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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4353447..4355575+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012711-T1 ID=KJC3_012711-T1|Name=KJC3_012711-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2129bp|location=Sequence derived from alignment at ch8:4353447..4355575+ (Aspergillus niger KJC3)
TGTCCTGCCTGACGCTCTCCCTCTCTTCGTCCTTCCAATGCGTTTGGCGC
CAACACTCTCTCTCGTTAGGTCTGCTGGACCACCATGTTGATCGGCTCTA
TATCTATTTGCTCTGTTTTTCTTTGCGATTTTGATCTACCGTTTTTCGTT
TGTGCTTGACGTTCTCTGCGAGCCCGTCGGTTTGTGATTATCTCTGGAGG
CAACCCCGCTCGCCTTATCAATCACTGCTCCAGCTACTGCCGGGCACACA
TCACCATCATTGCACCCCAATTCCGCCCTCATACCTGTAATGCCATCATC
GTTTGAATCAGCTTCAAATTGGGATTTCACTCCGGTGATCAATCTCCTCC
GCACCCCGACCTACGGCACTGGTAGCTCATCGGTTCCTTATCGCCACCCG
GAGTCCGCCTCAATTGCTCGGCCTACTTGGGAGACAAACAACAACGATGG
CTCCTCTTCCTCTAATGATGTGCGCGAGGTAAGGCCTGGTGAAGGAGCCC
CTCCGAAGCTAGGAGACTTTGGTTCTCTCTGGGAGCTTTTAGGCAGTACT
GGCATCTCGGCCATTCGCCCACCAGTTGAACCGTGTGATATCCCGCGGAA
CACGCCTACTCCCACGCCACAATCGCCTAAACGTATCGAAATTCTCAAAC
GACCTTTGAGTAACCATGTCGACTCCGCAGACTTGGATGAGGTGCTTCCT
CGCACCCCATCAAAGCCTATACCTGTCTCCGGTGTCTCCAAGTCCCGCAA
CTTGCAGGCCAAGACCGCAGCCGGGAAACGAGCTCCTAATAAACCAGATA
CTACACTGAGTAAGCATGCAGATGAGTCTTGCACATCGGAGAGCGCTGTG
GAAGCCGAGTCCGATGGCAACCTCAGCGTCTTCGATCCCCCTCTGCCTAA
GAGTGGAGGCACTCCGTCGCTGGTCCCTCCGCAGGTCGGCACGGCGGGTG
CCATGTGTGATCCATATGAGACGCCGCCTTCCTCCTACGATGAGTCTGTA
GAAACACCTCCCCCGAAGACTGTGAAGAACCCTCACAGCTCTGGCACGCT
ACGCGTGCAGCCTGTCGCATACAAATCTACGGCTGATCGGAGGATTGGTC
TCTTGACTAAGCTTTTGAAGAACTTCCCCGACTATGCAGATGCCGTAACC
CAGGTTGGACGGCCTTTGATTCCTAAAAAGACGGACGTTACACGCCGCCC
CATCCATGTCTTTGTTGACATGTCTAATGTATGTATGACCTGACAACAGT
TGGGTGTTTGTACTAACTGGGCCAGATTATGGTTGGGTTTCACGATACGG
TGAAGCTATCGCGCAAAATTCCGGTGAAAACGCGGATCCGTCGATTGCCT
TTGTCATTCCAGAACTTCTCCCTAATCCTCGAGCGTGGCCGGCCCACCGC
CAAACGAGTCTTGGTGGGCTCGGATCGATTTGCAGCCATCACTGAAGGCG
AACAACTTGGTTACGAAGCCAACATTCTCGACCGGGTCCACAAGGTCAAG
CATATGACTCCTCGCCAAATGCGATTTCGTAAGAATCCTCGAGCTGGCGC
TCACGACCCTGGTAGCGGTTCAGAAACGAACGAAGCACCAGAGGAACGCT
GGGTCGAGCAGGGTGTGGACGAAATTCTGCATCTGAAGATTCTCGAAAGT
TTGCTAGACACGGGCGAACCGGCAACCATCGTGTTAGCCACGGGAGACGC
