|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4048227..4050028- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012605-T1 ID=KJC3_012605-T1|Name=KJC3_012605-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1802bp|location=Sequence derived from alignment at ch8:4048227..4050028- (Aspergillus niger KJC3)
AGAAAGCCACGAACTCGTCTGCCCTGCTTTGGAAAAGATACAAACAGTAT
TAATCACAAGCGGCTTTCCATCACTCCAGAATGCCACCAAACACTCCCGG
CCATGCGATTGTTTACGGCGCATCAGGTTTAATTGGCTGGGCGCTAATAA
ACCAGCTCTTAAGTCCGTACCCTGTCGCTGATACATTCAAAAAGGTCACA
GCTGTCACGAATAGACCACTCGATCTCTCTGAGACATACTGGCCAGAGGC
AGACTCTCACCGGCCCCGGCTGCAGTTGGCCTCGGGCGTTGATCTTCGCA
GCTGGGATCGGGATAGACTGGTGGAGTGGTTGAGGCAGGTTGTTGAGGAT
AGTCAGGGCGTGACTCATGTCTATTACTTGGGTATAGCTATGTTCGAGGT
GGTTGATGAATAGAGAGTTTACTTACAATGAGTAGTCTTCACCGCTATGG
ACGACGACCTGGAAGAAGTCGCTACCAACCGACGGATGCTGCAGAATGTC
ATTGATGCTCATAACCTAATCAGTCCCAAATTACAGTTCGTCTCCTTTGT
GGGTGGGACACGGGTAAGCATAGTCTATCTATACAACTTGTGTAAGAAAC
ACTTTTGACCAGATATCAACCAGGGATACGGCATCTATTCCCCCGGCGGG
ACATTCATCCCACCGCTACACGAAGAATTGGTTAACAACCTCCCTCCAGA
CTACGCCAAGACTGTCGTTTATCCCGCATATCGCGAGATACTCAGTACAT
CCAGCCAGGGAAGGAATTGGACTTGGTGTGAAGTGTGTCCGGATGCAATT
GTTAGTTCCTCCTTCACCTTCATCCTGACGAATGCAACGATTAACTGTAA
CCGTAATAACAGGTTGGTTTCACCCCCAATGGATCGCAATTCAGTCTGGC
ATTGCACTGGGCGCAATACTTATCCCTATATGCCTACAATAATGGCATCG
GACCACATACTCAGGGAAGCGCCAAGCCAGCTGTAGAGGTCCCGTTCCCC
GGATCCATAGCAGGCGCTACGTCGTTATTTACTCCCGTATCCAGTAACCG
ACTTGCACGGTTCATGATATTTGCATCCTTACATCCAGAGACGTGCGGGG
GTGGTCGGCTGTTCAATGTCGCTGACCAGCCGACACCTTGTACGTACGGA
TCACTGTGGCCTCGGCTGGCAGAATGGTTTGGTCTCGTGGGCGTGCCGCC
TGTTGACCCTGCTCCAGAAGGCGAGCATAATAAGCTAAAAGTTGGGGAAG
TCCCTGAGCGGGCTTCAACGCTCGCGCCTGGAGAGTATATAACTAAATAT
CGGGAAATCTTTACCCGTTATGGATGTCCGAAAGCTGTTACTGGCGGGGT
CGGAGTGGGGTATCGTCAGTTGGATAGTGTCGGGTATTGGTTAACTTTTG
ATCGGCAGTTGAGTCTGGAAAAGCTTCAGGAGACTGGCTTTGAGGGGAAT
CAGGATCCGGTAGAGGGCTGGTTGGAGAGTTTTGCGATGTTTCGCAGGGC
GGGGTTGATTCTGTGATGTGGTGCCGAGGATATATACACGGCTTGTTGAA
GGGGTTGGGGATTGTAAAAGAAGCGTTTCCTAGTAATTCTGTACTAAAGG
