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KJC3_012708-T1, KJC3_012708-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012708-T1
Unique NameKJC3_012708-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4348720..4351060-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012708-T1 ID=KJC3_012708-T1|Name=KJC3_012708-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2341bp|location=Sequence derived from alignment at ch8:4348720..4351060- (Aspergillus niger KJC3)
CTCGCAGCGACCACCCGGCCAGATAGCTCAACTAGGCCAACAGTACAGTC CCACGATGGCGAGCTACTTCCCTCCAAACGGAGTCATCTCCAGCCATGGC TCTACTCGAGCATCTTCACCAGCTTCCTCTCCGCTTTCACCCCCGGTACA CCAGCGATCCAATGCCTTGTCCAACCGACTGACAAGTGTACTTTCGGCCT CCTATGCGGACTCGGACATTCGCGATGCGCTGGAGACACTCAGCCTCAGG GGGATACACAATACGGCAGAAGTTCGGAGACAGTTGCGCTTGGATGTTCA GAAGGAAGTCGTCGATAGCAATGCCGAGATCGTGCGGGATTTCGGGCTCG TTGCGGAGGTAAGATGCGCCTATGCTGAGAGATCTAATGGTTGCTAACTT GGCTTGCTGTAGCAATTGAAACGGATAGGAACTGTAATTACGAACTTGAA TCAGACTTGCGATGAGATGCGCAAACATATCGTCTCGGCTAGACAGGAGA CAACGCCAGTGCTCGAGGAAGCGTCGGCTTTGATGAAGCAGAGAAAAGAG GCAGAGACCAAGCAGGAGCTGCTGGAAGCTTTCACCCAACACTTCATCGT CCCCGATGAGGACTTGCTGATCCTGACGCACGCCGAGGAGCCTATCGATG ACCATTTCTTCGAGATTCTCGCCAGAGTCAAACAAGTCTACCGGGACTGT GAAGCATTACTCGGGGGTGAAAACGAGCGACTGGGTCTGGAACTCATGGA AAAGAGCTCAAGAAGCCTCAACTCTGCCTACCAGAAACTCTACAGGTGGA TACAAAAGGAGTTCAGATCTCTCAACCTTGAAGACCCTCGCATCAGTAGC TCTATCAGACGTGTCCTGCGAGTGCTAGCGGAGCGGCCAAGCTTGTTCCA CAGCTGTCTGGATTTCTTCGCAGAGGCCCGAGACTATGTCCTCTCCGATG CCTTCCACTACGCCCTTACTGATGCCGTCTCTGGCACGACGGGTGATACC AACGTGAAGCCAATCGAGTTCTCTGCCCACGACCCCCTTCGGTACATCGG AGACATGCTGGCCTGGGTGCATTCCACCACCGTCTCCGAACGCGAGGCAC TCGAGGCCCTCTTCGTCGCCGACGGCGAAGAGCTTGCCAAAGGAATCCAA GCCGGCCTAAGCAGTGAACCCTGGTCCCGCATCGATGAAGACAAGGAAGT GTCTTTCGACGGACAAAAGGCTCTCAGCGACCTAGTTAATCGCGACCTCA TCGGTGTCTCCCGAGCCCTGCGCCAGCGCGTCGAGCTAGTCATCCAAGGC CACGACGACCCCGTCACCTGCTACAAGGTAGTCAACCTGCTATCCTTCTA CCAAACGACCTTCAGCAAACTCCTCGGCCCTCAATCCAACCTCGCCGAGC TCCTCGAGACCCTCGAAAAGTTCACCTTCAAGCACTTCGAGACCCTCATG CACGACGAAGTCAACAACATCTCAACAGATCACTCAGCCCTCACACCTCC AGCAGATCTCTCCGCACCCCAATTCCTCCAAGACGCCCTGGAAGTCCTCA CCTCTTTGATGAAAACCCACGAGGCCTCCTACGGCGCCGACCCCATCCCC