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KJC3_012745-T1, KJC3_012745-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012745-T1
Unique NameKJC3_012745-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4477003..4477972-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012745-T1 ID=KJC3_012745-T1|Name=KJC3_012745-T1|organism=Aspergillus niger KJC3|type=mRNA|length=970bp|location=Sequence derived from alignment at ch8:4477003..4477972- (Aspergillus niger KJC3)
TTCATGTGTCTGTACCTACTGTAAATATCCATCTTAATTGTCTATCAACT
CAATCAACTCCATCGATCTTATCTCTTCCAATCATTCCCACCAATACAAT
CACAAAATGGAAGATCCAGGTGCGTCCTTTTCACCCATCCTCATGGTCCC
GTACCTGTACAACCTCACCACCACCATCACCCAGTTAAGACTAATCTAGA
TAAGGATCACAGCATCTGAAATCACCCCCATAATCCATCATCTCACGCAA
GCCCCGCCAGATGACCAACAACGCACCATCCAGAAATACTTCACTCCCAG
CGCAGCCTTCATCCATCCCTTCTGTCGTGTCTGGCCCTACCCAGGAAGTC
GCTGGTTCATCGAGAAGATCTACCAATGGTATAAGATCATGTCGCCGCGA
ATTGATCTGGAGGTGCATTCCGTTGGTAGGTGATCGTACTTCATCCACCT
CAAATATTTGTTTTTCAAGGAATCGCCAAAGGAATCGCTGACATTTGAAA
TCTATCAAATAGCATACGATAAACCCAACCAAAAGCTCTACCTCCAAATT
TCCCAGCTCTTCTCCATCTGGGCGATACCCTTCCACCATGCCCATGTACA
TCTGACCACGGTCTTGGACCTCACCACGGACAGCGAAGATAACCGTACAC
CGAGGACAGGGTCCGGCAAACGGTACTACATCAAGCAGCAGGAGGACTTT
TATCAGACGTCGGAGTTTGTCAAGTTTGTGGCGCCGTGGGGAGGCGGCTT
GCTGGTTACTATTTGGCAGTTGCTGGCGACGGTGTTTTGTGTATTTGGGG
TGGTGCTGCTTTGGCCGGTGTTGTGGTTAGAGGAGAAGCGGTTGGTGGGG
AATGGAAAGAAATGAGATGATATGTGTGAGACGAGGTACATTGGATTGTA
CGGAGTTTTGGTGTATATATCTGGATATATGAGGATACGTGACGTATATT
TAATATTGGTTCTAACAGGG
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Coding sequence (CDS) from alignment at ch8:4477003..4477972-

>KJC3_012745-T1 ID=KJC3_012745-T1|Name=KJC3_012745-T1|organism=Aspergillus niger KJC3|type=CDS|length=1737bp|location=Sequence derived from alignment at ch8:4477003..4477972- (Aspergillus niger KJC3)
CATACGATAAACCCAACCAAAAGCTCTACCTCCAAATTTCCCAGCTCTTC
TCCATCTGGGCGATACCCTTCCACCATGCCCATGTACATCTGACCACGGT
CTTGGACCTCACCACGGACAGCGAAGATAACCGTACACCGAGGACAGGGT
CCGGCAAACGGTACTACATCAAGCAGCAGGAGGACTTTTATCAGACGTCG
GAGTTTGTCAAGTTTGTGGCGCCGTGGGGAGGCGGCTTGCTGGTTACTAT
TTGGCAGTTGCTGGCGACGGTGTTTTGTGTATTTGGGGTGGTGCTGCTTT
GGCCGGTGTTGTGGTTAGAGGAGAAGCGGTTGGTGGGGAATGGAAAGAAA
TGACATCTGAAATCACCCCCATAATCCATCATCTCACGCAAGCCCCGCCA
GATGACCAACAACGCACCATCCAGAAATACTTCACTCCCAGCGCAGCCTT
CATCCATCCCTTCTGTCGTGTCTGGCCCTACCCAGGAAGTCGCTGGTTCA
TCGAGAAGATCTACCAATGGTATAAGATCATGTCGCCGCGAATTGATCTG
GAGGTGCATTCCGTTGATGGAAGATCCAGCATACGATAAACCCAACCAAA
AGCTCTACCTCCAAATTTCCCAGCTCTTCTCCATCTGGGCGATACCCTTC
CACCATGCCCATGTACATCTGACCACGGTCTTGGACCTCACCACGGACAG
CGAAGATAACCGTACACCGAGGACAGGGTCCGGCAAACGGTACTACATCA
AGCAGCAGGAGGACTTTTATCAGACGTCGGAGTTTGTCAAGTTTGTGGCG
CCGTGGGGAGGCGGCTTGCTGGTTACTATTTGGCAGTTGCTGGCGACGGT
GTTTTGTGTATTTGGGGTGGTGCTGCTTTGGCCGGTGTTGTGGTTAGAGG
AGAAGCGGTTGGTGGGGAATGGAAAGAAATGACATCTGAAATCACCCCCA
TAATCCATCATCTCACGCAAGCCCCGCCAGATGACCAACAACGCACCATC
CAGAAATACTTCACTCCCAGCGCAGCCTTCATCCATCCCTTCTGTCGTGT
CTGGCCCTACCCAGGAAGTCGCTGGTTCATCGAGAAGATCTACCAATGGT
ATAAGATCATGTCGCCGCGAATTGATCTGGAGGTGCATTCCGTTGATGGA
AGATCCAGCATACGATAAACCCAACCAAAAGCTCTACCTCCAAATTTCCC
AGCTCTTCTCCATCTGGGCGATACCCTTCCACCATGCCCATGTACATCTG
ACCACGGTCTTGGACCTCACCACGGACAGCGAAGATAACCGTACACCGAG
GACAGGGTCCGGCAAACGGTACTACATCAAGCAGCAGGAGGACTTTTATC
AGACGTCGGAGTTTGTCAAGTTTGTGGCGCCGTGGGGAGGCGGCTTGCTG
GTTACTATTTGGCAGTTGCTGGCGACGGTGTTTTGTGTATTTGGGGTGGT
GCTGCTTTGGCCGGTGTTGTGGTTAGAGGAGAAGCGGTTGGTGGGGAATG
GAAAGAAATGACATCTGAAATCACCCCCATAATCCATCATCTCACGCAAG
CCCCGCCAGATGACCAACAACGCACCATCCAGAAATACTTCACTCCCAGC
GCAGCCTTCATCCATCCCTTCTGTCGTGTCTGGCCCTACCCAGGAAGTCG
CTGGTTCATCGAGAAGATCTACCAATGGTATAAGATCATGTCGCCGCGAA
TTGATCTGGAGGTGCATTCCGTTGATGGAAGATCCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012745KJC3_012745Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012745-T1KJC3_012745-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012745-T1.cdsKJC3_012745-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012745-T1.utr3p1KJC3_012745-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012745-T1.exon3KJC3_012745-T1.exon3Aspergillus niger KJC3exon
KJC3_012745-T1.exon2KJC3_012745-T1.exon2Aspergillus niger KJC3exon
KJC3_012745-T1.exon1KJC3_012745-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012745-T1.utr5p1KJC3_012745-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8.9
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4477003..4477972 -
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