TATAAGACTGTACTATAAGCATTGTGTTTGCTTATATATAAGCCGTATTG
TTTGACCTGAGTAGCAAAGGTTGTGAACAGGCTTTGGGGATATCTCGTGC
AGATTGCTCTCGTTGTTGGTGCCTCAGGCAGACGTAGTCTAAAGTGGGGG
TGGCAGGCACAATCAACAGGAACAACGAGGCCAAGAACGCCATGGTCTGG
GC back to topCoding sequence (CDS) from alignment at ch8:4048227..4050028- >KJC3_012605-T1 ID=KJC3_012605-T1|Name=KJC3_012605-T1|organism=Aspergillus niger KJC3|type=CDS|length=5040bp|location=Sequence derived from alignment at ch8:4048227..4050028- (Aspergillus niger KJC3)
GTTGGTTTCACCCCCAATGGATCGCAATTCAGTCTGGCATTGCACTGGGC
GCAATACTTATCCCTATATGCCTACAATAATGGCATCGGACCACATACTC
AGGGAAGCGCCAAGCCAGCTGTAGAGGTCCCGTTCCCCGGATCCATAGCA
GGCGCTACGTCGTTATTTACTCCCGTATCCAGTAACCGACTTGCACGGTT
CATGATATTTGCATCCTTACATCCAGAGACGTGCGGGGGTGGTCGGCTGT
TCAATGTCGCTGACCAGCCGACACCTTGTACGTACGGATCACTGTGGCCT
CGGCTGGCAGAATGGTTTGGTCTCGTGGGCGTGCCGCCTGTTGACCCTGC
TCCAGAAGGCGAGCATAATAAGCTAAAAGTTGGGGAAGTCCCTGAGCGGG
CTTCAACGCTCGCGCCTGGAGAGTATATAACTAAATATCGGGAAATCTTT
ACCCGTTATGGATGTCCGAAAGCTGTTACTGGCGGGGTCGGAGTGGGGTA
TCGTCAGTTGGATAGTGTCGGGTATTGGTTAACTTTTGATCGGCAGTTGA
GTCTGGAAAAGCTTCAGGAGACTGGCTTTGAGGGGAATCAGGATCCGGTA
GAGGGCTGGTTGGAGAGTTTTGCGATGTTTCGCAGGGCGGGGTTGATTCT
GTGAGGATACGGCATCTATTCCCCCGGCGGGACATTCATCCCACCGCTAC
ACGAAGAATTGGTTAACAACCTCCCTCCAGACTACGCCAAGACTGTCGTT
TATCCCGCATATCGCGAGATACTCAGTACATCCAGCCAGGGAAGGAATTG
GACTTGGTGTGAAGTGTGTCCGGATGCAATTTCTTCACCGCTATGGACGA
CGACCTGGAAGAAGTCGCTACCAACCGACGGATGCTGCAGAATGTCATTG
ATGCTCATAACCTAATCAGTCCCAAATTACAGTTCGTCTCCTTTGTGGGT
GGGACACGGATGCCACCAAACACTCCCGGCCATGCGATTGTTTACGGCGC
ATCAGGTTTAATTGGCTGGGCGCTAATAAACCAGCTCTTAAGTCCGTACC
CTGTCGCTGATACATTCAAAAAGGTCACAGCTGTCACGAATAGACCACTC
GATCTCTCTGAGACATACTGGCCAGAGGCAGACTCTCACCGGCCCCGGCT
GCAGTTGGCCTCGGGCGTTGATCTTCGCAGCTGGGATCGGGATAGACTGG
TGGAGTGGTTGAGGCAGGTTGTTGAGGATAGTCAGGGCGTGACTCATGTC
TATTACTTGGGTTGGTTTCACCCCCAATGGATCGCAATTCAGTCTGGCAT
TGCACTGGGCGCAATACTTATCCCTATATGCCTACAATAATGGCATCGGA
CCACATACTCAGGGAAGCGCCAAGCCAGCTGTAGAGGTCCCGTTCCCCGG
ATCCATAGCAGGCGCTACGTCGTTATTTACTCCCGTATCCAGTAACCGAC