ACCCCCGGCCCTAAAACCACATCATCATCACCACCACCCAAGGACACCAA CTCCGAAAACAAATTCACACCCGTCCTCCACTCTGCCCTCGAACCCTTCC TCGACCTCGCCAAATCCTCTGCCGCCGATCTCCCCTCCCACACCACCCAA ACCATCTACCTAACCAACATCCACCTCACCGTCCGCACAACCATCACCCC CTACCCCTTCGCCAGCACCACCCACCTGTCCCCGATCCAAACAGCCCTCT CTACCCTCCGCACAGACCTCCTCGATATCCAACACCGCTACCTCCTCACC TCCTCGGGTCTCCAGACCCTCCTCGCAGCCCTGGAACCATTCTCCCCTCA ACAACCAACATCCACAGACCAACAGAAGCCCAAACCAAATATATCAGACA TCCTCACCCTCCCGGCCTTCCAGCCGCAGGCACTTATTAATATCAGCCAG CAATTGGACGACTTCCTCCCGAGCGCGCTTATGGATGCTACGGACAACTT GAAACGCGTGGCCAGCGCGACGTTCGTGAAGAGTGTCACGGAGGATGCGG TCGAGGCGTTCTGTCGGGACTTTGAGTTTGTGGAGGGAATGGTTATTGCG GCGGATAATGAGGCAAGGGGGGTGGATGTTGGTGAGAAGGCGGTGGAGGA GGGAGGGGAGGATGAGGAGGGAGTGGAGAAGGGGGGATTGAGGAGGTTGT TCCCTAGGACGACGGGGGAGATTCGGGTTTTGTTGAGTTGA
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Coding sequence (CDS) from alignment at ch8:4348720..4351060-

>KJC3_012708-T1 ID=KJC3_012708-T1|Name=KJC3_012708-T1|organism=Aspergillus niger KJC3|type=CDS|length=4464bp|location=Sequence derived from alignment at ch8:4348720..4351060- (Aspergillus niger KJC3)
CAATTGAAACGGATAGGAACTGTAATTACGAACTTGAATCAGACTTGCGA
TGAGATGCGCAAACATATCGTCTCGGCTAGACAGGAGACAACGCCAGTGC
TCGAGGAAGCGTCGGCTTTGATGAAGCAGAGAAAAGAGGCAGAGACCAAG
CAGGAGCTGCTGGAAGCTTTCACCCAACACTTCATCGTCCCCGATGAGGA
CTTGCTGATCCTGACGCACGCCGAGGAGCCTATCGATGACCATTTCTTCG
AGATTCTCGCCAGAGTCAAACAAGTCTACCGGGACTGTGAAGCATTACTC
GGGGGTGAAAACGAGCGACTGGGTCTGGAACTCATGGAAAAGAGCTCAAG
AAGCCTCAACTCTGCCTACCAGAAACTCTACAGGTGGATACAAAAGGAGT
TCAGATCTCTCAACCTTGAAGACCCTCGCATCAGTAGCTCTATCAGACGT
GTCCTGCGAGTGCTAGCGGAGCGGCCAAGCTTGTTCCACAGCTGTCTGGA
TTTCTTCGCAGAGGCCCGAGACTATGTCCTCTCCGATGCCTTCCACTACG
CCCTTACTGATGCCGTCTCTGGCACGACGGGTGATACCAACGTGAAGCCA
ATCGAGTTCTCTGCCCACGACCCCCTTCGGTACATCGGAGACATGCTGGC
CTGGGTGCATTCCACCACCGTCTCCGAACGCGAGGCACTCGAGGCCCTCT
TCGTCGCCGACGGCGAAGAGCTTGCCAAAGGAATCCAAGCCGGCCTAAGC
AGTGAACCCTGGTCCCGCATCGATGAAGACAAGGAAGTGTCTTTCGACGG
ACAAAAGGCTCTCAGCGACCTAGTTAATCGCGACCTCATCGGTGTCTCCC
GAGCCCTGCGCCAGCGCGTCGAGCTAGTCATCCAAGGCCACGACGACCCC
GTCACCTGCTACAAGGTAGTCAACCTGCTATCCTTCTACCAAACGACCTT
CAGCAAACTCCTCGGCCCTCAATCCAACCTCGCCGAGCTCCTCGAGACCC
TCGAAAAGTTCACCTTCAAGCACTTCGAGACCCTCATGCACGACGAAGTC
