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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:4472193..4473734- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012741-T1 ID=KJC3_012741-T1|Name=KJC3_012741-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1542bp|location=Sequence derived from alignment at ch8:4472193..4473734- (Aspergillus niger KJC3)
CGGCCATCCACAGCCCTGGAAAGCATCCAGGAAATGGCCGTCCCTATCCA
CTGATCGGCTGGCTGCGACGCCTGCATGGCTATTTTGCTGCCTTCGCTCC
AACAAACTCTGTCGAGTCTCCCTCCGCTTTATATCACGGGAGACCCTGCC
CTAAGCCTTACGGTTTCTCACCAATCTTCTGGTCTAATACCCCAGTGAAT
CCATCTGCCTAACCCGCTTACACCAAACCCTATACTTCCTGGGTTCTCAA
CTATACGAGTTAATCGCTTTTATATACATACTAAGCCCTTTGTATCAGAC
TGCCCCAATATGGGCTTCGGCGGCGTTCTTTTGCGCGCTTCCAACCTCTC
CATCCGTGTTCTCCAATTCCTCGCCGCAGCTGTCATTCTCGGCATCTTTT
CCTACTTTCTTGCTGTCCTTTCTCGACATGACCAGGATATCCCGCGCTGG
ATGAAAGCCGTCGAGGGTCTGTCCGGCGCTGCGACCCTCTATGGCATCCT
CGGTATCCTATTCACTTGCTGCCTTGGCGGCGTCGCCTTCTTCGCCTTCC
TCGCCATTGTCCTCGATGTCTGCTTCATCGGTGCCATGGTCGCCATTGCT
ATCATGACCCGTCATGGCACGCAAAGCTGCTCTGGTCGCGTGACCACCCC
TCTCGGGTCTGGTAATAGCAGTGATGACTCACCGTCAGGGACAAGCTATG
GCTACGCCTGCGAACTGGAGAAAGCCTCCTTTGCGGTGTCCATTATTGGG
ATGTAGGTTCCTTCCTTCACCTACCCAGACCCTTCCTTCCTTGGCCGATC
TTAAGGGCAACTAATGTAAAACTTTATGTGATGCTAACAGCCCGTGTACA
GCGTCTTCTTCCTGATCTCAATTCTTCTTCAAGTCCTCTACGCCCGATAT
CACAAGCACGAGAAGCGCTTTGGCCCCTCCCCCGCAAACGGCTACACCTC
CGGCACTACCCGGGGCTTCGCTTTCTGGAGAAGAAACAAGAACAACCCCG
ACACTGCTAGTGCTGATGACATGCTGCCTTCGCATCCATTGCCCAGGGAT
GTGGAGCTTGGTGCGAACGGCACAACGGCAGCAGAGAAGGAAGATGGCTT
GAATGGTACCAATGTCGGCGCTACTACCGGCAGTGGTGGATATATGCCGT
GGAGAAGCAATGTGAATGGTGGTACTACCACTGCGGGACAGACTGGGACT
TACGGATATGGAAATTCGGCATATACGGGGAATTATTAAAGGGTGAGATG
CAAGGGGTGCTAGGAGGTATGTGGTATGTACAGACATACCAGGCATGACA
CAGAGGGGTGTGATGACCTCCCCCAAATGTGGCAGTCGCGGAGAAAGTGA
CGAATAATGAATTGACTCGACTAAAAGATACCATGGTTTTTTTTTTGGGT
TGCTGGATGGAGTGGTTTGATATTGCAAAGTACATACTGTTTTGGTTCAT
ATTTGTGATAAACACTACAAAGGATTTGGCTATAGCTGTGGGTACTGAAT
CTGTTGCACCTGACAATAGATGTAATAATCGTTAAACCTGTG back to topCoding sequence (CDS) from alignment at ch8:4472193..4473734- >KJC3_012741-T1 ID=KJC3_012741-T1|Name=KJC3_012741-T1|organism=Aspergillus niger KJC3|type=CDS|length=1662bp|location=Sequence derived from alignment at ch8:4472193..4473734- (Aspergillus niger KJC3)
