You are here

Home

KJC3_012733-T1, KJC3_012733-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012733-T1
Unique NameKJC3_012733-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4434141..4434838-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012733-T1 ID=KJC3_012733-T1|Name=KJC3_012733-T1|organism=Aspergillus niger KJC3|type=mRNA|length=698bp|location=Sequence derived from alignment at ch8:4434141..4434838- (Aspergillus niger KJC3)
GCTGATTTTCGAGCTGCATCTACATCTACAATCTAGACAGACACCTTGAA
CAGTATCTCTTAACGCTTTACTCTTTCTCGACCTTCTTAACCTTCGCACT
ACACTCACACAAATCTCATCCACAGATAGCCTACCATGGCATCCAACACA
GTACGTCCACCCTCACCACCCAAACCCAAACTCTCTTCAATCCCACCCTC
TTCTGCATCACCAACTAACTCAAAAACACCCACAGCAACGAATTACCACC
CTCCTCAAACACTGGCCAACAGATAAAGTGCGACCCTCATCCGTCTCCGT
CCAGAACTATCTCCAAGCCTGCCTCCTCCCCTCATCCACCGAACAAACCT
CCCAGAAACAGCCCCAACAAGAAGGCCAATTACAGAAAGTCAACATTGAC
GAGAAATCACTCAACGCGCTATCCTCACTCCTTGAAGACCGGTACGCGAG
ACGGTACCCCCTGTCGCCGAGGTTGCGCAGACCGGCGAGTAACCCGGATC
ATTATGACAATGTGATTCGGGAGTTTGATGAGGCGCCGGATAGGGATTGG
ATGGGGAGGTTGAAGAAGAGGTTGGGTGGGTTGTTGAGGTTGAAATAGGC
TGTATATGGAGTTTAGAGGGCGCTTGGGGGAGAGTAAGGGAGAGTGATGG
TGGCGACCTTTCTTATGGTGTTGTATTAGTACTATGGGATGGCATGGG
back to top

Coding sequence (CDS) from alignment at ch8:4434141..4434838-

>KJC3_012733-T1 ID=KJC3_012733-T1|Name=KJC3_012733-T1|organism=Aspergillus niger KJC3|type=CDS|length=756bp|location=Sequence derived from alignment at ch8:4434141..4434838- (Aspergillus niger KJC3)
CAACGAATTACCACCCTCCTCAAACACTGGCCAACAGATAAAGTGCGACC
CTCATCCGTCTCCGTCCAGAACTATCTCCAAGCCTGCCTCCTCCCCTCAT
CCACCGAACAAACCTCCCAGAAACAGCCCCAACAAGAAGGCCAATTACAG
AAAGTCAACATTGACGAGAAATCACTCAACGCGCTATCCTCACTCCTTGA
AGACCGGTACGCGAGACGGTACCCCCTGTCGCCGAGGTTGCGCAGACCGG
CGAGTAACCCGGATCATTATGACAATGTGATTCGGGAGTTTGATGAGGCG
CCGGATAGGGATTGGATGGGGAGGTTGAAGAAGAGGTTGGGTGGGTTGTT
GAGGTTGAAATAGATGGCATCCAACACACAACGAATTACCACCCTCCTCA
AACACTGGCCAACAGATAAAGTGCGACCCTCATCCGTCTCCGTCCAGAAC
TATCTCCAAGCCTGCCTCCTCCCCTCATCCACCGAACAAACCTCCCAGAA
ACAGCCCCAACAAGAAGGCCAATTACAGAAAGTCAACATTGACGAGAAAT
CACTCAACGCGCTATCCTCACTCCTTGAAGACCGGTACGCGAGACGGTAC
CCCCTGTCGCCGAGGTTGCGCAGACCGGCGAGTAACCCGGATCATTATGA
CAATGTGATTCGGGAGTTTGATGAGGCGCCGGATAGGGATTGGATGGGGA
GGTTGAAGAAGAGGTTGGGTGGGTTGTTGAGGTTGAAATAGATGGCATCC
AACACA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012733KJC3_012733Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012733-T1KJC3_012733-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012733-T1.cdsKJC3_012733-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012733-T1.utr3p1KJC3_012733-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012733-T1.exon2KJC3_012733-T1.exon2Aspergillus niger KJC3exon
KJC3_012733-T1.exon1KJC3_012733-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012733-T1.utr5p1KJC3_012733-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8.9
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4434141..4434838 -
Powered by Drupal