AACAACATCTCAACAGATCACTCAGCCCTCACACCTCCAGCAGATCTCTC
CGCACCCCAATTCCTCCAAGACGCCCTGGAAGTCCTCACCTCTTTGATGA
AAACCCACGAGGCCTCCTACGGCGCCGACCCCATCCCCACCCCCGGCCCT
AAAACCACATCATCATCACCACCACCCAAGGACACCAACTCCGAAAACAA
ATTCACACCCGTCCTCCACTCTGCCCTCGAACCCTTCCTCGACCTCGCCA
AATCCTCTGCCGCCGATCTCCCCTCCCACACCACCCAAACCATCTACCTA
ACCAACATCCACCTCACCGTCCGCACAACCATCACCCCCTACCCCTTCGC
CAGCACCACCCACCTGTCCCCGATCCAAACAGCCCTCTCTACCCTCCGCA
CAGACCTCCTCGATATCCAACACCGCTACCTCCTCACCTCCTCGGGTCTC
CAGACCCTCCTCGCAGCCCTGGAACCATTCTCCCCTCAACAACCAACATC
CACAGACCAACAGAAGCCCAAACCAAATATATCAGACATCCTCACCCTCC
CGGCCTTCCAGCCGCAGGCACTTATTAATATCAGCCAGCAATTGGACGAC
TTCCTCCCGAGCGCGCTTATGGATGCTACGGACAACTTGAAACGCGTGGC
CAGCGCGACGTTCGTGAAGAGTGTCACGGAGGATGCGGTCGAGGCGTTCT
GTCGGGACTTTGAGTTTGTGGAGGGAATGGTTATTGCGGCGGATAATGAG
GCAAGGGGGGTGGATGTTGGTGAGAAGGCGGTGGAGGAGGGAGGGGAGGA
TGAGGAGGGAGTGGAGAAGGGGGGATTGAGGAGGTTGTTCCCTAGGACGA
CGGGGGAGATTCGGGTTTTGTTGAGTTGAATGGCGAGCTACTTCCCTCCA
AACGGAGTCATCTCCAGCCATGGCTCTACTCGAGCATCTTCACCAGCTTC
CTCTCCGCTTTCACCCCCGGTACACCAGCGATCCAATGCCTTGTCCAACC
GACTGACAAGTGTACTTTCGGCCTCCTATGCGGACTCGGACATTCGCGAT
GCGCTGGAGACACTCAGCCTCAGGGGGATACACAATACGGCAGAAGTTCG
GAGACAGTTGCGCTTGGATGTTCAGAAGGAAGTCGTCGATAGCAATGCCG
AGATCGTGCGGGATTTCGGGCTCGTTGCGGAGCAATTGAAACGGATAGGA
ACTGTAATTACGAACTTGAATCAGACTTGCGATGAGATGCGCAAACATAT
CGTCTCGGCTAGACAGGAGACAACGCCAGTGCTCGAGGAAGCGTCGGCTT
TGATGAAGCAGAGAAAAGAGGCAGAGACCAAGCAGGAGCTGCTGGAAGCT
TTCACCCAACACTTCATCGTCCCCGATGAGGACTTGCTGATCCTGACGCA
CGCCGAGGAGCCTATCGATGACCATTTCTTCGAGATTCTCGCCAGAGTCA
AACAAGTCTACCGGGACTGTGAAGCATTACTCGGGGGTGAAAACGAGCGA
CTGGGTCTGGAACTCATGGAAAAGAGCTCAAGAAGCCTCAACTCTGCCTA
CCAGAAACTCTACAGGTGGATACAAAAGGAGTTCAGATCTCTCAACCTTG
AAGACCCTCGCATCAGTAGCTCTATCAGACGTGTCCTGCGAGTGCTAGCG
GAGCGGCCAAGCTTGTTCCACAGCTGTCTGGATTTCTTCGCAGAGGCCCG
AGACTATGTCCTCTCCGATGCCTTCCACTACGCCCTTACTGATGCCGTCT
CTGGCACGACGGGTGATACCAACGTGAAGCCAATCGAGTTCTCTGCCCAC
GACCCCCTTCGGTACATCGGAGACATGCTGGCCTGGGTGCATTCCACCAC
CGTCTCCGAACGCGAGGCACTCGAGGCCCTCTTCGTCGCCGACGGCGAAG
AGCTTGCCAAAGGAATCCAAGCCGGCCTAAGCAGTGAACCCTGGTCCCGC
ATCGATGAAGACAAGGAAGTGTCTTTCGACGGACAAAAGGCTCTCAGCGA
CCTAGTTAATCGCGACCTCATCGGTGTCTCCCGAGCCCTGCGCCAGCGCG
TCGAGCTAGTCATCCAAGGCCACGACGACCCCGTCACCTGCTACAAGGTA
