCAAATT
GCCAAAGCGATGGGCATCCGACCGATTGTTGTCGATTCCGGGGAGACTAA
GCGCGCTCTGGCTCTGGAGATGGGTGCCGAGAGCTTCGTGGACTTCAAAG
AGACGACTGACACAGCAGCTTCTGTCATTGCTGTAGCCGACAACATTGGG
GCTCATGGGGTATTTGTCACAGCACCTGCTGCCTATCGAAATGCATTATC
TTATCTGGGAGACCGCATAGGGGCTATCGTGATGTGTGTTGGACTGGCCC
CGAAGGACTCGATGACAATCAGCAGTGATCCTAACTTTCTTATTTTTAAC
AATACGACCATCAAAGGAACCCTGGTTGGGAGCCGCAGCGACGTTGCAGC
GTCGTTAGACTTGGCTTGCCGAGGACACTTGAAACAGATTTGCGAGGTAT
ATCCCATTGACCAACTACCCGAAGCAGTGAAAAGGCTCCGGACAGGCCAA
GTTGCAGGCCGTATTGTCGTGAACTTTGACCTTGCGAGCTAGGCCCGGAC
GATCTACTCGTTCGTCTGCGAGCTACAGGTATCTGTTCATCCGATCTTCA
TATGATGCAAGGCGACCTTGGTACGCCGCCAATGTCAGCTTTCGGCGTTC
GATCACCGGGTCATGAAGGAGTAGGCATCGTAGTCAAGATCGGTGCAAAT
GTGCGCAATTTTAAAGTCGGGGATCGAGCTGGAATCAAGCCATTGCTTGA
CACGTGTGGAGCATGCGAGAGATGCTGGGGGGACAAGGAGATGCACTGCC
GGAGTGGTATTCATACAGGGCTCATGGCACCTGATGGCTGCATCTGAGAC
CAGCATTCCTTCCCACTGCAAGGCGGGTGTTGTTGTCAATCCGGGGCCCA
ACTTTGAGGTCCGAGTGGAAATGGTAGAAGTACCGCAACCAGGAACATAT
CAGCAATATATTGTCTCCCCCGCTCGCTATGCTTCACCAATTCCGGATAC
CGTACCCGATAATGTTGCTGCTCCTATTATGTGTAGCGCAGCCACTATGT
ATAGGTCTTTGAGAGAATCTGGGCTGAAGGCCGGAGATTGGGCTGTGTTT
CCTGGTGGTGGCGGTGGTGTGGGTATCCAGGGAGTCCAAATTGCCAAAGC
GATGGGCATCCGACCGATTGTTGTCGATTCCGGGGAGACTAAGCGCGCTC
TGGCTCTGGAGATGGGTGCCGAGAGCTTCGTGGACTTCAAAGAGACGACT
GACACAGCAGCTTCTGTCATTGCTGTAGCCGACAACATTGGGGCTCATGG
GGTATTTGTCACAGCACCTGCTGCCTATCGAAATGCATTATCTTATCTGG
GAGACCGCATAGGGGCTATCGTGATGTGTGTTGGACTGGCCCCGAAGGAC
TCGATGACAATCAGCAGTGATCCTAACTTTCTTATTTTTAACAATACGAC
CATCAAAGGAACCCTGGTTGGGAGCCGCAGCGACGTTGCAGCGTCGTTAG
ACTTGGCTTGCCGAGGACACTTGAAACAGATTTGCGAGGTATATCCCATT
GACCAACTACCCGAAGCAGTGAAAAGGCTCCGGACAGGCCAAGTTGCAGG
CCGTATTGTCGTGAACTTTGACCTTGCGAGCTAGGCCCGGACGATCTACT
CGTTCGTCTGCGAGCTACAGGTATCTGTTCATCCGATCTTCATATGATGC
AAGGCGACCTTGGTACGCCGCCAATGTCAGCTTTCGGCGTTCGATCACCG
GGTCATGAAGGAGTAGGCATCGTAGTCAAGATCGGTGCAAATGTGCGCAA
TTTTAAAGTCGGGGATCGAGCTGGAATCAAGCCATTGCTTGACACGTGTG
GAGCATGCGAGAGATGCTGGGGGGACAAGGAGATGCACTGCCGGAGTGGT
ATTCATACAGGGCTCATGGCACCTGATGGCTGCATCTGAGACCAGCATTC
CTTCCCACTGCAAGGCGGGTGTTGTTGTCAATCCGGGGCCCAACTTTGAG
GTCCGAGTGGAAATGGTAGAAGTACCGCAACCAGGAACATATCAGCAATA
TATTGTCTCCCCCGCTCGCTATGCTTCACCAATTCCGGATACCGTACCCG
ATAATGTTGCTGCTCCTATTATGTGTAGCGCAGCCACTATGTATAGGTCT
TTGAGAGAATCTGGGCTGAAGGCCGGAGATTGGGCTGTGTTTCCTGGTGG
TGGCGGTGGTGTGGGTATCCAGGGAGTCCAAATTGCCAAAGCGATGGGCA
TCCGACCGATTGTTGTCGATTCCGGGGAGACTAAGCGCGCTCTGGCTCTG
GAGATGGGTGCCGAGAGCTTCGTGGACTTCAAAGAGACGACTGACACAGC
AGCTTCTGTCATTGCTGTAGCCGACAACATTGGGGCTCATGGGGTATTTG
TCACAGCACCTGCTGCCTATCGAAATGCATTATCTTATCTGGGAGACCGC
ATAGGGGCTATCGTGATGTGTGTTGGACTGGCCCCGAAGGACTCGATGAC
AATCAGCAGTGATCCTAACTTTCTTATTTTTAACAATACGACCATCAAAG
GAACCCTGGTTGGGAGCCGCAGCGACGTTGCAGCGTCGTTAGACTTGGCT
TGCCGAGGACACTTGAAACAGATTTGCGAGGTATATCCCATTGACCAACT
ACCCGAAGCAGTGAAAAGGCTCCGGACAGGCCAAGTTGCAGGCCGTATTG
TCGTGAACTTTGACCTTGCGAGCTAGGCCCGGACGATCTACTCGTTCGTC
TGCGAGCTACAGGTATCTGTTCATCCGATCTTCATATGATGCAAGGCGAC
CTTGGTACGCCGCCAATGTCAGCTTTCGGCGTTCGATCACCGGGTCATGA
AGGAGTAGGCATCGTAGTCAAGATCGGTGCAAATGTGCGCAATTTTAAAG
TCGGGGATCGAGCTGGAATCAAGCCATTGCTTGACACGTGTGGAGCATGC
GAGAGATGCTGGGGGGACAAGGAGATGCACTGCCGGAGTGGTATTCATAC
AGGGCTCATGGCACCTGATGGCTGCATCTGAGACCAGCATTCCTTCCCAC
TGCAAGGCGGGTGTTGTTGTCAATCCGGGGCCCAACTTTGAGGTCCGAGT
GGAAATGGTAGAAGTACCGCAACCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012596KJC3_012596Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012596-T1KJC3_012596-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012596-T1.cdsKJC3_012596-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012596-T1.exon3KJC3_012596-T1.exon3Aspergillus niger KJC3exon
KJC3_012596-T1.exon2KJC3_012596-T1.exon2Aspergillus niger KJC3exon
KJC3_012596-T1.exon1KJC3_012596-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002328
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR020843
DBxrefPFAM:PF13602
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4023352..4024560 -
Powered by Drupal