GGCGGAAGCCGAATTCTCGGGCGGGTTTATGAAGATGGTGGAGCGGGCGC
TGAGCCGGGGCTGGGCCGTGGAGCTGGTGAGCTTCAGTCAAGTGACGAGC
TATGCCTATCGCCGGAAGGAATTCCGGGCGAAATGGGGGAACCGATTTCG
GATGATTGCGTTGGACGAGTATATTGAGGAGCTGCTTGATATGTAGGGCT
TGGTTTATACTTGGTAGCACTGCATTAGTTGTCGCTGCTTGTTGGCAGGT
CAGATTGTTATTACTTCTTTAGGATGCCGAATTGCTGGTGTTGTTATGAA
GATAATTATCGATGATAGGAGCTTCAGATTAGGATACAACAAATTGAATC
ATTCTCGAGACGACTGCTGAGCTGGGATTCAAGTATGGAAGTATACTGTA
TCCCCTGGAATCCAATATATACAAGCTTC back to topCoding sequence (CDS) from alignment at ch8:4353447..4355575+ >KJC3_012711-T1 ID=KJC3_012711-T1|Name=KJC3_012711-T1|organism=Aspergillus niger KJC3|type=CDS|length=3120bp|location=Sequence derived from alignment at ch8:4353447..4355575+ (Aspergillus niger KJC3)
ATGCCATCATCGTTTGAATCAGCTTCAAATTGGGATTTCACTCCGGTGAT
CAATCTCCTCCGCACCCCGACCTACGGCACTGGTAGCTCATCGGTTCCTT
ATCGCCACCCGGAGTCCGCCTCAATTGCTCGGCCTACTTGGGAGACAAAC
AACAACGATGGCTCCTCTTCCTCTAATGATGTGCGCGAGGTAAGGCCTGG
TGAAGGAGCCCCTCCGAAGCTAGGAGACTTTGGTTCTCTCTGGGAGCTTT
TAGGCAGTACTGGCATCTCGGCCATTCGCCCACCAGTTGAACCGTGTGAT
ATCCCGCGGAACACGCCTACTCCCACGCCACAATCGCCTAAACGTATCGA
AATTCTCAAACGACCTTTGAGTAACCATGTCGACTCCGCAGACTTGGATG
AGGTGCTTCCTCGCACCCCATCAAAGCCTATACCTGTCTCCGGTGTCTCC
AAGTCCCGCAACTTGCAGGCCAAGACCGCAGCCGGGAAACGAGCTCCTAA
TAAACCAGATACTACACTGAGTAAGCATGCAGATGAGTCTTGCACATCGG
AGAGCGCTGTGGAAGCCGAGTCCGATGGCAACCTCAGCGTCTTCGATCCC
CCTCTGCCTAAGAGTGGAGGCACTCCGTCGCTGGTCCCTCCGCAGGTCGG
CACGGCGGGTGCCATGTGTGATCCATATGAGACGCCGCCTTCCTCCTACG
ATGAGTCTGTAGAAACACCTCCCCCGAAGACTGTGAAGAACCCTCACAGC
TCTGGCACGCTACGCGTGCAGCCTGTCGCATACAAATCTACGGCTGATCG
GAGGATTGGTCTCTTGACTAAGCTTTTGAAGAACTTCCCCGACTATGCAG
ATGCCGTAACCCAGGTTGGACGGCCTTTGATTCCTAAAAAGACGGACGTT
ACACGCCGCCCCATCCATGTCTTTGTTGACATGTCTAATATTATGGTTGG
GTTTCACGATACGGTGAAGCTATCGCGCAAAATTCCGGTGAAAACGCGGA
TCCGTCGATTGCCTTTGTCATTCCAGAACTTCTCCCTAATCCTCGAGCGT
GGCCGGCCCACCGCCAAACGAGTCTTGGTGGGCTCGGATCGATTTGCAGC
CATCACTGAAGGCGAACAACTTGGTTACGAAGCCAACATTCTCGACCGGG
TCCACAAGGTCAAGCATATGACTCCTCGCCAAATGCGATTTCGTAAGAAT
CCTCGAGCTGGCGCTCACGACCCTGGTAGCGGTTCAGAAACGAACGAAGC
ACCAGAGGAACGCTGGGTCGAGCAGGGTGTGGACGAAATTCTGCATCTGA
AGATTCTCGAAAGTTTGCTAGACACGGGCGAACCGGCAACCATCGTGTTA
