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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4090691..4093044+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012620-T1 ID=KJC3_012620-T1|Name=KJC3_012620-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2354bp|location=Sequence derived from alignment at ch8:4090691..4093044+ (Aspergillus niger KJC3)
AAATAATCCACGTGATCCCGTGTCCAATAATACCCAAAACGGTTAAGCGT
CTGGAGCGCTCCAGACCGAGGAACAAGAGATGAGGCAAATCACCAGCAAC
CAAGGAAAAGCTTTTAGCGATCCCCTGAAATAATGCCTATATAAATCTAT
CAACATCACTAACCGGTCGAATATCTGCAGCATCACTGTCACTAACACAG
ACAACTTTCTCAGCACCAGTCCTACAGCCAGCCAGCCAGCCAGCCAGCTA
GCAAACAGCATGCCCCTAGTCGAAGACAGTCCTCGCGAGGACATCGACGC
GATCCAAATACCCTCTACAACCCCCAGTCACGACAATGAAGCTCATAATG
AAGAACACTACGACGATAACGACGTCCCCGTCAACAGAAAAACCAGCTTT
GGTGGTCGTCTTAATCAATACTTCCACACAGCAAAACCCACATCATCAGC
GCCACCAGCACTCCCATCCACGAAACAAATCACTACCAGCACTTCCTCTC
CTCTCAAACGCAAACGAACCACACCACCAACAGCACTCATAACACGGATA
ACCCGCTCGCGCTCCCGCTCCTCCACCTCAACCCCAACCAGCACCACCAC
GACTACCTCCTCCCCACGCCCACGCAAAACCCCCACACCCACACCCCCCA
CCTCCTCAGCAGCAGACTCCCTCCTCGTCGACACCATCCCACCCAACCTA
ACCCTCCTCCTCGTGGGTGTAAACCCGGGGGTTCTAACGGGCGTAACAGG
CTACGCCTACGCACACCCGAGCAACCTCTTCTGGAAGCTCCTGCACTGGT
CCGGGATCACACCCATCCGCCACCCACCCTCCGATACATACAAACTTCCC
GAACTATATAACATCGGCAACACGAATATTGTGGAGCGTCCGACGCGGGA
CGCGAGTATGCTCAGCAAGAAGGAGATGGATGCAGGAGTACCGGTTCTGG
AAGAGAAGGTGAGGGAGAAAAGACCGGAAGTGGTGTGTCTTGTGGGCAAG
AGTATCTGGGAGGCGGTTTGGAGGGTTAAGGTTGGACGGGGGATTAGGAA
GGAAGAGTTTAGGTATGGGTGGCAGGATTTGGAGATGAATATGGGGAGAG
TGGGTGGTGAAGGCGGGTGGGAGGGGGCCAGGGTGTTTGTGGCTACGACT
ACTAGTGGGTTGGCGGCGGGGATGTCGTTGCAGGAGAAGAGGGAGGTTTG
GGATGAGTTGGGGAGGTGGGTTTGTGAGAGGAGGAAAGTATGGGAGAGGG
AAAGGGAGAAGGTGGAAGTTGGTGGTGATGATACTAAAGTAGAATAGATA
TAGAAGCTTTCCGCTACGGTAATAGAATATAGATTTAACCATATATGTTT
CATTCATTTCATTTATCAATTACCCTCTTTTCCTAGGGAGATAGCTAGGA
AAGGTAAAGTTACACTGCATCATGTTCATCCGCTAGTAAAAGCATAATCA
TGTGCTCGATCAGTCGATATCATGCTACTATCAATCCTTGCCCCTCTGCA
CATCACGCCACCCATCAAGGGATCAAGGGGGGAACGGCCAGCCAGCCAGC
CAGCAAGGGCGTAATAACATGCACGAATCTATCGGAAAGCAGGTCCATTA
CGGAAGTTGGTATCACCTTGTTGTTCGCGAGCCTAGTATCACAGATCAGT
CAGCATTATTCCTCATGAACGGTCAAGGGAAGCAAAGCAAAGCAACATAC
AATAGTAGACTGGTACTCGCCGCGCTCCAAGATCTGGGTTATAACGTCGT
CTTCATTGGCAGTTCCGAATTCATTCTCGAGACTAGCCTTGCTAGCTCCG
TCAAGGACGCCTTGGGCTCCGTGCCTAGAAGTGAGTGCTGGTTAGTTCTG
