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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4265154..4266426+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012679-T1 ID=KJC3_012679-T1|Name=KJC3_012679-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1273bp|location=Sequence derived from alignment at ch8:4265154..4266426+ (Aspergillus niger KJC3)
ATGGAGAACCAACGGATCTCCGATTTCCTCGCCGACCAGCTGCAGCAAGC
TCCCGAGCAATGCCAGGCCTATTTCCTGAGCTTCGAAGATTACTGGGAAC
GCAAACTATGGCATCAGCTTACGGATTCCTTGATTGAGTTCTTCCGTCTA
CCAGAGAGTGCAGCTCAGCGACTACCGATATTCAAGAGTTTCGTCCTCAG
CTTCGCCGACAGAATCAATCAGCTCAAGTTCGTTTCGCTGGGGTTGATGG
CGTCAACAGAATGCTCAAGTTTGTATCCCAGCTATCGATCGCTAGAGCTT
TCGCAATACAAAGCTATCGCTAACACTACTGCAACAGATGACCAAGAACG
CCTCACCTTCCTCACATCGCTGGCAGACAAAGTGAACAAGCCCGAGTCAC
AAGATGCTTACATCTACGCCCTCGCGGATGTCGCCAACGTCAAGCAACGG
CTACAAGACCTGAACGGTGCGCAGAAGGACCTGGAGACATGCCAGAAAGT
GCTGGACACGTTCGACTCCGTGGAGACCGTGGTGCACGCCTCCTTCTACA
AAGTCAACGCGGACTACTACCACGTATGTACCCCCCGCACCTGCCACCTG
GGACTCACTAACCTTTCTCCCCCTTCTACAGACCAAACAAGAATTCGCCT
CCTTCTACAAGAATGCCCTCCTATACCTCGCCTGCATCAACCTCGAGGAT
CTCAGCGAAGCCGAGCGCGTCTCCCGCGCATACAACCTCAGTGTGGCCGC
GCTCGTCTCCGACACCATCTACAACTTTGGTGAACTACTCCTGCACCCGA
TCCTGGACTCCCTCACCGAGACGCCGCACAGCTGGCTGCGCGAGCTCCTG
TTCGCCTTCAACCGCGGCGACCTGACCGCCTACGACGTCCTCGCCGGAAA
CATCTCCAAGAACCAGCTGCTTGAGCAGCACCGCATTTTCCTATACCAGA
AGATCTCCCTGTCCGCGCTGACGGAGATGGTTTTCCGCCGGCCCCCGCAC
GACCGCAACCTGACTTTCTCGGCCATCTCCGCCGAAACGAAGGTCAAGCC
CCAGGAGATCGAGCATCTGATCATGAAGGCCCTGTCGCTGGGTTTGCTCA
AGGGTGCCATTGATCAGGTGGCTCAGGTCGCCCAGATCAACTGGGTGCAG
CCGAAGGTGCTGGATATGAAGCAGATCGAGGGCATGCGGAACCGTCTGAG
GGATTGGGATGCTGGTGTCAACCAGCTGGGTCACTGGATTGAGGGCGTTG
GAAAGGATGTGTGGGCTGCATAA back to topCoding sequence (CDS) from alignment at ch8:4265154..4266426+ >KJC3_012679-T1 ID=KJC3_012679-T1|Name=KJC3_012679-T1|organism=Aspergillus niger KJC3|type=CDS|length=3438bp|location=Sequence derived from alignment at ch8:4265154..4266426+ (Aspergillus niger KJC3)
ATGGAGAACCAACGGATCTCCGATTTCCTCGCCGACCAGCTGCAGCAAGC
TCCCGAGCAATGCCAGGCCTATTTCCTGAGCTTCGAAGATTACTGGGAAC
GCAAACTATGGCATCAGCTTACGGATTCCTTGATTGAGTTCTTCCGTCTA
CCAGAGAGTGCAGCTCAGCGACTACCGATATTCAAGAGTTTCGTCCTCAG
CTTCGCCGACAGAATCAATCAGCTCAAGTTCGTTTCGCTGGGGTTGATGG
CGTCAACAGAATGCTCAAATGACCAAGAACGCCTCACCTTCCTCACATCG
CTGGCAGACAAAGTGAACAAGCCCGAGTCACAAGATGCTTACATCTACGC
CCTCGCGGATGTCGCCAACGTCAAGCAACGGCTACAAGACCTGAACGGTG
CGCAGAAGGACCTGGAGACATGCCAGAAAGTGCTGGACACGTTCGACTCC
GTGGAGACCGTGGTGCACGCCTCCTTCTACAAAGTCAACGCGGACTACTA
CCACACCAAACAAGAATTCGCCTCCTTCTACAAGAATGCCCTCCTATACC
TCGCCTGCATCAACCTCGAGGATCTCAGCGAAGCCGAGCGCGTCTCCCGC
GCATACAACCTCAGTGTGGCCGCGCTCGTCTCCGACACCATCTACAACTT
TGGTGAACTACTCCTGCACCCGATCCTGGACTCCCTCACCGAGACGCCGC
ACAGCTGGCTGCGCGAGCTCCTGTTCGCCTTCAACCGCGGCGACCTGACC
GCCTACGACGTCCTCGCCGGAAACATCTCCAAGAACCAGCTGCTTGAGCA
GCACCGCATTTTCCTATACCAGAAGATCTCCCTGTCCGCGCTGACGGAGA