TTGCACGGTTCATGATATTTGCATCCTTACATCCAGAGACGTGCGGGGGT
GGTCGGCTGTTCAATGTCGCTGACCAGCCGACACCTTGTACGTACGGATC
ACTGTGGCCTCGGCTGGCAGAATGGTTTGGTCTCGTGGGCGTGCCGCCTG
TTGACCCTGCTCCAGAAGGCGAGCATAATAAGCTAAAAGTTGGGGAAGTC
CCTGAGCGGGCTTCAACGCTCGCGCCTGGAGAGTATATAACTAAATATCG
GGAAATCTTTACCCGTTATGGATGTCCGAAAGCTGTTACTGGCGGGGTCG
GAGTGGGGTATCGTCAGTTGGATAGTGTCGGGTATTGGTTAACTTTTGAT
CGGCAGTTGAGTCTGGAAAAGCTTCAGGAGACTGGCTTTGAGGGGAATCA
GGATCCGGTAGAGGGCTGGTTGGAGAGTTTTGCGATGTTTCGCAGGGCGG
GGTTGATTCTGTGAGGATACGGCATCTATTCCCCCGGCGGGACATTCATC
CCACCGCTACACGAAGAATTGGTTAACAACCTCCCTCCAGACTACGCCAA
GACTGTCGTTTATCCCGCATATCGCGAGATACTCAGTACATCCAGCCAGG
GAAGGAATTGGACTTGGTGTGAAGTGTGTCCGGATGCAATTTCTTCACCG
CTATGGACGACGACCTGGAAGAAGTCGCTACCAACCGACGGATGCTGCAG
AATGTCATTGATGCTCATAACCTAATCAGTCCCAAATTACAGTTCGTCTC
CTTTGTGGGTGGGACACGGATGCCACCAAACACTCCCGGCCATGCGATTG
TTTACGGCGCATCAGGTTTAATTGGCTGGGCGCTAATAAACCAGCTCTTA
AGTCCGTACCCTGTCGCTGATACATTCAAAAAGGTCACAGCTGTCACGAA
TAGACCACTCGATCTCTCTGAGACATACTGGCCAGAGGCAGACTCTCACC
GGCCCCGGCTGCAGTTGGCCTCGGGCGTTGATCTTCGCAGCTGGGATCGG
GATAGACTGGTGGAGTGGTTGAGGCAGGTTGTTGAGGATAGTCAGGGCGT
GACTCATGTCTATTACTTGGGTTGGTTTCACCCCCAATGGATCGCAATTC
AGTCTGGCATTGCACTGGGCGCAATACTTATCCCTATATGCCTACAATAA
TGGCATCGGACCACATACTCAGGGAAGCGCCAAGCCAGCTGTAGAGGTCC
CGTTCCCCGGATCCATAGCAGGCGCTACGTCGTTATTTACTCCCGTATCC
AGTAACCGACTTGCACGGTTCATGATATTTGCATCCTTACATCCAGAGAC
GTGCGGGGGTGGTCGGCTGTTCAATGTCGCTGACCAGCCGACACCTTGTA
CGTACGGATCACTGTGGCCTCGGCTGGCAGAATGGTTTGGTCTCGTGGGC
GTGCCGCCTGTTGACCCTGCTCCAGAAGGCGAGCATAATAAGCTAAAAGT
TGGGGAAGTCCCTGAGCGGGCTTCAACGCTCGCGCCTGGAGAGTATATAA
CTAAATATCGGGAAATCTTTACCCGTTATGGATGTCCGAAAGCTGTTACT
GGCGGGGTCGGAGTGGGGTATCGTCAGTTGGATAGTGTCGGGTATTGGTT
AACTTTTGATCGGCAGTTGAGTCTGGAAAAGCTTCAGGAGACTGGCTTTG
AGGGGAATCAGGATCCGGTAGAGGGCTGGTTGGAGAGTTTTGCGATGTTT
CGCAGGGCGGGGTTGATTCTGTGAGGATACGGCATCTATTCCCCCGGCGG
GACATTCATCCCACCGCTACACGAAGAATTGGTTAACAACCTCCCTCCAG
ACTACGCCAAGACTGTCGTTTATCCCGCATATCGCGAGATACTCAGTACA
TCCAGCCAGGGAAGGAATTGGACTTGGTGTGAAGTGTGTCCGGATGCAAT