GCCACGGGAGACGCGGCGGAAGCCGAATTCTCGGGCGGGTTTATGAAGAT
GGTGGAGCGGGCGCTGAGCCGGGGCTGGGCCGTGGAGCTGGTGAGCTTCA
GTCAAGTGACGAGCTATGCCTATCGCCGGAAGGAATTCCGGGCGAAATGG
GGGAACCGATTTCGGATGATTGCGTTGGACGAGTATATTGAGGAGCTGCT
TGATATGTAGATGCCATCATCGTTTGAATCAGCTTCAAATTGGGATTTCA
CTCCGGTGATCAATCTCCTCCGCACCCCGACCTACGGCACTGGTAGCTCA
TCGGTTCCTTATCGCCACCCGGAGTCCGCCTCAATTGCTCGGCCTACTTG
GGAGACAAACAACAACGATGGCTCCTCTTCCTCTAATGATGTGCGCGAGG
TAAGGCCTGGTGAAGGAGCCCCTCCGAAGCTAGGAGACTTTGGTTCTCTC
TGGGAGCTTTTAGGCAGTACTGGCATCTCGGCCATTCGCCCACCAGTTGA
ACCGTGTGATATCCCGCGGAACACGCCTACTCCCACGCCACAATCGCCTA
AACGTATCGAAATTCTCAAACGACCTTTGAGTAACCATGTCGACTCCGCA
GACTTGGATGAGGTGCTTCCTCGCACCCCATCAAAGCCTATACCTGTCTC
CGGTGTCTCCAAGTCCCGCAACTTGCAGGCCAAGACCGCAGCCGGGAAAC
GAGCTCCTAATAAACCAGATACTACACTGAGTAAGCATGCAGATGAGTCT
TGCACATCGGAGAGCGCTGTGGAAGCCGAGTCCGATGGCAACCTCAGCGT
CTTCGATCCCCCTCTGCCTAAGAGTGGAGGCACTCCGTCGCTGGTCCCTC
CGCAGGTCGGCACGGCGGGTGCCATGTGTGATCCATATGAGACGCCGCCT
TCCTCCTACGATGAGTCTGTAGAAACACCTCCCCCGAAGACTGTGAAGAA
CCCTCACAGCTCTGGCACGCTACGCGTGCAGCCTGTCGCATACAAATCTA
CGGCTGATCGGAGGATTGGTCTCTTGACTAAGCTTTTGAAGAACTTCCCC
GACTATGCAGATGCCGTAACCCAGGTTGGACGGCCTTTGATTCCTAAAAA
GACGGACGTTACACGCCGCCCCATCCATGTCTTTGTTGACATGTCTAATA
TTATGGTTGGGTTTCACGATACGGTGAAGCTATCGCGCAAAATTCCGGTG
AAAACGCGGATCCGTCGATTGCCTTTGTCATTCCAGAACTTCTCCCTAAT
CCTCGAGCGTGGCCGGCCCACCGCCAAACGAGTCTTGGTGGGCTCGGATC
GATTTGCAGCCATCACTGAAGGCGAACAACTTGGTTACGAAGCCAACATT
CTCGACCGGGTCCACAAGGTCAAGCATATGACTCCTCGCCAAATGCGATT
TCGTAAGAATCCTCGAGCTGGCGCTCACGACCCTGGTAGCGGTTCAGAAA
CGAACGAAGCACCAGAGGAACGCTGGGTCGAGCAGGGTGTGGACGAAATT
CTGCATCTGAAGATTCTCGAAAGTTTGCTAGACACGGGCGAACCGGCAAC
CATCGTGTTAGCCACGGGAGACGCGGCGGAAGCCGAATTCTCGGGCGGGT
TTATGAAGATGGTGGAGCGGGCGCTGAGCCGGGGCTGGGCCGTGGAGCTG
GTGAGCTTCAGTCAAGTGACGAGCTATGCCTATCGCCGGAAGGAATTCCG
GGCGAAATGGGGGAACCGATTTCGGATGATTGCGTTGGACGAGTATATTG
AGGAGCTGCTTGATATGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012711-T1.utr5p1 | KJC3_012711-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012711-T1.utr3p1 | KJC3_012711-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4353447..4355575 + |
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