TGGTTTTCCGCCGGCCCCCGCACGACCGCAACCTGACTTTCTCGGCCATC
TCCGCCGAAACGAAGGTCAAGCCCCAGGAGATCGAGCATCTGATCATGAA
GGCCCTGTCGCTGGGTTTGCTCAAGGGTGCCATTGATCAGGTGGCTCAGG
TCGCCCAGATCAACTGGGTGCAGCCGAAGGTGCTGGATATGAAGCAGATC
GAGGGCATGCGGAACCGTCTGAGGGATTGGGATGCTGGTGTCAACCAGCT
GGGTCACTGGATTGAGGGCGTTGGAAAGGATGTGTGGGCTGCATAAATGG
AGAACCAACGGATCTCCGATTTCCTCGCCGACCAGCTGCAGCAAGCTCCC
GAGCAATGCCAGGCCTATTTCCTGAGCTTCGAAGATTACTGGGAACGCAA
ACTATGGCATCAGCTTACGGATTCCTTGATTGAGTTCTTCCGTCTACCAG
AGAGTGCAGCTCAGCGACTACCGATATTCAAGAGTTTCGTCCTCAGCTTC
GCCGACAGAATCAATCAGCTCAAGTTCGTTTCGCTGGGGTTGATGGCGTC
AACAGAATGCTCAAATGACCAAGAACGCCTCACCTTCCTCACATCGCTGG
CAGACAAAGTGAACAAGCCCGAGTCACAAGATGCTTACATCTACGCCCTC
GCGGATGTCGCCAACGTCAAGCAACGGCTACAAGACCTGAACGGTGCGCA
GAAGGACCTGGAGACATGCCAGAAAGTGCTGGACACGTTCGACTCCGTGG
AGACCGTGGTGCACGCCTCCTTCTACAAAGTCAACGCGGACTACTACCAC
ACCAAACAAGAATTCGCCTCCTTCTACAAGAATGCCCTCCTATACCTCGC
CTGCATCAACCTCGAGGATCTCAGCGAAGCCGAGCGCGTCTCCCGCGCAT
ACAACCTCAGTGTGGCCGCGCTCGTCTCCGACACCATCTACAACTTTGGT
GAACTACTCCTGCACCCGATCCTGGACTCCCTCACCGAGACGCCGCACAG
CTGGCTGCGCGAGCTCCTGTTCGCCTTCAACCGCGGCGACCTGACCGCCT
ACGACGTCCTCGCCGGAAACATCTCCAAGAACCAGCTGCTTGAGCAGCAC
CGCATTTTCCTATACCAGAAGATCTCCCTGTCCGCGCTGACGGAGATGGT
TTTCCGCCGGCCCCCGCACGACCGCAACCTGACTTTCTCGGCCATCTCCG
CCGAAACGAAGGTCAAGCCCCAGGAGATCGAGCATCTGATCATGAAGGCC
CTGTCGCTGGGTTTGCTCAAGGGTGCCATTGATCAGGTGGCTCAGGTCGC
CCAGATCAACTGGGTGCAGCCGAAGGTGCTGGATATGAAGCAGATCGAGG
GCATGCGGAACCGTCTGAGGGATTGGGATGCTGGTGTCAACCAGCTGGGT
CACTGGATTGAGGGCGTTGGAAAGGATGTGTGGGCTGCATAAATGGAGAA
CCAACGGATCTCCGATTTCCTCGCCGACCAGCTGCAGCAAGCTCCCGAGC
AATGCCAGGCCTATTTCCTGAGCTTCGAAGATTACTGGGAACGCAAACTA
TGGCATCAGCTTACGGATTCCTTGATTGAGTTCTTCCGTCTACCAGAGAG
TGCAGCTCAGCGACTACCGATATTCAAGAGTTTCGTCCTCAGCTTCGCCG
ACAGAATCAATCAGCTCAAGTTCGTTTCGCTGGGGTTGATGGCGTCAACA
GAATGCTCAAATGACCAAGAACGCCTCACCTTCCTCACATCGCTGGCAGA
CAAAGTGAACAAGCCCGAGTCACAAGATGCTTACATCTACGCCCTCGCGG
ATGTCGCCAACGTCAAGCAACGGCTACAAGACCTGAACGGTGCGCAGAAG
GACCTGGAGACATGCCAGAAAGTGCTGGACACGTTCGACTCCGTGGAGAC
CGTGGTGCACGCCTCCTTCTACAAAGTCAACGCGGACTACTACCACACCA
AACAAGAATTCGCCTCCTTCTACAAGAATGCCCTCCTATACCTCGCCTGC
ATCAACCTCGAGGATCTCAGCGAAGCCGAGCGCGTCTCCCGCGCATACAA
CCTCAGTGTGGCCGCGCTCGTCTCCGACACCATCTACAACTTTGGTGAAC
TACTCCTGCACCCGATCCTGGACTCCCTCACCGAGACGCCGCACAGCTGG
CTGCGCGAGCTCCTGTTCGCCTTCAACCGCGGCGACCTGACCGCCTACGA
CGTCCTCGCCGGAAACATCTCCAAGAACCAGCTGCTTGAGCAGCACCGCA
TTTTCCTATACCAGAAGATCTCCCTGTCCGCGCTGACGGAGATGGTTTTC
CGCCGGCCCCCGCACGACCGCAACCTGACTTTCTCGGCCATCTCCGCCGA
AACGAAGGTCAAGCCCCAGGAGATCGAGCATCTGATCATGAAGGCCCTGT
CGCTGGGTTTGCTCAAGGGTGCCATTGATCAGGTGGCTCAGGTCGCCCAG
ATCAACTGGGTGCAGCCGAAGGTGCTGGATATGAAGCAGATCGAGGGCAT
GCGGAACCGTCTGAGGGATTGGGATGCTGGTGTCAACCAGCTGGGTCACT
GGATTGAGGGCGTTGGAAAGGATGTGTGGGCTGCATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR000717 |
| DBxref | PFAM:PF01399 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4265154..4266426 + |
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