CTTTCACTGCTGAGGGCATAAAGACGACAAGGACTTACTTGTGAGTAACA
AAGATCTTCCAGCCGTTAAGAACATCCGCCAGAGGGACTGAGCGGTCACC
ACGCCATCTGTTCAGGGCGTCGTGGTCATCGACGAAGACGATGAAGTCGT
CGGATGCTCCCTTGTAGAACATCTTGGAGGTGGGGTCGTTGTGGCGAGGC
ATCTTGGTAGTATGTAGTGGTTTGTAGTTGTTTTGAGACAAAGGTGGAAG
AACGATCTAGTTTCTTTCAATGAAGCTGCTAGAGACGATGATCTGTCGAA
TGACTAGGAGGATGGAGAAGAGGGAAAGTTGAGATGAAGTGAGTTGAAGA
GTGTCGTGAGAGGTGAGGGCAGATGACGTCACCACGATGCTACCGGAAGA
CAAAGGCGGGCAAACAGTGGCAGGAAGAGCAATTGAAGTGAGGAAAGTTG
TGCAAAGGGTATTTCAATAGCTAGTAGAGAGTTCGTTTGATAATTGAGTT
GATG back to topCoding sequence (CDS) from alignment at ch8:4090691..4093044+ >KJC3_012620-T1 ID=KJC3_012620-T1|Name=KJC3_012620-T1|organism=Aspergillus niger KJC3|type=CDS|length=1038bp|location=Sequence derived from alignment at ch8:4090691..4093044+ (Aspergillus niger KJC3)
ATGCCCCTAGTCGAAGACAGTCCTCGCGAGGACATCGACGCGATCCAAAT
ACCCTCTACAACCCCCAGTCACGACAATGAAGCTCATAATGAAGAACACT
ACGACGATAACGACGTCCCCGTCAACAGAAAAACCAGCTTTGGTGGTCGT
CTTAATCAATACTTCCACACAGCAAAACCCACATCATCAGCGCCACCAGC
ACTCCCATCCACGAAACAAATCACTACCAGCACTTCCTCTCCTCTCAAAC
GCAAACGAACCACACCACCAACAGCACTCATAACACGGATAACCCGCTCG
CGCTCCCGCTCCTCCACCTCAACCCCAACCAGCACCACCACGACTACCTC
CTCCCCACGCCCACGCAAAACCCCCACACCCACACCCCCCACCTCCTCAG
CAGCAGACTCCCTCCTCGTCGACACCATCCCACCCAACCTAACCCTCCTC
CTCGTGGGTGTAAACCCGGGGGTTCTAACGGGCGTAACAGGCTACGCCTA
CGCACACCCGAGCAACCTCTTCTGGAAGCTCCTGCACTGGTCCGGGATCA
CACCCATCCGCCACCCACCCTCCGATACATACAAACTTCCCGAACTATAT
AACATCGGCAACACGAATATTGTGGAGCGTCCGACGCGGGACGCGAGTAT
GCTCAGCAAGAAGGAGATGGATGCAGGAGTACCGGTTCTGGAAGAGAAGG
TGAGGGAGAAAAGACCGGAAGTGGTGTGTCTTGTGGGCAAGAGTATCTGG
GAGGCGGTTTGGAGGGTTAAGGTTGGACGGGGGATTAGGAAGGAAGAGTT
TAGGTATGGGTGGCAGGATTTGGAGATGAATATGGGGAGAGTGGGTGGTG
AAGGCGGGTGGGAGGGGGCCAGGGTGTTTGTGGCTACGACTACTAGTGGG
TTGGCGGCGGGGATGTCGTTGCAGGAGAAGAGGGAGGTTTGGGATGAGTT
GGGGAGGTGGGTTTGTGAGAGGAGGAAAGTATGGGAGAGGGAAAGGGAGA
AGGTGGAAGTTGGTGGTGATGATACTAAAGTAGAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0019104 | DNA N-glycosylase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012620-T1.utr5p1 | KJC3_012620-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015637 |
| DBxref | InterPro:IPR036895 |
| DBxref | InterPro:IPR005122 |
| DBxref | PFAM:PF03167 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4090691..4093044 + |
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