TTCTTCACCGCTATGGACGACGACCTGGAAGAAGTCGCTACCAACCGACG
GATGCTGCAGAATGTCATTGATGCTCATAACCTAATCAGTCCCAAATTAC
AGTTCGTCTCCTTTGTGGGTGGGACACGGATGCCACCAAACACTCCCGGC
CATGCGATTGTTTACGGCGCATCAGGTTTAATTGGCTGGGCGCTAATAAA
CCAGCTCTTAAGTCCGTACCCTGTCGCTGATACATTCAAAAAGGTCACAG
CTGTCACGAATAGACCACTCGATCTCTCTGAGACATACTGGCCAGAGGCA
GACTCTCACCGGCCCCGGCTGCAGTTGGCCTCGGGCGTTGATCTTCGCAG
CTGGGATCGGGATAGACTGGTGGAGTGGTTGAGGCAGGTTGTTGAGGATA
GTCAGGGCGTGACTCATGTCTATTACTTGGGTTGGTTTCACCCCCAATGG
ATCGCAATTCAGTCTGGCATTGCACTGGGCGCAATACTTATCCCTATATG
CCTACAATAATGGCATCGGACCACATACTCAGGGAAGCGCCAAGCCAGCT
GTAGAGGTCCCGTTCCCCGGATCCATAGCAGGCGCTACGTCGTTATTTAC
TCCCGTATCCAGTAACCGACTTGCACGGTTCATGATATTTGCATCCTTAC
ATCCAGAGACGTGCGGGGGTGGTCGGCTGTTCAATGTCGCTGACCAGCCG
ACACCTTGTACGTACGGATCACTGTGGCCTCGGCTGGCAGAATGGTTTGG
TCTCGTGGGCGTGCCGCCTGTTGACCCTGCTCCAGAAGGCGAGCATAATA
AGCTAAAAGTTGGGGAAGTCCCTGAGCGGGCTTCAACGCTCGCGCCTGGA
GAGTATATAACTAAATATCGGGAAATCTTTACCCGTTATGGATGTCCGAA
AGCTGTTACTGGCGGGGTCGGAGTGGGGTATCGTCAGTTGGATAGTGTCG
GGTATTGGTTAACTTTTGATCGGCAGTTGAGTCTGGAAAAGCTTCAGGAG
ACTGGCTTTGAGGGGAATCAGGATCCGGTAGAGGGCTGGTTGGAGAGTTT
TGCGATGTTTCGCAGGGCGGGGTTGATTCTGTGAGGATACGGCATCTATT
CCCCCGGCGGGACATTCATCCCACCGCTACACGAAGAATTGGTTAACAAC
CTCCCTCCAGACTACGCCAAGACTGTCGTTTATCCCGCATATCGCGAGAT
ACTCAGTACATCCAGCCAGGGAAGGAATTGGACTTGGTGTGAAGTGTGTC
CGGATGCAATTTCTTCACCGCTATGGACGACGACCTGGAAGAAGTCGCTA
CCAACCGACGGATGCTGCAGAATGTCATTGATGCTCATAACCTAATCAGT
CCCAAATTACAGTTCGTCTCCTTTGTGGGTGGGACACGGATGCCACCAAA
CACTCCCGGCCATGCGATTGTTTACGGCGCATCAGGTTTAATTGGCTGGG
CGCTAATAAACCAGCTCTTAAGTCCGTACCCTGTCGCTGATACATTCAAA
AAGGTCACAGCTGTCACGAATAGACCACTCGATCTCTCTGAGACATACTG
GCCAGAGGCAGACTCTCACCGGCCCCGGCTGCAGTTGGCCTCGGGCGTTG
ATCTTCGCAGCTGGGATCGGGATAGACTGGTGGAGTGGTTGAGGCAGGTT
GTTGAGGATAGTCAGGGCGTGACTCATGTCTATTACTTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012605-T1.utr3p1 | KJC3_012605-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012605-T1.utr5p1 | KJC3_012605-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4048227..4050028 - |
|
