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KJC3_012623-T1, KJC3_012623-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012623-T1
Unique NameKJC3_012623-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4096838..4098262+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012623-T1 ID=KJC3_012623-T1|Name=KJC3_012623-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1425bp|location=Sequence derived from alignment at ch8:4096838..4098262+ (Aspergillus niger KJC3)
GGCAACTTATTTACAATAACGTAGTATCAACTGTATTAAATGGGGAGAAA
TGGATGATGGTGTTGCGCAGTTCTCTTCATAGCGCGCGATGCCAAGAAGG
TGAAACTCCCCCAGATTTCCCACCGAAAGACCCACCGCCGTTTTCCGGGA
TCGGTCTGCGACAGCTCTCGCCGCTCCCGATCCTTCATCTTTCATCCAAC
CAACGATGTTCTAAACCACCTCTCACTCATTCTAGTATGGGAATACCCAT
GGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAG
GGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGCAA
GAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCTTCCTTGG
CTCGGTGAGTTGAACTGATATTGGATAAGCCTTGCCACTCTGTGAGATGT
CGACTGACGATGCTTTCTGTCTAGCATGGCGTTAATATGAACACATCTCT
CACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAAGTG
AGTCACTACTTTTTGCCTCCGCAGTGCGTCTGCTAAACAGTAGTTAGTAC
GCACCACTCGAGCCCGGATTATTCGACTGCGGAATGACCATAAAGACGTG
ATGTCACATCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAGCG
GGCGCAAACTGCCGCACAGTCGGGTGGCTTGGGGTCGCAACCTAGTGTGA
CTGGGAATAATACCTCCGGCACTGGGGCATCTGGGTTACCCTTCGCAAAG
GTCAATAGTGTGGTGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGGGT
TGGAGATACCGTTCGGGAGTTCGGAAGTGCCAGCTGGCTCAACCATGAAC
GTCTCTCCAGGGTGGCGGAGATAGTGCAGCAGAGTGAAGGGGTAAGTAGG
CGATGTGCTTCCAACCTCTTAGTCGTCTAGTCCAGGGACATGCACTCGGG
AGAACGCTCTAGGCTAACGTCTTCTAGCGCACTGTGGCGGTCAAAGTCGT
GAGGAAAGATCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCTTG
TCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCGTG
CCGCTGTAGTGGACTGGCATCGGGTTAGGCACGAGGATGACGGCCGTTTA
CTGTACTCTGGGATAGTCCCTAGAATACTAGGACTTAGCCGGGTACGATC
TACTTTCGTTTATGATTTCTCCCTTTTGCTTGCTATTGGACTTTATGAGG
AATGTGACATGTATTCATGATCGAACGCGACGTGTTTATTCTTGCAGGGA
AATACCTAGGGAAGCATTCAGGGTGGCGTTTCAGTTTAGGTTCAAGAGAT
GAAATTGCACCTGTTTATATGGACA
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Coding sequence (CDS) from alignment at ch8:4096838..4098262+

>KJC3_012623-T1 ID=KJC3_012623-T1|Name=KJC3_012623-T1|organism=Aspergillus niger KJC3|type=CDS|length=3600bp|location=Sequence derived from alignment at ch8:4096838..4098262+ (Aspergillus niger KJC3)
ATGATGGTGTTGCGCAGTTCTCTTCATAGCGCGCGATGCCAAGAAGGTGA
AACTCCCCCAGATTTCCCACCGAAAGACCCACCGCCGTTTTCCGGGATCG
GTCTGCGACAGCTCTCGCCGCTCCCGATCCTTCATCTTTCATCCAACCAA
CGATGTTCTAAACCACCTCTCACTCATTCTAGTATGGGAATACCCATGGG
TTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAGGGG
CTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGCAAGAA
AAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCTTCCTTGGCTC
GCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTTCCCAC
GAGACGATATCGATGTTGCCCAAATACGCACCACTCGAGCCCGGATTATT
CGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGAGAAAGGAAT
TCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACAGTCGG
GTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAATAATACCTCCGGCACT
GGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAG
TCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCG
GAAGTGCCAGCTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAGATA
GTGCAGCAGAGTGAAGGGCGCACTGTGGCGGTCAAAGTCGTGAGGAAAGA
TCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCTTGTCCCTCGCC
GTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCGTGCCGCTGTAG
ATGATGGTGTTGCGCAGTTCTCTTCATAGCGCGCGATGCCAAGAAGGTGA
AACTCCCCCAGATTTCCCACCGAAAGACCCACCGCCGTTTTCCGGGATCG
GTCTGCGACAGCTCTCGCCGCTCCCGATCCTTCATCTTTCATCCAACCAA
CGATGTTCTAAACCACCTCTCACTCATTCTAGTATGGGAATACCCATGGG
TTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAGGGG
CTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGCAAGAA
AAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCTTCCTTGGCTC
GCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTTCCCAC
GAGACGATATCGATGTTGCCCAAATACGCACCACTCGAGCCCGGATTATT
CGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGAGAAAGGAAT
TCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACAGTCGG
GTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAATAATACCTCCGGCACT
GGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAG
TCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCG
GAAGTGCCAGCTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAGATA
GTGCAGCAGAGTGAAGGGCGCACTGTGGCGGTCAAAGTCGTGAGGAAAGA
TCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCTTGTCCCTCGCC
GTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCGTGCCGCTGTAG
ATGATGGTGTTGCGCAGTTCTCTTCATAGCGCGCGATGCCAAGAAGGTGA
AACTCCCCCAGATTTCCCACCGAAAGACCCACCGCCGTTTTCCGGGATCG
GTCTGCGACAGCTCTCGCCGCTCCCGATCCTTCATCTTTCATCCAACCAA
CGATGTTCTAAACCACCTCTCACTCATTCTAGTATGGGAATACCCATGGG
TTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAGGGG
CTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGCAAGAA
AAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCTTCCTTGGCTC
GCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTTCCCAC
GAGACGATATCGATGTTGCCCAAATACGCACCACTCGAGCCCGGATTATT
CGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGAGAAAGGAAT
TCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACAGTCGG
GTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAATAATACCTCCGGCACT
GGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAG
TCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCG
GAAGTGCCAGCTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAGATA
GTGCAGCAGAGTGAAGGGCGCACTGTGGCGGTCAAAGTCGTGAGGAAAGA
TCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCTTGTCCCTCGCC
GTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCGTGCCGCTGTAG
ATGATGGTGTTGCGCAGTTCTCTTCATAGCGCGCGATGCCAAGAAGGTGA
AACTCCCCCAGATTTCCCACCGAAAGACCCACCGCCGTTTTCCGGGATCG
GTCTGCGACAGCTCTCGCCGCTCCCGATCCTTCATCTTTCATCCAACCAA
CGATGTTCTAAACCACCTCTCACTCATTCTAGTATGGGAATACCCATGGG
TTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAGGGG
CTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGCAAGAA
AAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCTTCCTTGGCTC
GCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTTCCCAC
GAGACGATATCGATGTTGCCCAAATACGCACCACTCGAGCCCGGATTATT
CGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGAGAAAGGAAT
TCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACAGTCGG
GTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAATAATACCTCCGGCACT
GGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAG
TCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCG
GAAGTGCCAGCTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAGATA
GTGCAGCAGAGTGAAGGGCGCACTGTGGCGGTCAAAGTCGTGAGGAAAGA
TCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCTTGTCCCTCGCC
GTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCGTGCCGCTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012623KJC3_012623Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012623-T1KJC3_012623-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012623-T1.utr5p1KJC3_012623-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012623-T1.exon1KJC3_012623-T1.exon1Aspergillus niger KJC3exon
KJC3_012623-T1.exon2KJC3_012623-T1.exon2Aspergillus niger KJC3exon
KJC3_012623-T1.exon3KJC3_012623-T1.exon3Aspergillus niger KJC3exon
KJC3_012623-T1.exon4KJC3_012623-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012623-T1.cdsKJC3_012623-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012623-T1.utr3p1KJC3_012623-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR041489
DBxrefInterPro:IPR040815
DBxrefInterPro:IPR036034
DBxrefInterPro:IPR001478
DBxrefPFAM:PF17820
DBxrefPFAM:PF13180
DBxrefPFAM:PF00595
DBxrefPFAM:PF18265
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4096838..4098262 +
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