GTCAACCTGCTATCCTTCTACCAAACGACCTTCAGCAAACTCCTCGGCCC
TCAATCCAACCTCGCCGAGCTCCTCGAGACCCTCGAAAAGTTCACCTTCA
AGCACTTCGAGACCCTCATGCACGACGAAGTCAACAACATCTCAACAGAT
CACTCAGCCCTCACACCTCCAGCAGATCTCTCCGCACCCCAATTCCTCCA
AGACGCCCTGGAAGTCCTCACCTCTTTGATGAAAACCCACGAGGCCTCCT
ACGGCGCCGACCCCATCCCCACCCCCGGCCCTAAAACCACATCATCATCA
CCACCACCCAAGGACACCAACTCCGAAAACAAATTCACACCCGTCCTCCA
CTCTGCCCTCGAACCCTTCCTCGACCTCGCCAAATCCTCTGCCGCCGATC
TCCCCTCCCACACCACCCAAACCATCTACCTAACCAACATCCACCTCACC
GTCCGCACAACCATCACCCCCTACCCCTTCGCCAGCACCACCCACCTGTC
CCCGATCCAAACAGCCCTCTCTACCCTCCGCACAGACCTCCTCGATATCC
AACACCGCTACCTCCTCACCTCCTCGGGTCTCCAGACCCTCCTCGCAGCC
CTGGAACCATTCTCCCCTCAACAACCAACATCCACAGACCAACAGAAGCC
CAAACCAAATATATCAGACATCCTCACCCTCCCGGCCTTCCAGCCGCAGG
CACTTATTAATATCAGCCAGCAATTGGACGACTTCCTCCCGAGCGCGCTT
ATGGATGCTACGGACAACTTGAAACGCGTGGCCAGCGCGACGTTCGTGAA
GAGTGTCACGGAGGATGCGGTCGAGGCGTTCTGTCGGGACTTTGAGTTTG
TGGAGGGAATGGTTATTGCGGCGGATAATGAGGCAAGGGGGGTGGATGTT
GGTGAGAAGGCGGTGGAGGAGGGAGGGGAGGATGAGGAGGGAGTGGAGAA
GGGGGGATTGAGGAGGTTGTTCCCTAGGACGACGGGGGAGATTCGGGTTT
TGTTGAGTTGAATGGCGAGCTACTTCCCTCCAAACGGAGTCATCTCCAGC
CATGGCTCTACTCGAGCATCTTCACCAGCTTCCTCTCCGCTTTCACCCCC
GGTACACCAGCGATCCAATGCCTTGTCCAACCGACTGACAAGTGTACTTT
CGGCCTCCTATGCGGACTCGGACATTCGCGATGCGCTGGAGACACTCAGC
CTCAGGGGGATACACAATACGGCAGAAGTTCGGAGACAGTTGCGCTTGGA
TGTTCAGAAGGAAGTCGTCGATAGCAATGCCGAGATCGTGCGGGATTTCG
GGCTCGTTGCGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0017119Golgi transport complex
Vocabulary: Biological Process
TermDefinition
GO:0006891intra-Golgi vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COG6KJC3_012708Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012708-T1KJC3_012708-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012708-T1.cdsKJC3_012708-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012708-T1.exon2KJC3_012708-T1.exon2Aspergillus niger KJC3exon
KJC3_012708-T1.exon1KJC3_012708-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012708-T1.utr5p1KJC3_012708-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09260KCB
DBxrefInterPro:IPR010490
DBxrefPFAM:PF06419
ProductGolgi transport complex subunit 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4348720..4351060 -