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KJC3_012621-T1, KJC3_012621-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012621-T1
Unique NameKJC3_012621-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4092269..4092742-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012621-T1 ID=KJC3_012621-T1|Name=KJC3_012621-T1|organism=Aspergillus niger KJC3|type=mRNA|length=474bp|location=Sequence derived from alignment at ch8:4092269..4092742- (Aspergillus niger KJC3)
ATGCCTCGCCACAACGACCCCACCTCCAAGATGTTCTACAAGGGAGCATC
CGACGACTTCATCGTCTTCGTCGATGACCACGACGCCCTGAACAGATGGC
GTGGTGACCGCTCAGTCCCTCTGGCGGATGTTCTTAACGGCTGGAAGATC
TTTGTTACTCACAAGTAAGTCCTTGTCGTCTTTATGCCCTCAGCAGTGAA
AGCAGAACTAACCAGCACTCACTTCTAGGCACGGAGCCCAAGGCGTCCTT
GACGGAGCTAGCAAGGCTAGTCTCGAGAATGAATTCGGAACTGCCAATGA
AGACGACGTTATAACCCAGATCTTGGAGCGCGGCGAGTACCAGTCTACTA
TTGTATGTTGCTTTGCTTTGCTTCCCTTGACCGTTCATGAGGAATAATGC
TGACTGATCTGTGATACTAGGCTCGCGAACAACAAGGTGATACCAACTTC
CGTAATGGACCTGCTTTCCGATAG
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Coding sequence (CDS) from alignment at ch8:4092269..4092742-

>KJC3_012621-T1 ID=KJC3_012621-T1|Name=KJC3_012621-T1|organism=Aspergillus niger KJC3|type=CDS|length=1026bp|location=Sequence derived from alignment at ch8:4092269..4092742- (Aspergillus niger KJC3)
GCTCGCGAACAACAAGGTGATACCAACTTCCGTAATGGACCTGCTTTCCG
ATAGGCACGGAGCCCAAGGCGTCCTTGACGGAGCTAGCAAGGCTAGTCTC
GAGAATGAATTCGGAACTGCCAATGAAGACGACGTTATAACCCAGATCTT
GGAGCGCGGCGAGTACCAGTCTACTATTATGCCTCGCCACAACGACCCCA
CCTCCAAGATGTTCTACAAGGGAGCATCCGACGACTTCATCGTCTTCGTC
GATGACCACGACGCCCTGAACAGATGGCGTGGTGACCGCTCAGTCCCTCT
GGCGGATGTTCTTAACGGCTGGAAGATCTTTGTTACTCACAAGCTCGCGA
ACAACAAGGTGATACCAACTTCCGTAATGGACCTGCTTTCCGATAGGCAC
GGAGCCCAAGGCGTCCTTGACGGAGCTAGCAAGGCTAGTCTCGAGAATGA
ATTCGGAACTGCCAATGAAGACGACGTTATAACCCAGATCTTGGAGCGCG
GCGAGTACCAGTCTACTATTATGCCTCGCCACAACGACCCCACCTCCAAG
ATGTTCTACAAGGGAGCATCCGACGACTTCATCGTCTTCGTCGATGACCA
CGACGCCCTGAACAGATGGCGTGGTGACCGCTCAGTCCCTCTGGCGGATG
TTCTTAACGGCTGGAAGATCTTTGTTACTCACAAGCTCGCGAACAACAAG
GTGATACCAACTTCCGTAATGGACCTGCTTTCCGATAGGCACGGAGCCCA
AGGCGTCCTTGACGGAGCTAGCAAGGCTAGTCTCGAGAATGAATTCGGAA
CTGCCAATGAAGACGACGTTATAACCCAGATCTTGGAGCGCGGCGAGTAC
CAGTCTACTATTATGCCTCGCCACAACGACCCCACCTCCAAGATGTTCTA
CAAGGGAGCATCCGACGACTTCATCGTCTTCGTCGATGACCACGACGCCC
TGAACAGATGGCGTGGTGACCGCTCAGTCCCTCTGGCGGATGTTCTTAAC
GGCTGGAAGATCTTTGTTACTCACAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012621KJC3_012621Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012621-T1KJC3_012621-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012621-T1.cdsKJC3_012621-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012621-T1.exon3KJC3_012621-T1.exon3Aspergillus niger KJC3exon
KJC3_012621-T1.exon2KJC3_012621-T1.exon2Aspergillus niger KJC3exon
KJC3_012621-T1.exon1KJC3_012621-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR019783
DBxrefInterPro:IPR036786
DBxrefPFAM:PF01172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4092269..4092742 -
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