CGTCTTCTTCCTGATCTCAATTCTTCTTCAAGTCCTCTACGCCCGATATC
ACAAGCACGAGAAGCGCTTTGGCCCCTCCCCCGCAAACGGCTACACCTCC
GGCACTACCCGGGGCTTCGCTTTCTGGAGAAGAAACAAGAACAACCCCGA
CACTGCTAGTGCTGATGACATGCTGCCTTCGCATCCATTGCCCAGGGATG
TGGAGCTTGGTGCGAACGGCACAACGGCAGCAGAGAAGGAAGATGGCTTG
AATGGTACCAATGTCGGCGCTACTACCGGCAGTGGTGGATATATGCCGTG
GAGAAGCAATGTGAATGGTGGTACTACCACTGCGGGACAGACTGGGACTT
ACGGATATGGAAATTCGGCATATACGGGGAATTATTAAATGGGCTTCGGC
GGCGTTCTTTTGCGCGCTTCCAACCTCTCCATCCGTGTTCTCCAATTCCT
CGCCGCAGCTGTCATTCTCGGCATCTTTTCCTACTTTCTTGCTGTCCTTT
CTCGACATGACCAGGATATCCCGCGCTGGATGAAAGCCGTCGAGGGTCTG
TCCGGCGCTGCGACCCTCTATGGCATCCTCGGTATCCTATTCACTTGCTG
CCTTGGCGGCGTCGCCTTCTTCGCCTTCCTCGCCATTGTCCTCGATGTCT
GCTTCATCGGTGCCATGGTCGCCATTGCTATCATGACCCGTCATGGCACG
CAAAGCTGCTCTGGTCGCGTGACCACCCCTCTCGGGTCTGGTAATAGCAG
TGATGACTCACCGTCAGGGACAAGCTATGGCTACGCCTGCGAACTGGAGA
AAGCCTCCTTTGCGGTGTCCATTATTGGGATCGTCTTCTTCCTGATCTCA
ATTCTTCTTCAAGTCCTCTACGCCCGATATCACAAGCACGAGAAGCGCTT
TGGCCCCTCCCCCGCAAACGGCTACACCTCCGGCACTACCCGGGGCTTCG
CTTTCTGGAGAAGAAACAAGAACAACCCCGACACTGCTAGTGCTGATGAC
ATGCTGCCTTCGCATCCATTGCCCAGGGATGTGGAGCTTGGTGCGAACGG
CACAACGGCAGCAGAGAAGGAAGATGGCTTGAATGGTACCAATGTCGGCG
CTACTACCGGCAGTGGTGGATATATGCCGTGGAGAAGCAATGTGAATGGT
GGTACTACCACTGCGGGACAGACTGGGACTTACGGATATGGAAATTCGGC
ATATACGGGGAATTATTAAATGGGCTTCGGCGGCGTTCTTTTGCGCGCTT
CCAACCTCTCCATCCGTGTTCTCCAATTCCTCGCCGCAGCTGTCATTCTC
GGCATCTTTTCCTACTTTCTTGCTGTCCTTTCTCGACATGACCAGGATAT
CCCGCGCTGGATGAAAGCCGTCGAGGGTCTGTCCGGCGCTGCGACCCTCT
ATGGCATCCTCGGTATCCTATTCACTTGCTGCCTTGGCGGCGTCGCCTTC
TTCGCCTTCCTCGCCATTGTCCTCGATGTCTGCTTCATCGGTGCCATGGT
CGCCATTGCTATCATGACCCGTCATGGCACGCAAAGCTGCTCTGGTCGCG
TGACCACCCCTCTCGGGTCTGGTAATAGCAGTGATGACTCACCGTCAGGG
ACAAGCTATGGCTACGCCTGCGAACTGGAGAAAGCCTCCTTTGCGGTGTC
CATTATTGGGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012741-T1.utr3p1 | KJC3_012741-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012741-T1.utr5p1 | KJC3_012741-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.9 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:4472193..4473734 - |
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