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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4296355..4297657+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012689-T1 ID=KJC3_012689-T1|Name=KJC3_012689-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1303bp|location=Sequence derived from alignment at ch8:4296355..4297657+ (Aspergillus niger KJC3)
CAATCCAGAGGTGGTTTCCCTGTTAGTCATCAATGGCCTTATCGGGAACT
CCTCCGCATCCTGAATGAAGTCAACTGCGCCTCACCTCTGCAATCGAGTC
AAGCATCGTCTCCACCTTCAACCAGCGTCAATAACCTGAGCGCTCCGACC
AGTCGATACATTACGCACGGCTATTCTGGCATTATCTGCGATACTAGCAA
TCACCATGGCGTCCCAGAACGTCAACATTCTCCTGTCGACCTTTCCCGGT
CTCTCACTCCCCTCAACGCTCTCCTTCGCGCTCCCATTATCATCGAGCGT
CGCTGACCTGACCGACAAAATCGCCTCATACCTGCCTCCTTCTCTGCCAC
TCAATCGTCTGATCTTGACAACAACCAGCAATAAGCAACTTCTTCCCTCA
TCCGAAACCCTCGCATCCTACCTCATCAGCAGCAATGATAACCTCGCCAC
AACCTCCATCCTCCCCCTCCGCCTCAGCACCCCCCTATGCGGTGGTAAGG
GAGGTTTCGGATCCCAGCTCCGCGCCGCCGGTGGGCGCATGTCCAGCAAG
CGCAAGCGCAACCAGGGCGACGACAATGGATCTAGCCGCAATCTCGATGG
CCGTCGTCTACGCACAGTCAACGAAGCCAAGGCATTGGCCGAGTACCTCG
CCCTTAAGCCGGAGATGGACAAGAAGGAGAAGGAGGAGCGCCGGCGCCGG
TGGCAGGCTGTTGTTGAGGCGGCGGAGAAGCGTCAGGAGGAGCTGAAGAA
CGGAGGTGGCAAGCAGAAGATTGATGGTCAGTGGATGGAGGACAAGGACG
AGATGAATGAGAAGGCGAGAGAGGCGGTTCTTATGGCCATGAAGGACGGT
ATGTGGACGGATAACTTGCGCGATACGATTCTGGGCGGATCAAGTACGAG
TGCCAGTCCGAGCGAGGGAAGTGGACAGGAGACATCCTCTAGCTCTGAGG
AGGAAAGTGATGATGAGCAGGAGATGGAAGATGCGCCTGGACCCTCGTCG
GAACCGGCGCGCAGTGCGGCACCTCGGCGGTATATTGGATTTGATGAGGA
TGATGAGTTCATGAGTGATTCTGAAGAAGAGGAGGAGGAGGCTGAAGATC
CTAAGGGGAAGGGAAAAGCGAAGGCTTGATTGAATGCCATTGAATGTTTC
TTTTCATGCGATTATGGAGTATGGTCTACGGTTCTGGTTGTTTTTCATGT
TGTTGGCTCGTTATTGATATCAGGGTTTGCGAAGCACGGTTATTACATTT
CAAGCTTTTATAAGCTAGCGTGCAGATTCCATTAAAAATAATATTTTCAC
TAC back to topCoding sequence (CDS) from alignment at ch8:4296355..4297657+ >KJC3_012689-T1 ID=KJC3_012689-T1|Name=KJC3_012689-T1|organism=Aspergillus niger KJC3|type=CDS|length=924bp|location=Sequence derived from alignment at ch8:4296355..4297657+ (Aspergillus niger KJC3)
ATGGCGTCCCAGAACGTCAACATTCTCCTGTCGACCTTTCCCGGTCTCTC
ACTCCCCTCAACGCTCTCCTTCGCGCTCCCATTATCATCGAGCGTCGCTG
ACCTGACCGACAAAATCGCCTCATACCTGCCTCCTTCTCTGCCACTCAAT
CGTCTGATCTTGACAACAACCAGCAATAAGCAACTTCTTCCCTCATCCGA
AACCCTCGCATCCTACCTCATCAGCAGCAATGATAACCTCGCCACAACCT
CCATCCTCCCCCTCCGCCTCAGCACCCCCCTATGCGGTGGTAAGGGAGGT
TTCGGATCCCAGCTCCGCGCCGCCGGTGGGCGCATGTCCAGCAAGCGCAA
GCGCAACCAGGGCGACGACAATGGATCTAGCCGCAATCTCGATGGCCGTC
GTCTACGCACAGTCAACGAAGCCAAGGCATTGGCCGAGTACCTCGCCCTT
AAGCCGGAGATGGACAAGAAGGAGAAGGAGGAGCGCCGGCGCCGGTGGCA
GGCTGTTGTTGAGGCGGCGGAGAAGCGTCAGGAGGAGCTGAAGAACGGAG
GTGGCAAGCAGAAGATTGATGGTCAGTGGATGGAGGACAAGGACGAGATG
AATGAGAAGGCGAGAGAGGCGGTTCTTATGGCCATGAAGGACGGTATGTG
GACGGATAACTTGCGCGATACGATTCTGGGCGGATCAAGTACGAGTGCCA
GTCCGAGCGAGGGAAGTGGACAGGAGACATCCTCTAGCTCTGAGGAGGAA
AGTGATGATGAGCAGGAGATGGAAGATGCGCCTGGACCCTCGTCGGAACC
GGCGCGCAGTGCGGCACCTCGGCGGTATATTGGATTTGATGAGGATGATG
AGTTCATGAGTGATTCTGAAGAAGAGGAGGAGGAGGCTGAAGATCCTAAG
GGGAAGGGAAAAGCGAAGGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012689-T1.utr5p1 | KJC3_012689-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012689-T1.utr3p1 | KJC3_012689-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024974 |
| DBxref | PFAM:PF13019 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4296355..4297657 + |
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